RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 IGHV1-69-2A0A0G2JMI3 117 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 A6NED7 52 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 C15orf65H3BRN8 121 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 BHLHE40O14503 412 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 LECT2O14960 151 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 TTRP02766 147 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 PFN1P07737 140 aaKnown RBP2.29□□□□□ -2.04
SQLE-204ENST00000520493 CST2P09228 141 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 ZNF286BP0CG31 522 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 IGHV3-30-3P0DP02 117 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 CRABP2P29373 138 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 TAS2R45P59539 299 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 CAV1Q03135 178 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 ADM2Q7Z4H4 148 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 BAP18Q8IXM2 172 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 C1orf174Q8IYL3 243 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 OR2T27Q8NH04 317 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 LHFPL5Q8TAF8 219 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 ZNF721Q8TF20 911 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 AP3S1Q92572 193 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 BORCS7Q96B45 105 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 BTF3L4Q96K17 158 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 CCL13Q99616 98 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 RSPO3Q9BXY4 272 aaPredicted RBP2.29□□□□□ -2.04
SQLE-204ENST00000520493 TRIM4Q9C037 500 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 DCSTAMPQ9H295 470 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 OR5V1Q9UGF6 321 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 SLC23A2Q9UGH3 650 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 ANAPC10Q9UM13 185 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 CARHSP1Q9Y2V2 147 aaKnown RBP2.29□□□□□ -2.04
SQLE-204ENST00000520493 BDP1A6H8Y1 2624 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 CCDC144AA2RUR9 1427 aa2.28□□□□□ -2.04
SQLE-204ENST00000520493 A0A1B0GW54 56 aa2.28□□□□□ -2.04
SQLE-204ENST00000520493 OR6C6A6NF89 314 aa2.28□□□□□ -2.04
SQLE-204ENST00000520493 HLA-DQB2P05538 268 aa2.28□□□□□ -2.04
SQLE-204ENST00000520493 HIST1H1TP22492 207 aaPredicted RBP2.28□□□□□ -2.04
SQLE-204ENST00000520493 PPP1CCP36873 323 aaKnown RBP2.28□□□□□ -2.04
SQLE-204ENST00000520493 TNFAIP6P98066 277 aaPredicted RBP2.28□□□□□ -2.04
SQLE-204ENST00000520493 DEFA6Q01524 100 aa2.28□□□□□ -2.04
SQLE-204ENST00000520493 FABP9Q0Z7S8 132 aa2.28□□□□□ -2.04
SQLE-204ENST00000520493 MRPL51Q4U2R6 128 aaKnown RBP2.28□□□□□ -2.04
SQLE-204ENST00000520493 C20orf196Q8IYI0 205 aa2.28□□□□□ -2.04
SQLE-204ENST00000520493 ZNF664Q8N3J9 261 aa2.28□□□□□ -2.04
SQLE-204ENST00000520493 ZNF680Q8NEM1 530 aa2.28□□□□□ -2.04
SQLE-204ENST00000520493 OR10X1Q8NGY0 326 aa2.28□□□□□ -2.04
SQLE-204ENST00000520493 GNPNAT1Q96EK6 184 aaPredicted RBP2.28□□□□□ -2.04
SQLE-204ENST00000520493 PRRT1Q99946 306 aa2.28□□□□□ -2.04
SQLE-204ENST00000520493 NMNAT1Q9HAN9 279 aaPredicted RBP2.28□□□□□ -2.04
SQLE-204ENST00000520493 MRPL27Q9P0M9 148 aaKnown RBP2.28□□□□□ -2.04
SQLE-204ENST00000520493 DOK5Q9P104 306 aa2.28□□□□□ -2.04
SQLE-204ENST00000520493 TAAR3PQ9P1P4 343 aa2.28□□□□□ -2.04
SQLE-204ENST00000520493 AK3Q9UIJ7 227 aa2.28□□□□□ -2.04
SQLE-204ENST00000520493 ZNF391Q9UJN7 358 aa2.28□□□□□ -2.04
SQLE-204ENST00000520493 ZNF835Q9Y2P0 537 aa2.28□□□□□ -2.04
SQLE-204ENST00000520493 KLK5Q9Y337 293 aaPredicted RBP2.28□□□□□ -2.04
SQLE-204ENST00000520493 NAV2Q8IVL1 2488 aa2.27□□□□□ -2.05
SQLE-204ENST00000520493 ITGB4P16144 1822 aa2.27□□□□□ -2.05
SQLE-204ENST00000520493 A0A0B4J2C4 111 aa2.27□□□□□ -2.05
SQLE-204ENST00000520493 SLC25A20O43772 301 aa2.27□□□□□ -2.05
SQLE-204ENST00000520493 CNIH1O95406 144 aa2.27□□□□□ -2.05
SQLE-204ENST00000520493 IGHMP01871 453 aa2.27□□□□□ -2.05
SQLE-204ENST00000520493 RBX1P62877 108 aa2.27□□□□□ -2.05
SQLE-204ENST00000520493 FKBP1AP62942 108 aaKnown RBP2.27□□□□□ -2.05
SQLE-204ENST00000520493 IAH1Q2TAA2 248 aaPredicted RBP2.27□□□□□ -2.05
SQLE-204ENST00000520493 LIN52Q52LA3 116 aa2.27□□□□□ -2.05
SQLE-204ENST00000520493 DNLZQ5SXM8 178 aa2.27□□□□□ -2.05
SQLE-204ENST00000520493 HACD4Q5VWC8 232 aa2.27□□□□□ -2.05
SQLE-204ENST00000520493 DHRS4L2Q6PKH6 230 aa2.27□□□□□ -2.05
SQLE-204ENST00000520493 SCXQ7RTU7 201 aa2.27□□□□□ -2.05
SQLE-204ENST00000520493 ZNF676Q8N7Q3 588 aa2.27□□□□□ -2.05
SQLE-204ENST00000520493 OR4X1Q8NH49 305 aa2.27□□□□□ -2.05
SQLE-204ENST00000520493 SFRP2Q96HF1 295 aa2.27□□□□□ -2.05
SQLE-204ENST00000520493 CEP19Q96LK0 163 aa2.27□□□□□ -2.05
SQLE-204ENST00000520493 FAM96AQ9H5X1 160 aa2.27□□□□□ -2.05
SQLE-204ENST00000520493 ZNF443Q9Y2A4 671 aaPredicted RBP2.27□□□□□ -2.05
SQLE-204ENST00000520493 PRELID3BQ9Y3B1 194 aa2.27□□□□□ -2.05
SQLE-204ENST00000520493 U3KQK5 164 aa2.27□□□□□ -2.05
SQLE-204ENST00000520493 PIK3C2GO75747 1445 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 SSH2Q76I76 1423 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 SZT2Q5T011 3432 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 ZNF532Q9HCE3 1301 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 IGKV1D-37A0A075B6S9 117 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 TMEM238C9JI98 176 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 ZNF878C9JN71 531 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 INMT-MINDY4F8WBC2 141 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 SLC17A3O00476 420 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 OR7C1O76099 320 aaPredicted RBP2.26□□□□□ -2.05
SQLE-204ENST00000520493 INAFM2P0DMQ5 153 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 FGF6P10767 208 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 NPPCP23582 126 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 CRABP1P29762 137 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 GNG10P50151 68 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 ZNF140P52738 457 aaPredicted RBP2.26□□□□□ -2.05
SQLE-204ENST00000520493 DR1Q01658 176 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 DHRS2Q13268 280 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 CDK10Q15131 360 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 TAF1AQ15573 450 aaPredicted RBP2.26□□□□□ -2.05
SQLE-204ENST00000520493 LPCAT3Q6P1A2 487 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 IGFL1Q6UW32 110 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 SLC36A1Q7Z2H8 476 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms