RNA–Protein interactions for RNA: ENST00000521600.5

PVT1-211, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 408 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-211ENST00000521600 NKX6-2Q9C056 277 aaPredicted RBP3.3□□□□□ -1.88
PVT1-211ENST00000521600 OR2J1Q9GZK6 312 aa3.3□□□□□ -1.88
PVT1-211ENST00000521600 FGF23Q9GZV9 251 aaPredicted RBP3.3□□□□□ -1.88
PVT1-211ENST00000521600 ARV1Q9H2C2 271 aa3.3□□□□□ -1.88
PVT1-211ENST00000521600 OR51B6Q9H340 312 aa3.3□□□□□ -1.88
PVT1-211ENST00000521600 RAB9BQ9NP90 201 aa3.3□□□□□ -1.88
PVT1-211ENST00000521600 OR2S2Q9NQN1 319 aa3.3□□□□□ -1.88
PVT1-211ENST00000521600 PLSCR4Q9NRQ2 329 aa3.3□□□□□ -1.88
PVT1-211ENST00000521600 LIN7CQ9NUP9 197 aaKnown RBP3.3□□□□□ -1.88
PVT1-211ENST00000521600 ZNF629Q9UEG4 869 aaPredicted RBP3.3□□□□□ -1.88
PVT1-211ENST00000521600 FBXL17Q9UF56 701 aa3.3□□□□□ -1.88
PVT1-211ENST00000521600 PURGQ9UJV8 347 aaKnown RBP3.3□□□□□ -1.88
PVT1-211ENST00000521600 TRAPPC2LQ9UL33 140 aa3.3□□□□□ -1.88
PVT1-211ENST00000521600 RCL1Q9Y2P8 373 aaKnown RBP3.3□□□□□ -1.88
PVT1-211ENST00000521600 CARHSP1Q9Y2V2 147 aaKnown RBP3.3□□□□□ -1.88
PVT1-211ENST00000521600 WIPI2Q9Y4P8 454 aa3.3□□□□□ -1.88
PVT1-211ENST00000521600 BTBD17A6NE02 478 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 OOEPA6NGQ2 149 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 OR5H1A6NKK0 313 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 UMAD1C9J7I0 102 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 FAM90A26D6RGX4 464 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 F8W036 122 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.29□□□□□ -1.88
PVT1-211ENST00000521600 IFNL4K9M1U5 179 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 SIRPB1O00241 398 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 CDIPTO14735 213 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 HSD17B6O14756 317 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 ADAM20O43506 726 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 SPRY2O43597 315 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 CD5LO43866 347 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 PGLYRP1O75594 196 aaPredicted RBP3.29□□□□□ -1.88
PVT1-211ENST00000521600 RHBDL1O75783 438 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 SCO1O75880 301 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 DFFBO76075 338 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 GOSR1O95249 250 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 OR2H2O95918 312 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 HAND1O96004 215 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 IGLV1-44P01699 117 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 DANCRP0C864 163 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 SPP1P10451 314 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 LMO1P25800 156 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 CAMLGP49069 296 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 DVL1P1P54792 670 aaPredicted RBP3.29□□□□□ -1.88
PVT1-211ENST00000521600 ERVK11-1P61568 191 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 RPL23AP62750 156 aaKnown RBP3.29□□□□□ -1.88
PVT1-211ENST00000521600 PSG7Q13046 419 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 ZNF154Q13106 437 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 CATR1Q13166 79 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 BTN1A1Q13410 526 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 HERPUD1Q15011 391 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 PEA15Q15121 130 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 NMSQ5H8A3 153 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 C10orf91Q5T1B1 145 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 PXDC1Q5TGL8 231 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 SLC35E4Q6ICL7 350 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 CCDC144NLQ6NUI1 221 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 DPPA3Q6W0C5 159 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 Q6ZPA2 131 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 SSX8Q7RTT4 187 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 STX12Q86Y82 276 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 FAM219AQ8IW50 185 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 BATF2Q8N1L9 274 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.29□□□□□ -1.88
PVT1-211ENST00000521600 WDR31Q8NA23 367 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 C9orf106Q8NAJ2 232 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 OR52M1Q8NGK5 317 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 LHFPL5Q8TAF8 219 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 IL1F10Q8WWZ1 152 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 RDH5Q92781 318 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 GALMQ96C23 342 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 GNPNAT1Q96EK6 184 aaPredicted RBP3.29□□□□□ -1.88
PVT1-211ENST00000521600 CYYR1Q96J86 154 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 ZNF488Q96MN9 340 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 RAB40CQ96S21 281 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 TSNAXQ99598 290 aaKnown RBP3.29□□□□□ -1.88
PVT1-211ENST00000521600 PBDC1Q9BVG4 233 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 C1QTNF6Q9BXI9 259 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 KRTAP4-8Q9BYQ9 185 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 TLNRD1Q9H1K6 362 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 HRH4Q9H3N8 390 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 SMDT1Q9H4I9 107 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 UBTD1Q9HAC8 227 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 SEBOXQ9HB31 216 aaPredicted RBP3.29□□□□□ -1.88
PVT1-211ENST00000521600 HES4Q9HCC6 221 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 TREM1Q9NP99 234 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 YAE1D1Q9NRH1 226 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 CCL28Q9NRJ3 127 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 LYRM2Q9NU23 88 aaPredicted RBP3.29□□□□□ -1.88
PVT1-211ENST00000521600 UQCC1Q9NVA1 299 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 IL36RNQ9UBH0 155 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 LAMP3Q9UQV4 416 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 RBM7Q9Y580 266 aaKnown RBP3.29□□□□□ -1.88
PVT1-211ENST00000521600 KPTNQ9Y664 436 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 CADP27708 2225 aa3.29□□□□□ -1.88
PVT1-211ENST00000521600 SACSQ9NZJ4 4579 aa3.28□□□□□ -1.88
PVT1-211ENST00000521600 IGHV2OR16-5A0A0B4J2B6 119 aa3.28□□□□□ -1.88
PVT1-211ENST00000521600 IGKV1D-13A0A0B4J2D9 117 aa3.28□□□□□ -1.88
PVT1-211ENST00000521600 IGKV1-6A0A0C4DH72 117 aa3.28□□□□□ -1.88
PVT1-211ENST00000521600 A0A1B0GWJ7 208 aa3.28□□□□□ -1.88
PVT1-211ENST00000521600 A0A1W2PR80 420 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms