RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 THUMPD1Q9NXG2 353 aaKnown RBP2.79□□□□□ -1.96
VPS13B-208ENST00000521037 SLC25A37Q9NYZ2 338 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 SIGLEC8Q9NYZ4 499 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 KLK11Q9UBX7 282 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 BTNL2Q9UIR0 455 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 HILPDAQ9Y5L2 63 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 N6AMT1Q9Y5N5 214 aa2.79□□□□□ -1.96
VPS13B-208ENST00000521037 CD300LBA8K4G0 201 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 C16orf90A8MZG2 172 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 PRAC2D3DTV9 90 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 TNFRSF11BO00300 401 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 OVOL1O14753 267 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 RER1O15258 196 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 ZNF682O95780 498 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 IGLV1-47P01700 117 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 ACSM4P0C7M7 580 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 CTLA4P16410 223 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 GADD45AP24522 165 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 FMO3P31513 532 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 FCGR2CP31995 323 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 OTX1P32242 354 aaPredicted RBP2.78□□□□□ -1.96
VPS13B-208ENST00000521037 MAP2K4P45985 399 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 P2RY1P47900 373 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 RAB9AP51151 201 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 SNRPGP62308 76 aaKnown RBP2.78□□□□□ -1.96
VPS13B-208ENST00000521037 SELENOWP63302 87 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 IFITM2Q01629 132 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 RPL18Q07020 188 aaKnown RBP2.78□□□□□ -1.96
VPS13B-208ENST00000521037 ST3GAL4Q11206 333 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 EIF2B1Q14232 305 aaKnown RBP2.78□□□□□ -1.96
VPS13B-208ENST00000521037 SGCAQ16586 387 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 MICAQ29983 383 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 KLHL12Q53G59 568 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 HSD17B12Q53GQ0 312 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 FAM76BQ5HYJ3 339 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 SLC25A30Q5SVS4 291 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 ATAD3CQ5T2N8 411 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 HACD4Q5VWC8 232 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 TMEM236Q5W0B7 351 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 RNASEKQ6P5S7 137 aaKnown RBP2.78□□□□□ -1.96
VPS13B-208ENST00000521037 SMARCD3Q6STE5 483 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 AHSA2Q719I0 299 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 TSEN54Q7Z6J9 526 aaKnown RBP2.78□□□□□ -1.96
VPS13B-208ENST00000521037 TMEM179BQ7Z7N9 219 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 TRPT1Q86TN4 253 aaKnown RBP2.78□□□□□ -1.96
VPS13B-208ENST00000521037 ENTHD1Q8IYW4 607 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 RDH10Q8IZV5 341 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 FAM86B1Q8N7N1 296 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 ZNF491Q8N8L2 437 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 PROKR2Q8NFJ6 384 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 OR4D11Q8NGI4 311 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 OR1L4Q8NGR5 311 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 OR1N2Q8NGR9 330 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 LRRC29Q8WV35 223 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 NUDCD2Q8WVJ2 157 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 ARPC1AQ92747 370 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 C10orf35Q96D05 121 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 SDSLQ96GA7 329 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 PANX1Q96RD7 426 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 MGLLQ99685 303 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 PRSS27Q9BQR3 290 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 MND1Q9BWT6 205 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 DNTTIP1Q9H147 329 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 TMEM38AQ9H6F2 299 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 HEXA-AS1Q9H8Q6 139 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 PLSCR3Q9NRY6 295 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 PEF1Q9UBV8 284 aaKnown RBP2.78□□□□□ -1.96
VPS13B-208ENST00000521037 ZNF391Q9UJN7 358 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 KLK5Q9Y337 293 aaPredicted RBP2.78□□□□□ -1.96
VPS13B-208ENST00000521037 RPL36Q9Y3U8 105 aaKnown RBP2.78□□□□□ -1.96
VPS13B-208ENST00000521037 V9GYQ6 96 aa2.78□□□□□ -1.96
VPS13B-208ENST00000521037 LOC100506127A0A0U1RQW1 187 aa2.77□□□□□ -1.97
VPS13B-208ENST00000521037 MEX3AA1L020 520 aaKnown RBP2.77□□□□□ -1.97
VPS13B-208ENST00000521037 FAM74A7A6NL05 159 aa2.77□□□□□ -1.97
VPS13B-208ENST00000521037 ZNF670-ZNF695F2Z2N8 137 aa2.77□□□□□ -1.97
VPS13B-208ENST00000521037 SGCEO43556 437 aa2.77□□□□□ -1.97
VPS13B-208ENST00000521037 ORC5O43913 435 aa2.77□□□□□ -1.97
VPS13B-208ENST00000521037 PRKYO43930 277 aa2.77□□□□□ -1.97
VPS13B-208ENST00000521037 GMDSO60547 372 aa2.77□□□□□ -1.97
VPS13B-208ENST00000521037 CCNB2O95067 398 aa2.77□□□□□ -1.97
VPS13B-208ENST00000521037 HLA-DQB1P01920 261 aa2.77□□□□□ -1.97
VPS13B-208ENST00000521037 C1QBP02746 253 aa2.77□□□□□ -1.97
VPS13B-208ENST00000521037 ARG1P05089 322 aa2.77□□□□□ -1.97
VPS13B-208ENST00000521037 PSG2P11465 335 aa2.77□□□□□ -1.97
VPS13B-208ENST00000521037 PSKH1P11801 424 aa2.77□□□□□ -1.97
VPS13B-208ENST00000521037 IL7P13232 177 aa2.77□□□□□ -1.97
VPS13B-208ENST00000521037 PRKACGP22612 351 aa2.77□□□□□ -1.97
VPS13B-208ENST00000521037 MYL9P24844 172 aa2.77□□□□□ -1.97
VPS13B-208ENST00000521037 UCP1P25874 307 aa2.77□□□□□ -1.97
VPS13B-208ENST00000521037 SDC2P34741 201 aa2.77□□□□□ -1.97
VPS13B-208ENST00000521037 AP2S1P53680 142 aaPredicted RBP2.77□□□□□ -1.97
VPS13B-208ENST00000521037 LSM3P62310 102 aaKnown RBP2.77□□□□□ -1.97
VPS13B-208ENST00000521037 PPP3R1P63098 170 aa2.77□□□□□ -1.97
VPS13B-208ENST00000521037 BDH1Q02338 343 aa2.77□□□□□ -1.97
VPS13B-208ENST00000521037 ZNF92Q03936 586 aa2.77□□□□□ -1.97
VPS13B-208ENST00000521037 CD300CQ08708 224 aa2.77□□□□□ -1.97
VPS13B-208ENST00000521037 ZNF616Q08AN1 781 aa2.77□□□□□ -1.97
VPS13B-208ENST00000521037 MLLT11Q13015 90 aaPredicted RBP2.77□□□□□ -1.97
VPS13B-208ENST00000521037 MICBQ29980 383 aa2.77□□□□□ -1.97
VPS13B-208ENST00000521037 LGALS9BQ3B8N2 356 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms