RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 ANXA3P12429 323 aa10.77□□□□□ -0.69
CLK4-210ENST00000522136 RPA2P15927 270 aa10.77□□□□□ -0.69
CLK4-210ENST00000522136 OR8H3Q8N146 312 aa10.77□□□□□ -0.69
CLK4-210ENST00000522136 C12orf45Q8N5I9 185 aaPredicted RBP10.77□□□□□ -0.69
CLK4-210ENST00000522136 MITD1Q8WV92 249 aa10.77□□□□□ -0.69
CLK4-210ENST00000522136 RITA1Q96K30 269 aa10.77□□□□□ -0.69
CLK4-210ENST00000522136 FAM96BQ9Y3D0 163 aa10.77□□□□□ -0.69
CLK4-210ENST00000522136 OOSP1A8MZH6 123 aa10.76□□□□□ -0.69
CLK4-210ENST00000522136 TXNL1O43396 289 aa10.76□□□□□ -0.69
CLK4-210ENST00000522136 CDS2O95674 445 aa10.76□□□□□ -0.69
CLK4-210ENST00000522136 APOA2P02652 100 aa10.76□□□□□ -0.69
CLK4-210ENST00000522136 C2orf68Q2NKX9 166 aa10.76□□□□□ -0.69
CLK4-210ENST00000522136 TMEM268Q5VZI3 342 aa10.76□□□□□ -0.69
CLK4-210ENST00000522136 CCDC144NLQ6NUI1 221 aa10.76□□□□□ -0.69
CLK4-210ENST00000522136 C11orf88Q6PI97 169 aa10.76□□□□□ -0.69
CLK4-210ENST00000522136 CLEC9AQ6UXN8 241 aa10.76□□□□□ -0.69
CLK4-210ENST00000522136 SELENOHQ8IZQ5 122 aaKnown RBP10.76□□□□□ -0.69
CLK4-210ENST00000522136 WASHC3Q9Y3C0 194 aa10.76□□□□□ -0.69
CLK4-210ENST00000522136 SSNA1O43805 119 aa10.76□□□□□ -0.69
CLK4-210ENST00000522136 VENTXO95231 258 aa10.76□□□□□ -0.69
CLK4-210ENST00000522136 FOSL1P15407 271 aa10.76□□□□□ -0.69
CLK4-210ENST00000522136 RTL8BQ17RB0 113 aa10.76□□□□□ -0.69
CLK4-210ENST00000522136 DEFB112Q30KQ8 113 aa10.76□□□□□ -0.69
CLK4-210ENST00000522136 LYZL2Q7Z4W2 148 aa10.76□□□□□ -0.69
CLK4-210ENST00000522136 ZNF695Q8IW36 515 aa10.76□□□□□ -0.69
CLK4-210ENST00000522136 VKORC1L1Q8N0U8 176 aa10.76□□□□□ -0.69
CLK4-210ENST00000522136 CADM3Q8N126 398 aa10.76□□□□□ -0.69
CLK4-210ENST00000522136 PHB2Q99623 299 aa10.76□□□□□ -0.69
CLK4-210ENST00000522136 NAV3Q8IVL0 2385 aa10.75□□□□□ -0.69
CLK4-210ENST00000522136 ADAP1O75689 374 aa10.75□□□□□ -0.69
CLK4-210ENST00000522136 SNRNP70P08621 437 aaKnown RBP10.75□□□□□ -0.69
CLK4-210ENST00000522136 MC5RP33032 325 aa10.75□□□□□ -0.69
CLK4-210ENST00000522136 SRP14P37108 136 aaKnown RBP10.75□□□□□ -0.69
CLK4-210ENST00000522136 KIR2DS2P43631 304 aa10.75□□□□□ -0.69
CLK4-210ENST00000522136 HABP2Q14520 560 aaPredicted RBP10.75□□□□□ -0.69
CLK4-210ENST00000522136 HNF4GQ14541 408 aa10.75□□□□□ -0.69
CLK4-210ENST00000522136 LGI3Q8N145 548 aa10.75□□□□□ -0.69
CLK4-210ENST00000522136 SLC35G3Q8N808 338 aa10.75□□□□□ -0.69
CLK4-210ENST00000522136 OR4S2Q8NH73 311 aa10.75□□□□□ -0.69
CLK4-210ENST00000522136 COQ8AQ8NI60 647 aa10.75□□□□□ -0.69
CLK4-210ENST00000522136 CD300LFQ8TDQ1 290 aa10.75□□□□□ -0.69
CLK4-210ENST00000522136 TMEM56Q96MV1 263 aa10.75□□□□□ -0.69
CLK4-210ENST00000522136 MEGF9Q9H1U4 602 aa10.75□□□□□ -0.69
CLK4-210ENST00000522136 TMEM56-RWDD3S4R434 201 aa10.75□□□□□ -0.69
CLK4-210ENST00000522136 SRRM4A7MD48 611 aaKnown RBP10.74□□□□□ -0.69
CLK4-210ENST00000522136 CCSO14618 274 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 RBFOX2O43251 390 aaKnown RBP eCLIP10.74□□□□□ -0.69
CLK4-210ENST00000522136 B3GALNT1O75752 331 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 KRASP01116 189 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 IGKV1D-33P01593 117 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 IGKV1-33P01594 117 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 HOXB5P09067 269 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 FBP1P09467 338 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 CD1BP29016 333 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 G6PCP35575 357 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 BPIFB3P59826 476 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 RPS16P62249 146 aaKnown RBP10.74□□□□□ -0.69
CLK4-210ENST00000522136 IZUMO4Q1ZYL8 232 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 SSX9Q7RTT3 188 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 PDPNQ86YL7 162 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 TCTEX1D1Q8N7M0 179 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 RBPMSQ93062 196 aaKnown RBP10.74□□□□□ -0.69
CLK4-210ENST00000522136 FLYWCH2Q96CP2 140 aaKnown RBP10.74□□□□□ -0.69
CLK4-210ENST00000522136 F8P00451 2351 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 HIVEP2P31629 2446 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 A0A0G2JRQ6 117 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 HPRT1P00492 218 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 IGKV1-5P01602 117 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 RRASP10301 218 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 CNTFRP26992 372 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 TAGLNQ01995 201 aaKnown RBP10.74□□□□□ -0.69
CLK4-210ENST00000522136 HES1Q14469 280 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 FCN2Q15485 313 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 LRTM2Q8N967 370 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 PIFOQ8TCI5 191 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 ZNF48Q96MX3 618 aaPredicted RBP10.74□□□□□ -0.69
CLK4-210ENST00000522136 SSX3Q99909 188 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 MED28Q9H204 178 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 PLEKHA2Q9HB19 425 aa10.74□□□□□ -0.69
CLK4-210ENST00000522136 FAM212BQ9NTI7 297 aaPredicted RBP10.74□□□□□ -0.69
CLK4-210ENST00000522136 A0A0B4J2A0 478 aa10.73□□□□□ -0.69
CLK4-210ENST00000522136 DBX1A6NMT0 343 aa10.73□□□□□ -0.69
CLK4-210ENST00000522136 FAM90A9PA6NNJ1 464 aa10.73□□□□□ -0.69
CLK4-210ENST00000522136 MPTX1A8MV57 137 aa10.73□□□□□ -0.69
CLK4-210ENST00000522136 SHOXO15266 292 aa10.73□□□□□ -0.69
CLK4-210ENST00000522136 SIX6O95475 246 aa10.73□□□□□ -0.69
CLK4-210ENST00000522136 TMEM177Q53S58 311 aa10.73□□□□□ -0.69
CLK4-210ENST00000522136 DHRS7BQ6IAN0 325 aaPredicted RBP10.73□□□□□ -0.69
CLK4-210ENST00000522136 C9orf139Q6ZV77 190 aa10.73□□□□□ -0.69
CLK4-210ENST00000522136 OR4C13Q8NGP0 309 aa10.73□□□□□ -0.69
CLK4-210ENST00000522136 R3HDM4Q96D70 268 aa10.73□□□□□ -0.69
CLK4-210ENST00000522136 SEC22AQ96IW7 307 aa10.73□□□□□ -0.69
CLK4-210ENST00000522136 EAF1Q96JC9 268 aaPredicted RBP10.73□□□□□ -0.69
CLK4-210ENST00000522136 HARBI1Q96MB7 349 aa10.73□□□□□ -0.69
CLK4-210ENST00000522136 SHPKQ9UHJ6 478 aa10.73□□□□□ -0.69
CLK4-210ENST00000522136 GOSR2O14653 212 aa10.72□□□□□ -0.69
CLK4-210ENST00000522136 CXCL3P19876 107 aa10.72□□□□□ -0.69
CLK4-210ENST00000522136 BRS3P32247 399 aa10.72□□□□□ -0.69
CLK4-210ENST00000522136 RRAS2P62070 204 aaPredicted RBP10.72□□□□□ -0.69
CLK4-210ENST00000522136 SRPXP78539 464 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms