RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 RBP4P02753 201 aa12.21□□□□□ -0.45
CSGALNACT1-211ENST00000522854 OR1S1Q8NH92 325 aa12.21□□□□□ -0.45
CSGALNACT1-211ENST00000522854 RRNAD1Q96FB5 475 aaKnown RBP12.21□□□□□ -0.45
CSGALNACT1-211ENST00000522854 SIRPDQ9H106 197 aa12.21□□□□□ -0.45
CSGALNACT1-211ENST00000522854 TET2Q6N021 2002 aaPredicted RBP12.21□□□□□ -0.45
CSGALNACT1-211ENST00000522854 ITPR3Q14573 2671 aa12.21□□□□□ -0.45
CSGALNACT1-211ENST00000522854 TSC22D2O75157 780 aa12.21□□□□□ -0.46
CSGALNACT1-211ENST00000522854 B3GALNT1O75752 331 aa12.21□□□□□ -0.46
CSGALNACT1-211ENST00000522854 MMP9P14780 707 aa12.21□□□□□ -0.46
CSGALNACT1-211ENST00000522854 PRTN3P24158 256 aa12.21□□□□□ -0.46
CSGALNACT1-211ENST00000522854 THBS3P49746 956 aa12.21□□□□□ -0.46
CSGALNACT1-211ENST00000522854 CYCSP99999 105 aaKnown RBP12.21□□□□□ -0.46
CSGALNACT1-211ENST00000522854 Q5PR19 223 aa12.21□□□□□ -0.46
CSGALNACT1-211ENST00000522854 ZNF546Q86UE3 836 aa12.21□□□□□ -0.46
CSGALNACT1-211ENST00000522854 C8orf31Q8N9H6 132 aa12.21□□□□□ -0.46
CSGALNACT1-211ENST00000522854 FAM216AQ8WUB2 273 aa12.21□□□□□ -0.46
CSGALNACT1-211ENST00000522854 R3HDM4Q96D70 268 aa12.21□□□□□ -0.46
CSGALNACT1-211ENST00000522854 TBX15Q96SF7 602 aa12.21□□□□□ -0.46
CSGALNACT1-211ENST00000522854 PRELID3BQ9Y3B1 194 aa12.21□□□□□ -0.46
CSGALNACT1-211ENST00000522854 TNCP24821 2201 aa12.2□□□□□ -0.46
CSGALNACT1-211ENST00000522854 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.2□□□□□ -0.46
CSGALNACT1-211ENST00000522854 TRAV3A0A0B4J244 114 aa12.2□□□□□ -0.46
CSGALNACT1-211ENST00000522854 SRRM4A7MD48 611 aaKnown RBP12.2□□□□□ -0.46
CSGALNACT1-211ENST00000522854 K7EPK0 472 aa12.2□□□□□ -0.46
CSGALNACT1-211ENST00000522854 FOXH1O75593 365 aa12.2□□□□□ -0.46
CSGALNACT1-211ENST00000522854 TOX4O94842 621 aa12.2□□□□□ -0.46
CSGALNACT1-211ENST00000522854 HOXB4P17483 251 aaPredicted RBP12.2□□□□□ -0.46
CSGALNACT1-211ENST00000522854 DVL1P1P54792 670 aaPredicted RBP12.2□□□□□ -0.46
CSGALNACT1-211ENST00000522854 POLR2GP62487 172 aaKnown RBP eCLIP12.2□□□□□ -0.46
CSGALNACT1-211ENST00000522854 TGIF2LXQ8IUE1 241 aa12.2□□□□□ -0.46
CSGALNACT1-211ENST00000522854 FAM71E2Q8N5Q1 922 aa12.2□□□□□ -0.46
CSGALNACT1-211ENST00000522854 DCUN1D4Q92564 292 aa12.2□□□□□ -0.46
CSGALNACT1-211ENST00000522854 TMEM186Q96B77 213 aa12.2□□□□□ -0.46
CSGALNACT1-211ENST00000522854 RITA1Q96K30 269 aa12.2□□□□□ -0.46
CSGALNACT1-211ENST00000522854 NABP2Q9BQ15 211 aa12.2□□□□□ -0.46
CSGALNACT1-211ENST00000522854 HILPDAQ9Y5L2 63 aa12.2□□□□□ -0.46
CSGALNACT1-211ENST00000522854 TEX15Q9BXT5 2789 aa12.2□□□□□ -0.46
CSGALNACT1-211ENST00000522854 CR1P17927 2039 aa12.2□□□□□ -0.46
CSGALNACT1-211ENST00000522854 IGHV3OR16-10A0A075B7F0 116 aa12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 MSGN1A6NI15 193 aa12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 RNF223E7ERA6 249 aa12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 H0YJW9 148 aa12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 H7C2Y5 167 aa12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 RGS13O14921 159 aa12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 OR9G9P0C7N8 305 aa12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 USF1P22415 310 aaPredicted RBP12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 PRRX1P54821 245 aa12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 CLEC9AQ6UXN8 241 aa12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 DMBX1Q8NFW5 382 aa12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 OR13D1Q8NGV5 346 aa12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 THAP6Q8TBB0 222 aa12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 ASB13Q8WXK3 278 aa12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 LHX4Q969G2 390 aa12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 SLC35D1Q9NTN3 355 aa12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 RCL1Q9Y2P8 373 aaKnown RBP12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 PLXNB1O43157 2135 aa12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 A0A096LNT2 108 aa12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 DUXBA0A1W2PPF3 345 aa12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 HPRT1P00492 218 aa12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 P0C879 139 aa12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 OR2B8PP59922 312 aa12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 FGL1Q08830 312 aa12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 SPINK9Q5DT21 86 aa12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 THOC7Q6I9Y2 204 aaKnown RBP12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 KRTAP1-3Q8IUG1 177 aa12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 BEND2Q8NDZ0 799 aa12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 LSM10Q969L4 123 aaKnown RBP12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 MMP24Q9Y5R2 645 aa12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 KPTNQ9Y664 436 aa12.19□□□□□ -0.46
CSGALNACT1-211ENST00000522854 RNF222A6NCQ9 220 aa12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 SSSCA1O60232 199 aa12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 PITX3O75364 302 aa12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 CD24P25063 80 aa12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 ZNF137PP52743 207 aa12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 SMCO1Q147U7 214 aa12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 FBLN7Q53RD9 439 aa12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 PRSS54Q6PEW0 395 aa12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 H2BFWTQ7Z2G1 175 aa12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 DYNAPQ8N1N2 210 aa12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 OR11H6Q8NGC7 330 aa12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 OR4S2Q8NH73 311 aa12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 MFFQ9GZY8 342 aa12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 PLEKHA2Q9HB19 425 aa12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 BEX4Q9NWD9 120 aaPredicted RBP12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 TNFSF18Q9UNG2 199 aa12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 INSIG2Q9Y5U4 225 aa12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 LY6LH3BQJ8 138 aa12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 DEDDO75618 318 aa12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 SLC25A4P12235 298 aa12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 MYOD1P15172 320 aa12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 NKX2-1P43699 371 aaPredicted RBP12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 DSCR9P59020 149 aa12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 IFITM2Q01629 132 aa12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 MIDNQ504T8 468 aa12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 KIR3DL3Q8N743 410 aa12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 OR5AN1Q8NGI8 311 aa12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 CD300LFQ8TDQ1 290 aa12.18□□□□□ -0.46
CSGALNACT1-211ENST00000522854 IGHV1-3A0A0C4DH29 117 aa12.17□□□□□ -0.46
CSGALNACT1-211ENST00000522854 A0A1B0GU03 582 aa12.17□□□□□ -0.46
CSGALNACT1-211ENST00000522854 ODF3BA8MYP8 253 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms