RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 ATAD5Q96QE3 1844 aa1.02□□□□□ -2.25
SKP1-207ENST00000520417 NAA38Q9BRA0 125 aaKnown RBP1.02□□□□□ -2.25
SKP1-207ENST00000520417 LLPHQ9BRT6 129 aaKnown RBP1.02□□□□□ -2.25
SKP1-207ENST00000520417 TIPINQ9BVW5 301 aa1.02□□□□□ -2.25
SKP1-207ENST00000520417 GNB1LQ9BYB4 327 aa1.02□□□□□ -2.25
SKP1-207ENST00000520417 MRPL32Q9BYC8 188 aaKnown RBP1.02□□□□□ -2.25
SKP1-207ENST00000520417 NSRP1Q9H0G5 558 aaKnown RBP1.02□□□□□ -2.25
SKP1-207ENST00000520417 HHLA3Q9XRX5 114 aa1.02□□□□□ -2.25
SKP1-207ENST00000520417 AMMECR1Q9Y4X0 333 aaPredicted RBP1.02□□□□□ -2.25
SKP1-207ENST00000520417 ATP6V1DQ9Y5K8 247 aa1.02□□□□□ -2.25
SKP1-207ENST00000520417 FAM215AQ9Y5M1 114 aa1.02□□□□□ -2.25
SKP1-207ENST00000520417 STRCP1A6NGW2 1772 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 GRIN2BQ13224 1484 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 TMSB15BA0A087X1C1 80 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 TINCRA0A1B0GVN0 87 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 M0R381 172 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 DEXIO95424 95 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 HLA-DQB2P05538 268 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 HIST1H1CP16403 213 aaKnown RBP1.01□□□□□ -2.25
SKP1-207ENST00000520417 CXCL2P19875 107 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 CD24P25063 80 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 MIPP30301 263 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 CCR2P41597 374 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 BLVRAP53004 296 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 CTBP2P56545 445 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 FABP5Q01469 135 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 GLO1Q04760 184 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 PPP1R1AQ13522 171 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 COTL1Q14019 142 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 JOSD1Q15040 202 aaPredicted RBP1.01□□□□□ -2.25
SKP1-207ENST00000520417 DNM1P34Q6PK57 102 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 SPATA12Q7Z6I5 190 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 PACRGLQ8N7B6 248 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 OR13C8Q8NGS7 320 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 CLDND2Q8NHS1 167 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 CPNE2Q96FN4 548 aaPredicted RBP1.01□□□□□ -2.25
SKP1-207ENST00000520417 SFRP2Q96HF1 295 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 KCTD7Q96MP8 289 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 TMEM109Q9BVC6 243 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 DERL2Q9GZP9 239 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 TMEM222Q9H0R3 208 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 HDHD2Q9H0R4 259 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 PLEKHJ1Q9NW61 149 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 TP53TG1Q9Y2A0 90 aa1.01□□□□□ -2.25
SKP1-207ENST00000520417 PCYT1BQ9Y5K3 369 aaPredicted RBP1.01□□□□□ -2.25
SKP1-207ENST00000520417 DSCAML1Q8TD84 2053 aa1□□□□□ -2.25
SKP1-207ENST00000520417 ZNF532Q9HCE3 1301 aa1□□□□□ -2.25
SKP1-207ENST00000520417 TEX50A0A1B0GTY4 177 aa1□□□□□ -2.25
SKP1-207ENST00000520417 C5orf49A4QMS7 147 aa1□□□□□ -2.25
SKP1-207ENST00000520417 BHLHE40O14503 412 aa1□□□□□ -2.25
SKP1-207ENST00000520417 COCHO43405 550 aa1□□□□□ -2.25
SKP1-207ENST00000520417 KLRC4O43908 158 aa1□□□□□ -2.25
SKP1-207ENST00000520417 NAPSAO96009 420 aa1□□□□□ -2.25
SKP1-207ENST00000520417 MT-CO2P00403 227 aa1□□□□□ -2.25
SKP1-207ENST00000520417 NPYP01303 97 aa1□□□□□ -2.25
SKP1-207ENST00000520417 APOEP02649 317 aa1□□□□□ -2.25
SKP1-207ENST00000520417 TYMSP04818 313 aa1□□□□□ -2.25
SKP1-207ENST00000520417 CXCL3P19876 107 aa1□□□□□ -2.25
SKP1-207ENST00000520417 CD79BP40259 229 aa1□□□□□ -2.25
SKP1-207ENST00000520417 CDC34P49427 236 aaPredicted RBP1□□□□□ -2.25
SKP1-207ENST00000520417 SNAP25P60880 206 aa1□□□□□ -2.25
SKP1-207ENST00000520417 HOXC5Q00444 222 aa1□□□□□ -2.25
SKP1-207ENST00000520417 Q6ZRN7 208 aaPredicted RBP1□□□□□ -2.25
SKP1-207ENST00000520417 HIST2H3AQ71DI3 136 aa1□□□□□ -2.25
SKP1-207ENST00000520417 NAA40Q86UY6 237 aa1□□□□□ -2.25
SKP1-207ENST00000520417 OR51T1Q8NGJ9 327 aa1□□□□□ -2.25
SKP1-207ENST00000520417 SLC37A2Q8TED4 501 aa1□□□□□ -2.25
SKP1-207ENST00000520417 SMCR5Q8TEV8 140 aa1□□□□□ -2.25
SKP1-207ENST00000520417 NMNAT3Q96T66 252 aa1□□□□□ -2.25
SKP1-207ENST00000520417 SLC22A4Q9H015 551 aa1□□□□□ -2.25
SKP1-207ENST00000520417 MS4A6AQ9H2W1 248 aa1□□□□□ -2.25
SKP1-207ENST00000520417 MAP1LC3AQ9H492 121 aa1□□□□□ -2.25
SKP1-207ENST00000520417 C8orf4Q9NR00 106 aa1□□□□□ -2.25
SKP1-207ENST00000520417 FGFR1OP2Q9NVK5 253 aa1□□□□□ -2.25
SKP1-207ENST00000520417 NKIRAS1Q9NYS0 192 aa1□□□□□ -2.25
SKP1-207ENST00000520417 C15orf41Q9Y2V0 281 aa1□□□□□ -2.25
SKP1-207ENST00000520417 POLR3HQ9Y535 204 aaPredicted RBP1□□□□□ -2.25
SKP1-207ENST00000520417 KDM5BQ9UGL1 1544 aa0.99□□□□□ -2.25
SKP1-207ENST00000520417 RAD50Q92878 1312 aa0.99□□□□□ -2.25
SKP1-207ENST00000520417 H0Y980 276 aa0.99□□□□□ -2.25
SKP1-207ENST00000520417 BIRC5O15392 142 aa0.99□□□□□ -2.25
SKP1-207ENST00000520417 IL3P08700 152 aa0.99□□□□□ -2.25
SKP1-207ENST00000520417 KRT7P08729 469 aa0.99□□□□□ -2.25
SKP1-207ENST00000520417 IDH3GP51553 393 aaPredicted RBP0.99□□□□□ -2.25
SKP1-207ENST00000520417 RBM11P57052 281 aaKnown RBP0.99□□□□□ -2.25
SKP1-207ENST00000520417 TAS2R20P59543 309 aa0.99□□□□□ -2.25
SKP1-207ENST00000520417 TBPL1P62380 186 aa0.99□□□□□ -2.25
SKP1-207ENST00000520417 HLA-DRB3P79483 266 aa0.99□□□□□ -2.25
SKP1-207ENST00000520417 EBPQ15125 230 aaKnown RBP0.99□□□□□ -2.25
SKP1-207ENST00000520417 CST9Q5W186 159 aa0.99□□□□□ -2.25
SKP1-207ENST00000520417 ZNF705AQ6ZN79 300 aaPredicted RBP0.99□□□□□ -2.25
SKP1-207ENST00000520417 RASSF6Q6ZTQ3 369 aa0.99□□□□□ -2.25
SKP1-207ENST00000520417 SLC51BQ86UW2 128 aa0.99□□□□□ -2.25
SKP1-207ENST00000520417 COMMD7Q86VX2 200 aa0.99□□□□□ -2.25
SKP1-207ENST00000520417 SMIM19Q96E16 107 aa0.99□□□□□ -2.25
SKP1-207ENST00000520417 TMA16Q96EY4 203 aaKnown RBP0.99□□□□□ -2.25
SKP1-207ENST00000520417 HES4Q9HCC6 221 aa0.99□□□□□ -2.25
SKP1-207ENST00000520417 IMP3Q9NV31 184 aaKnown RBP0.99□□□□□ -2.25
SKP1-207ENST00000520417 BABAM2Q9NXR7 383 aa0.99□□□□□ -2.25
SKP1-207ENST00000520417 USE1Q9NZ43 259 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms