RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 RFKQ969G6 155 aa10.03□□□□□ -0.8
NKX3-1-202ENST00000523261 NRBF2Q96F24 287 aa10.03□□□□□ -0.8
NKX3-1-202ENST00000523261 NDUFAF3Q9BU61 184 aa10.03□□□□□ -0.8
NKX3-1-202ENST00000523261 SCRT1Q9BWW7 348 aa10.03□□□□□ -0.8
NKX3-1-202ENST00000523261 S4R3C0 116 aa10.03□□□□□ -0.8
NKX3-1-202ENST00000523261 DEFB131BA0A096LNP1 70 aa10.02□□□□□ -0.81
NKX3-1-202ENST00000523261 IGHV4-28A0A0C4DH34 117 aa10.02□□□□□ -0.81
NKX3-1-202ENST00000523261 E9PI62 339 aa10.02□□□□□ -0.81
NKX3-1-202ENST00000523261 PDCD6O75340 191 aa10.02□□□□□ -0.81
NKX3-1-202ENST00000523261 CA1P00915 261 aaPredicted RBP10.02□□□□□ -0.81
NKX3-1-202ENST00000523261 BDKRB2P30411 391 aa10.02□□□□□ -0.81
NKX3-1-202ENST00000523261 ELLP55199 621 aaPredicted RBP10.02□□□□□ -0.81
NKX3-1-202ENST00000523261 TMEM187Q14656 261 aa10.02□□□□□ -0.81
NKX3-1-202ENST00000523261 C19orf35Q6ZS72 473 aa10.02□□□□□ -0.81
NKX3-1-202ENST00000523261 EDARADDQ8WWZ3 215 aa10.02□□□□□ -0.81
NKX3-1-202ENST00000523261 CHRDL1Q9BU40 450 aa10.02□□□□□ -0.81
NKX3-1-202ENST00000523261 SELENOIQ9C0D9 397 aa10.02□□□□□ -0.81
NKX3-1-202ENST00000523261 BANF2Q9H503 90 aa10.02□□□□□ -0.81
NKX3-1-202ENST00000523261 TAGLN3Q9UI15 199 aa10.02□□□□□ -0.81
NKX3-1-202ENST00000523261 PPP3R1P63098 170 aa10.01□□□□□ -0.81
NKX3-1-202ENST00000523261 LAMTOR1Q6IAA8 161 aa10.01□□□□□ -0.81
NKX3-1-202ENST00000523261 SVOPQ8N4V2 548 aa10.01□□□□□ -0.81
NKX3-1-202ENST00000523261 ACBD7Q8N6N7 88 aa10.01□□□□□ -0.81
NKX3-1-202ENST00000523261 ACOT12Q8WYK0 555 aa10.01□□□□□ -0.81
NKX3-1-202ENST00000523261 Q96M66 194 aa10.01□□□□□ -0.81
NKX3-1-202ENST00000523261 ZNF184Q99676 751 aaPredicted RBP10.01□□□□□ -0.81
NKX3-1-202ENST00000523261 SPIN2AQ99865 258 aa10.01□□□□□ -0.81
NKX3-1-202ENST00000523261 SPIN2BQ9BPZ2 258 aa10.01□□□□□ -0.81
NKX3-1-202ENST00000523261 OR1A1Q9P1Q5 309 aa10.01□□□□□ -0.81
NKX3-1-202ENST00000523261 UFC1Q9Y3C8 167 aa10.01□□□□□ -0.81
NKX3-1-202ENST00000523261 AGRNO00468 2067 aa10□□□□□ -0.81
NKX3-1-202ENST00000523261 M0R1X1 148 aa10□□□□□ -0.81
NKX3-1-202ENST00000523261 CD2P06729 351 aa10□□□□□ -0.81
NKX3-1-202ENST00000523261 MYOD1P15172 320 aa10□□□□□ -0.81
NKX3-1-202ENST00000523261 MGMTP16455 207 aa10□□□□□ -0.81
NKX3-1-202ENST00000523261 CEACAM6P40199 344 aa10□□□□□ -0.81
NKX3-1-202ENST00000523261 GLIPR1L1Q6UWM5 242 aa10□□□□□ -0.81
NKX3-1-202ENST00000523261 IDO2Q6ZQW0 420 aa10□□□□□ -0.81
NKX3-1-202ENST00000523261 UBE2DNLQ8IWF7 75 aa10□□□□□ -0.81
NKX3-1-202ENST00000523261 ARHGAP24Q8N264 748 aa10□□□□□ -0.81
NKX3-1-202ENST00000523261 CENPSQ8N2Z9 138 aa10□□□□□ -0.81
NKX3-1-202ENST00000523261 TEX45Q8NA69 505 aa10□□□□□ -0.81
NKX3-1-202ENST00000523261 OR8J1Q8NGP2 316 aa10□□□□□ -0.81
NKX3-1-202ENST00000523261 PTX4Q96A99 478 aa10□□□□□ -0.81
NKX3-1-202ENST00000523261 ORAI1Q96D31 301 aa10□□□□□ -0.81
NKX3-1-202ENST00000523261 FANCD2OSQ96PS1 177 aa10□□□□□ -0.81
NKX3-1-202ENST00000523261 ZNF221Q9UK13 617 aa10□□□□□ -0.81
NKX3-1-202ENST00000523261 ZNF257Q9Y2Q1 563 aa10□□□□□ -0.81
NKX3-1-202ENST00000523261 NACAE9PAV3 2078 aa10□□□□□ -0.81
NKX3-1-202ENST00000523261 ELOA3CA0A087WX78 387 aaPredicted RBP9.99□□□□□ -0.81
NKX3-1-202ENST00000523261 IFNA21P01568 189 aa9.99□□□□□ -0.81
NKX3-1-202ENST00000523261 IFNA17P01571 189 aa9.99□□□□□ -0.81
NKX3-1-202ENST00000523261 PSMB6P28072 239 aa9.99□□□□□ -0.81
NKX3-1-202ENST00000523261 UBE2KP61086 200 aa9.99□□□□□ -0.81
NKX3-1-202ENST00000523261 C10orf55Q5SWW7 151 aa9.99□□□□□ -0.81
NKX3-1-202ENST00000523261 ZNF880Q6PDB4 577 aa9.99□□□□□ -0.81
NKX3-1-202ENST00000523261 SLC25A42Q86VD7 318 aa9.99□□□□□ -0.81
NKX3-1-202ENST00000523261 MUL1Q969V5 352 aa9.99□□□□□ -0.81
NKX3-1-202ENST00000523261 EEF1AKMT3Q96AZ1 226 aa9.99□□□□□ -0.81
NKX3-1-202ENST00000523261 C18orf15Q96N68 181 aa9.99□□□□□ -0.81
NKX3-1-202ENST00000523261 IGHV3-35A0A0C4DH35 117 aa9.98□□□□□ -0.81
NKX3-1-202ENST00000523261 NAPSAO96009 420 aa9.98□□□□□ -0.81
NKX3-1-202ENST00000523261 ZBTB25P24278 435 aa9.98□□□□□ -0.81
NKX3-1-202ENST00000523261 C12orf74Q32Q52 190 aa9.98□□□□□ -0.81
NKX3-1-202ENST00000523261 VMA21Q3ZAQ7 101 aa9.98□□□□□ -0.81
NKX3-1-202ENST00000523261 ZNF767PQ75MW2 155 aa9.98□□□□□ -0.81
NKX3-1-202ENST00000523261 ZNF367Q7RTV3 350 aa9.98□□□□□ -0.81
NKX3-1-202ENST00000523261 CEACAM19Q7Z692 300 aa9.98□□□□□ -0.81
NKX3-1-202ENST00000523261 LHFPL3Q86UP9 236 aa9.98□□□□□ -0.81
NKX3-1-202ENST00000523261 SYS1Q8N2H4 156 aa9.98□□□□□ -0.81
NKX3-1-202ENST00000523261 GPR148Q8TDV2 347 aa9.98□□□□□ -0.81
NKX3-1-202ENST00000523261 CCDC124Q96CT7 223 aaKnown RBP9.98□□□□□ -0.81
NKX3-1-202ENST00000523261 ZNF430Q9H8G1 570 aaPredicted RBP9.98□□□□□ -0.81
NKX3-1-202ENST00000523261 HMX3A6NHT5 357 aa9.97□□□□□ -0.81
NKX3-1-202ENST00000523261 AQP12BA6NM10 295 aa9.97□□□□□ -0.81
NKX3-1-202ENST00000523261 CRTAPO75718 401 aaPredicted RBP9.97□□□□□ -0.81
NKX3-1-202ENST00000523261 CLEC3BP05452 202 aa9.97□□□□□ -0.81
NKX3-1-202ENST00000523261 CTSDP07339 412 aaPredicted RBP9.97□□□□□ -0.81
NKX3-1-202ENST00000523261 MIFP14174 115 aa9.97□□□□□ -0.81
NKX3-1-202ENST00000523261 HOXB6P17509 224 aaKnown RBP9.97□□□□□ -0.81
NKX3-1-202ENST00000523261 IGFBP3P17936 291 aaPredicted RBP9.97□□□□□ -0.81
NKX3-1-202ENST00000523261 POLR2IP36954 125 aaKnown RBP9.97□□□□□ -0.81
NKX3-1-202ENST00000523261 SNRPGP62308 76 aaKnown RBP9.97□□□□□ -0.81
NKX3-1-202ENST00000523261 KDM4DQ6B0I6 523 aa9.97□□□□□ -0.81
NKX3-1-202ENST00000523261 AQP12AQ8IXF9 295 aa9.97□□□□□ -0.81
NKX3-1-202ENST00000523261 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.97□□□□□ -0.81
NKX3-1-202ENST00000523261 MRPL48Q96GC5 212 aaKnown RBP9.97□□□□□ -0.81
NKX3-1-202ENST00000523261 FAAP24Q9BTP7 215 aa9.97□□□□□ -0.81
NKX3-1-202ENST00000523261 ZNF436Q9C0F3 470 aaPredicted RBP9.97□□□□□ -0.81
NKX3-1-202ENST00000523261 CELA1Q9UNI1 258 aa9.97□□□□□ -0.81
NKX3-1-202ENST00000523261 C15orf61A6NNL5 157 aa9.96□□□□□ -0.82
NKX3-1-202ENST00000523261 NPIPB5A8MRT5 1133 aa9.96□□□□□ -0.82
NKX3-1-202ENST00000523261 TEX22C9J3V5 150 aa9.96□□□□□ -0.82
NKX3-1-202ENST00000523261 DYNC1I1O14576 645 aa9.96□□□□□ -0.82
NKX3-1-202ENST00000523261 FKBP6O75344 327 aa9.96□□□□□ -0.82
NKX3-1-202ENST00000523261 ACTL6BO94805 426 aa9.96□□□□□ -0.82
NKX3-1-202ENST00000523261 GSTT2P0CG29 244 aa9.96□□□□□ -0.82
NKX3-1-202ENST00000523261 GSTT2BP0CG30 244 aa9.96□□□□□ -0.82
NKX3-1-202ENST00000523261 MRPL28Q13084 256 aaKnown RBP9.96□□□□□ -0.82
NKX3-1-202ENST00000523261 CBX3Q13185 183 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms