RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 CDK10Q15131 360 aa13.94□□□□□ -0.18
CLK4-211ENST00000522556 SAMD5Q5TGI4 173 aa13.94□□□□□ -0.18
CLK4-211ENST00000522556 IDO2Q6ZQW0 420 aa13.94□□□□□ -0.18
CLK4-211ENST00000522556 KCTD9Q7L273 389 aa13.94□□□□□ -0.18
CLK4-211ENST00000522556 COMMD1Q8N668 190 aa13.94□□□□□ -0.18
CLK4-211ENST00000522556 RNF152Q8N8N0 203 aa13.94□□□□□ -0.18
CLK4-211ENST00000522556 GPX8Q8TED1 209 aa13.94□□□□□ -0.18
CLK4-211ENST00000522556 ABHD5Q8WTS1 349 aa13.94□□□□□ -0.18
CLK4-211ENST00000522556 ACOT12Q8WYK0 555 aa13.94□□□□□ -0.18
CLK4-211ENST00000522556 RNF5Q99942 180 aa13.94□□□□□ -0.18
CLK4-211ENST00000522556 EHFQ9NZC4 300 aa13.94□□□□□ -0.18
CLK4-211ENST00000522556 A0A1W2PN81 502 aa13.93□□□□□ -0.18
CLK4-211ENST00000522556 FAM25AB3EWG3 89 aa13.93□□□□□ -0.18
CLK4-211ENST00000522556 FAM25CB3EWG5 89 aa13.93□□□□□ -0.18
CLK4-211ENST00000522556 FAM25GB3EWG6 89 aa13.93□□□□□ -0.18
CLK4-211ENST00000522556 SHOXO15266 292 aa13.93□□□□□ -0.18
CLK4-211ENST00000522556 FCGR3BO75015 233 aa13.93□□□□□ -0.18
CLK4-211ENST00000522556 PF4P02776 101 aa13.93□□□□□ -0.18
CLK4-211ENST00000522556 NAT1P18440 290 aa13.93□□□□□ -0.18
CLK4-211ENST00000522556 PRSS3P35030 304 aa13.93□□□□□ -0.18
CLK4-211ENST00000522556 CHRNA7P36544 502 aa13.93□□□□□ -0.18
CLK4-211ENST00000522556 KIAA0141Q14154 515 aaPredicted RBP13.93□□□□□ -0.18
CLK4-211ENST00000522556 RTL8BQ17RB0 113 aa13.93□□□□□ -0.18
CLK4-211ENST00000522556 CXorf66Q5JRM2 361 aaPredicted RBP13.93□□□□□ -0.18
CLK4-211ENST00000522556 ZNF660Q6AZW8 331 aaPredicted RBP13.93□□□□□ -0.18
CLK4-211ENST00000522556 TMEM17Q86X19 198 aa13.93□□□□□ -0.18
CLK4-211ENST00000522556 LYSMD2Q8IV50 215 aa13.93□□□□□ -0.18
CLK4-211ENST00000522556 MYOZ3Q8TDC0 251 aa13.93□□□□□ -0.18
CLK4-211ENST00000522556 GNB4Q9HAV0 340 aa13.93□□□□□ -0.18
CLK4-211ENST00000522556 NOTCH3Q9UM47 2321 aa13.92□□□□□ -0.18
CLK4-211ENST00000522556 CTDSP2O14595 271 aa13.92□□□□□ -0.18
CLK4-211ENST00000522556 IGLV1-40P01703 118 aa13.92□□□□□ -0.18
CLK4-211ENST00000522556 PRB2P02812 416 aaPredicted RBP13.92□□□□□ -0.18
CLK4-211ENST00000522556 ELANEP08246 267 aa13.92□□□□□ -0.18
CLK4-211ENST00000522556 IGLL1P15814 213 aa13.92□□□□□ -0.18
CLK4-211ENST00000522556 HLA-DMAP28067 261 aa13.92□□□□□ -0.18
CLK4-211ENST00000522556 RPL5P46777 297 aaKnown RBP13.92□□□□□ -0.18
CLK4-211ENST00000522556 CRIP2P52943 208 aaPredicted RBP13.92□□□□□ -0.18
CLK4-211ENST00000522556 GNB1P62873 340 aa13.92□□□□□ -0.18
CLK4-211ENST00000522556 TAGLNQ01995 201 aaKnown RBP13.92□□□□□ -0.18
CLK4-211ENST00000522556 BEAN1Q3B7T3 259 aa13.92□□□□□ -0.18
CLK4-211ENST00000522556 OVCH2Q7RTZ1 564 aa13.92□□□□□ -0.18
CLK4-211ENST00000522556 ZNF695Q8IW36 515 aa13.92□□□□□ -0.18
CLK4-211ENST00000522556 LAX1Q8IWV1 398 aa13.92□□□□□ -0.18
CLK4-211ENST00000522556 VKORC1L1Q8N0U8 176 aa13.92□□□□□ -0.18
CLK4-211ENST00000522556 LINC00482Q8N8I6 264 aa13.92□□□□□ -0.18
CLK4-211ENST00000522556 MINDY2Q8NBR6 621 aa13.92□□□□□ -0.18
CLK4-211ENST00000522556 GRPEL2Q8TAA5 225 aa13.92□□□□□ -0.18
CLK4-211ENST00000522556 TCTEX1D2Q8WW35 142 aa13.92□□□□□ -0.18
CLK4-211ENST00000522556 RAX2Q96IS3 184 aa13.92□□□□□ -0.18
CLK4-211ENST00000522556 ADTRPQ96IZ2 230 aa13.92□□□□□ -0.18
CLK4-211ENST00000522556 CMTM3Q96MX0 182 aa13.92□□□□□ -0.18
CLK4-211ENST00000522556 SLC5A7Q9GZV3 580 aa13.92□□□□□ -0.18
CLK4-211ENST00000522556 FXYD6Q9H0Q3 95 aa13.92□□□□□ -0.18
CLK4-211ENST00000522556 NUBP2Q9Y5Y2 271 aa13.92□□□□□ -0.18
CLK4-211ENST00000522556 TNCP24821 2201 aa13.91□□□□□ -0.18
CLK4-211ENST00000522556 SAA1P0DJI8 122 aaPredicted RBP13.91□□□□□ -0.18
CLK4-211ENST00000522556 FXYD3Q14802 87 aa13.91□□□□□ -0.18
CLK4-211ENST00000522556 ZNF818PQ6ZRF7 136 aa13.91□□□□□ -0.18
CLK4-211ENST00000522556 PPP1R27Q86WC6 154 aa13.91□□□□□ -0.18
CLK4-211ENST00000522556 MRPL41Q8IXM3 137 aaKnown RBP13.91□□□□□ -0.18
CLK4-211ENST00000522556 LFNGQ8NES3 379 aa13.91□□□□□ -0.18
CLK4-211ENST00000522556 DYNC2LI1Q8TCX1 351 aa13.91□□□□□ -0.18
CLK4-211ENST00000522556 RAB2BQ8WUD1 216 aa13.91□□□□□ -0.18
CLK4-211ENST00000522556 ARPC1AQ92747 370 aa13.91□□□□□ -0.18
CLK4-211ENST00000522556 OR5B12Q96R08 314 aa13.91□□□□□ -0.18
CLK4-211ENST00000522556 GON7Q9BXV9 100 aa13.91□□□□□ -0.18
CLK4-211ENST00000522556 ZFP57Q9NU63 452 aa13.91□□□□□ -0.18
CLK4-211ENST00000522556 EXTL2Q9UBQ6 330 aa13.91□□□□□ -0.18
CLK4-211ENST00000522556 H3BMQ9 156 aa13.9□□□□□ -0.18
CLK4-211ENST00000522556 RAMP3O60896 148 aa13.9□□□□□ -0.18
CLK4-211ENST00000522556 APELAP0DMC3 54 aa13.9□□□□□ -0.18
CLK4-211ENST00000522556 CD33P20138 364 aa13.9□□□□□ -0.18
CLK4-211ENST00000522556 HRH1P35367 487 aa13.9□□□□□ -0.18
CLK4-211ENST00000522556 C10orf55Q5SWW7 151 aa13.9□□□□□ -0.18
CLK4-211ENST00000522556 ASPHD1Q5U4P2 390 aa13.9□□□□□ -0.18
CLK4-211ENST00000522556 MZT2AQ6P582 158 aa13.9□□□□□ -0.18
CLK4-211ENST00000522556 UNQ5815/PRO19632Q6UWF5 114 aa13.9□□□□□ -0.18
CLK4-211ENST00000522556 ZNF562Q6V9R5 426 aa13.9□□□□□ -0.18
CLK4-211ENST00000522556 MFSD4AQ8N468 514 aa13.9□□□□□ -0.18
CLK4-211ENST00000522556 OR5H2Q8NGV7 314 aa13.9□□□□□ -0.18
CLK4-211ENST00000522556 GIMAP1Q8WWP7 306 aa13.9□□□□□ -0.18
CLK4-211ENST00000522556 AP3S1Q92572 193 aa13.9□□□□□ -0.18
CLK4-211ENST00000522556 ISOC1Q96CN7 298 aa13.9□□□□□ -0.18
CLK4-211ENST00000522556 P2RX4Q99571 388 aa13.9□□□□□ -0.18
CLK4-211ENST00000522556 SMIM31A0A1B0GVY4 71 aa13.89□□□□□ -0.19
CLK4-211ENST00000522556 RRASP10301 218 aa13.89□□□□□ -0.19
CLK4-211ENST00000522556 LGALS7P47929 136 aa13.89□□□□□ -0.19
CLK4-211ENST00000522556 TMBIM6P55061 237 aa13.89□□□□□ -0.19
CLK4-211ENST00000522556 UBE2KP61086 200 aa13.89□□□□□ -0.19
CLK4-211ENST00000522556 DEFA5Q01523 94 aa13.89□□□□□ -0.19
CLK4-211ENST00000522556 DYRK1AQ13627 763 aa13.89□□□□□ -0.19
CLK4-211ENST00000522556 WFDC9Q8NEX5 89 aa13.89□□□□□ -0.19
CLK4-211ENST00000522556 OR52I2Q8NH67 350 aa13.89□□□□□ -0.19
CLK4-211ENST00000522556 ABHD1Q96SE0 405 aa13.89□□□□□ -0.19
CLK4-211ENST00000522556 ZNF2Q9BSG1 426 aaPredicted RBP13.89□□□□□ -0.19
CLK4-211ENST00000522556 ALX4Q9H161 411 aaPredicted RBP13.89□□□□□ -0.19
CLK4-211ENST00000522556 FOXA2Q9Y261 457 aaPredicted RBP13.89□□□□□ -0.19
CLK4-211ENST00000522556 CEPT1Q9Y6K0 416 aa13.89□□□□□ -0.19
CLK4-211ENST00000522556 SULT1C2O00338 296 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms