RNA–Protein interactions for RNA: ENST00000517114.1

SCARNA16.5-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.5-201ENST00000517114 RFPL4AL1F8VTS6 287 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 INMT-MINDY4F8WBC2 141 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 G3V318 75 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 H3BMM0 161 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 MKRN2OSH3BPM6 223 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 BOLA2-SMG1P6H3BVE0 249 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 H7BYZ3 331 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 K7EMI3 77 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 hCG_2039718K7EN88 272 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 K7EQM0 130 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 K7EQS6 105 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 M0R1B8 84 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 KCNK1O00180 336 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 DFFAO00273 331 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 CCRL2O00421 344 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 ZNF593O00488 134 aaPredicted RBP-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 GABRPO00591 440 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 PRMT5O14744 637 aaPredicted RBP-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 ACOX3O15254 700 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 SLC31A1O15431 190 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 ATP8B1O43520 1251 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 SYNGR1O43759 233 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 TIMM8AO60220 97 aaPredicted RBP-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 SSSCA1O60232 199 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 NEMFO60524 1076 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 KLHL41O60662 606 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 SCN2BO60939 215 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 SEC22BO75396 215 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 PGLYRP1O75594 196 aaPredicted RBP-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 TRAPPC6AO75865 159 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 PIAS1O75925 651 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 LYZL6O75951 148 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 CST7O76096 145 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 PLEKHA8P1O95397 391 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 CNIH1O95406 144 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 FGFR1OPO95684 399 aaKnown RBP-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 TTC4O95801 387 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 TMEM50AO95807 157 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 TSPAN12O95859 305 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 EPPINO95925 133 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 IGKV1D-33P01593 117 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 IGKV1-33P01594 117 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 IGLV3-1P01715 115 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 HLA-HP01893 362 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 HLA-DRB1P01911 266 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 MT-ND3P03897 115 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 ARG1P05089 322 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 ATP5G1P05496 136 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 HLA-DQB2P05538 268 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 SERPIND1P05546 499 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 SPINK8P0C7L1 97 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 IQCF3P0C7M6 154 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 CECR9P0C854 216 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 ZNF705BP0CI00 300 aaPredicted RBP-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 SPART-AS1P0CW21 52 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 CT45A6P0DMU7 189 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 CT45A5P0DMU8 189 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 CT45A7P0DMV0 189 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 TROVE2P10155 538 aaKnown RBP eCLIP-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 MCF2P10911 925 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 SLC2A1P11166 492 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 PIPP12273 146 aaPredicted RBP-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 CCL2P13500 99 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 HLA-DRB4P13762 266 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 CTSEP14091 401 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 CPMP14384 443 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 HMGA1P17096 107 aaKnown RBP-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 GAP43P17677 238 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 GABRG2P18507 467 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 IL32P24001 234 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 KDELR1P24390 212 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 PBLDP30039 288 aaPredicted RBP-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 BLVRBP30043 206 aaPredicted RBP-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 SLC6A1P30531 599 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 ALDH3A1P30838 453 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 HOXA6P31267 233 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 CD52P31358 61 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 GABRA3P34903 492 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 EVI2BP34910 448 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 PRSS3P35030 304 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 NUP62P37198 522 aaPredicted RBP-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 P2RY2P41231 377 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 ACTR1BP42025 376 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 RPS27P42677 84 aaKnown RBP-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 REG1BP48304 166 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 RGS6P49758 472 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 SERPINB9P50453 376 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 ETV1P50549 477 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 FABP6P51161 128 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 DYNLT3P51808 116 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 CCNHP51946 323 aaPredicted RBP-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 ACLYP53396 1101 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 CDH6P55285 790 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 CLDN12P56749 244 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 C21orf59P57076 290 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 SPINK7P58062 85 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 AP3S2P59780 193 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 RPS20P60866 119 aaKnown RBP-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 UBE2KP61086 200 aa-0.11□□□□□ -2.43
SCARNA16.5-201ENST00000517114 ACTR1AP61163 376 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms