RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 PUS1Q9Y606 427 aaKnown RBP eCLIP1.87□□□□□ -2.11
HMGN1P28-201ENST00000521340 CEP192Q8TEP8 1941 aa1.87□□□□□ -2.11
HMGN1P28-201ENST00000521340 ATG2BQ96BY7 2078 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 A0A1B0GTI1 187 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 C7orf66A4D0T2 115 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 PGPA6NDG6 321 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 ARL5CA6NH57 179 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 CEACAM18A8MTB9 384 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 CLDN25C9JDP6 229 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 TMEM250H0YL14 139 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 SLC22A1O15245 554 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 TCAPO15273 167 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 UGT2B11O75310 529 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 NIPSNAP2O75323 286 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 IGKV3-11P04433 115 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 CDK1P06493 297 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 LINC00032P0C843 101 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 OCM2P0CE71 109 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 OCMP0CE72 109 aaPredicted RBP1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 LIMS3P0CW19 117 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 LIMS4P0CW20 117 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 RD3LP0DJH9 198 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 RPS3P23396 243 aaKnown RBP eCLIP1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 IMPA1P29218 277 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 CD40LGP29965 261 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 HTR2BP41595 481 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 GZMMP51124 257 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 POLR2JP52435 117 aaKnown RBP1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 MAXP61244 160 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 SLC35A2P78381 396 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 GNA12Q03113 381 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 ATP5G2Q06055 141 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 FUT5Q11128 374 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 ZNF235Q14590 738 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 ZNF846Q147U1 533 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 ELOCQ15369 112 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 RGS21Q2M5E4 152 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 TMEM249Q2WGJ8 235 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 FAM162BQ5T6X4 162 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 TMEM215Q68D42 235 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 LAMTOR1Q6IAA8 161 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 SBSNQ6UWP8 590 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 PLEKHG7Q6ZR37 379 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 HMGN2P46Q86SG4 172 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 CALHM3Q86XJ0 350 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 PDPNQ86YL7 162 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 C8orf59Q8N0T1 100 aaPredicted RBP1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 OR13C4Q8NGS5 318 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 OR9A2Q8NGT5 310 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 DYNC2LI1Q8TCX1 351 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 PPWD1Q96BP3 646 aaKnown RBP1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 TAMM41Q96BW9 452 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 FXYD5Q96DB9 178 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 YIPF6Q96EC8 236 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 ZNF514Q96K75 400 aaPredicted RBP1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 OR2M4Q96R27 311 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 CGREF1Q99674 301 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 C1orf50Q9BV19 199 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 SCRT1Q9BWW7 348 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 LCE3DQ9BYE3 92 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 ZNF436Q9C0F3 470 aaPredicted RBP1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 DIABLOQ9NR28 239 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 IMP3Q9NV31 184 aaKnown RBP1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 GID8Q9NWU2 228 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 IL37Q9NZH6 218 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 PAIP2BQ9ULR5 123 aaKnown RBP1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 GINS2Q9Y248 185 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 FAM32AQ9Y421 112 aaKnown RBP1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 TIMM22Q9Y584 194 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 ZNF706Q9Y5V0 76 aaPredicted RBP1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 ARL5AQ9Y689 179 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 HSPE1-MOB4S4R3N1 261 aa1.86□□□□□ -2.11
HMGN1P28-201ENST00000521340 THADAQ6YHU6 1953 aa1.85□□□□□ -2.11
HMGN1P28-201ENST00000521340 MYO7AQ13402 2215 aa1.85□□□□□ -2.11
HMGN1P28-201ENST00000521340 IGKV1OR2-108A0A075B7D4 117 aa1.85□□□□□ -2.11
HMGN1P28-201ENST00000521340 A0A096LPI6 279 aa1.85□□□□□ -2.11
HMGN1P28-201ENST00000521340 IZUMO1RA6ND01 250 aa1.85□□□□□ -2.11
HMGN1P28-201ENST00000521340 METTL15A6NJ78 407 aa1.85□□□□□ -2.11
HMGN1P28-201ENST00000521340 FAM183AA6NL82 134 aa1.85□□□□□ -2.11
HMGN1P28-201ENST00000521340 CLDN24A6NM45 220 aa1.85□□□□□ -2.11
HMGN1P28-201ENST00000521340 UPK2O00526 184 aa1.85□□□□□ -2.11
HMGN1P28-201ENST00000521340 CXCR6O00574 342 aa1.85□□□□□ -2.11
HMGN1P28-201ENST00000521340 KPNA4O00629 521 aaPredicted RBP1.85□□□□□ -2.11
HMGN1P28-201ENST00000521340 TOR1AO14656 332 aa1.85□□□□□ -2.11
HMGN1P28-201ENST00000521340 RTL8CO15255 209 aa1.85□□□□□ -2.11
HMGN1P28-201ENST00000521340 MPZL2O60487 215 aa1.85□□□□□ -2.11
HMGN1P28-201ENST00000521340 MRPS14O60783 128 aaKnown RBP1.85□□□□□ -2.11
HMGN1P28-201ENST00000521340 OR2A4O95047 310 aa1.85□□□□□ -2.11
HMGN1P28-201ENST00000521340 CDRT1O95170 752 aa1.85□□□□□ -2.11
HMGN1P28-201ENST00000521340 IGHV1-46P01743 117 aa1.85□□□□□ -2.11
HMGN1P28-201ENST00000521340 PIRTP0C851 137 aa1.85□□□□□ -2.11
HMGN1P28-201ENST00000521340 CYBAP13498 195 aa1.85□□□□□ -2.11
HMGN1P28-201ENST00000521340 MPIP34949 423 aa1.85□□□□□ -2.11
HMGN1P28-201ENST00000521340 ETV6P41212 452 aa1.85□□□□□ -2.11
HMGN1P28-201ENST00000521340 CXCR4P61073 352 aa1.85□□□□□ -2.11
HMGN1P28-201ENST00000521340 NCS1P62166 190 aa1.85□□□□□ -2.11
HMGN1P28-201ENST00000521340 RPL38P63173 70 aaKnown RBP1.85□□□□□ -2.11
HMGN1P28-201ENST00000521340 PRDX1Q06830 199 aaKnown RBP1.85□□□□□ -2.11
HMGN1P28-201ENST00000521340 FADDQ13158 208 aa1.85□□□□□ -2.11
HMGN1P28-201ENST00000521340 TAF1AQ15573 450 aaPredicted RBP1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms