RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 SLC25A44Q96H78 314 aaPredicted RBP0.75□□□□□ -2.29
RN7SKP88-201ENST00000516847 LINC00167Q96N53 147 aa0.75□□□□□ -2.29
RN7SKP88-201ENST00000516847 OR52B2Q96RD2 323 aa0.75□□□□□ -2.29
RN7SKP88-201ENST00000516847 UPK3BQ9BT76 320 aa0.75□□□□□ -2.29
RN7SKP88-201ENST00000516847 MND1Q9BWT6 205 aa0.75□□□□□ -2.29
RN7SKP88-201ENST00000516847 KRTAP17-1Q9BYP8 105 aa0.75□□□□□ -2.29
RN7SKP88-201ENST00000516847 TRIM4Q9C037 500 aa0.75□□□□□ -2.29
RN7SKP88-201ENST00000516847 C20orf27Q9GZN8 174 aa0.75□□□□□ -2.29
RN7SKP88-201ENST00000516847 TMEM222Q9H0R3 208 aa0.75□□□□□ -2.29
RN7SKP88-201ENST00000516847 ABCG5Q9H222 651 aa0.75□□□□□ -2.29
RN7SKP88-201ENST00000516847 SMDT1Q9H4I9 107 aa0.75□□□□□ -2.29
RN7SKP88-201ENST00000516847 FAM96AQ9H5X1 160 aa0.75□□□□□ -2.29
RN7SKP88-201ENST00000516847 NMNAT1Q9HAN9 279 aaPredicted RBP0.75□□□□□ -2.29
RN7SKP88-201ENST00000516847 GPR84Q9NQS5 396 aa0.75□□□□□ -2.29
RN7SKP88-201ENST00000516847 CYTL1Q9NRR1 136 aa0.75□□□□□ -2.29
RN7SKP88-201ENST00000516847 DOK5Q9P104 306 aa0.75□□□□□ -2.29
RN7SKP88-201ENST00000516847 MARCOQ9UEW3 520 aaPredicted RBP0.75□□□□□ -2.29
RN7SKP88-201ENST00000516847 RSL24D1Q9UHA3 163 aaKnown RBP0.75□□□□□ -2.29
RN7SKP88-201ENST00000516847 ZNF391Q9UJN7 358 aa0.75□□□□□ -2.29
RN7SKP88-201ENST00000516847 ANAPC10Q9UM13 185 aa0.75□□□□□ -2.29
RN7SKP88-201ENST00000516847 ANGPT4Q9Y264 503 aa0.75□□□□□ -2.29
RN7SKP88-201ENST00000516847 CARHSP1Q9Y2V2 147 aaKnown RBP0.75□□□□□ -2.29
RN7SKP88-201ENST00000516847 MMACHCQ9Y4U1 282 aa0.75□□□□□ -2.29
RN7SKP88-201ENST00000516847 ZNF638Q14966 1978 aaKnown RBP0.75□□□□□ -2.29
RN7SKP88-201ENST00000516847 ATG2BQ96BY7 2078 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 NUP155O75694 1391 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 NID2Q14112 1375 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 MTUS2Q5JR59 1369 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 DHX57Q6P158 1386 aaKnown RBP0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 KIF26AQ9ULI4 1882 aaPredicted RBP0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 PTPRJQ12913 1337 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 ZNF532Q9HCE3 1301 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 ITGB4P16144 1822 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 A0A087WUU8 490 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 A0A0B4J2C4 111 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 OR4C46A6NHA9 309 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 A8MWP6 167 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 GGTLC3B5MD39 225 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 ZNF878C9JN71 531 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 INMT-MINDY4F8WBC2 141 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 COX7A2LO14548 114 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 CNIH1O95406 144 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 CPSF4O95639 269 aaKnown RBP0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 IGKV3-11P04433 115 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 CRYGDP07320 174 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 KCNE1P15382 129 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 CD24P25063 80 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 COL8A2P25067 703 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 CRYBB3P26998 211 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 PPP1R2P41236 205 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 MAP2K4P45985 399 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 RBM11P57052 281 aaKnown RBP0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 KLF3P57682 345 aaPredicted RBP0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 RPS11P62280 158 aaKnown RBP eCLIP0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 SNRPD2P62316 118 aaKnown RBP0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 TBPL1P62380 186 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 DR1Q01658 176 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 GNA12Q03113 381 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 KRR1Q13601 381 aaKnown RBP0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 POU6F1Q14863 301 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 CDK10Q15131 360 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 LGALS9BQ3B8N2 356 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 LIN52Q52LA3 116 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 TNFAIP8L3Q5GJ75 292 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 C9orf64Q5T6V5 341 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 TEX36Q5VZQ5 186 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 GLT8D1Q68CQ7 371 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 ZNF660Q6AZW8 331 aaPredicted RBP0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 LGALS9CQ6DKI2 356 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 PPP1R2P3Q6NXS1 205 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 LPCAT3Q6P1A2 487 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 DHRS4L2Q6PKH6 230 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 RASL11AQ6T310 242 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 IGFL1Q6UW32 110 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 AMTNQ6UX39 209 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 SDIM1Q6ZPB5 146 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 TCF24Q7RTU0 167 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 OOSP2Q86WS3 158 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 GPHB5Q86YW7 130 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 BAP18Q8IXM2 172 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 UMODL1-AS1Q8N2C9 162 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 RNF182Q8N6D2 247 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 OR11H1Q8NG94 326 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 OR10P1Q8NGE3 313 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 OR10X1Q8NGY0 326 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 SGMS2Q8NHU3 365 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 MCFD2Q8NI22 146 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 RAD51AP1Q96B01 352 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 SFRP2Q96HF1 295 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 CNBD2Q96M20 576 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 PPP1R2P1Q96PQ5 205 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 KLF6Q99612 283 aaPredicted RBP0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 NIPSNAP1Q9BPW8 284 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 CMSS1Q9BQ75 279 aaKnown RBP0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 ZNF2Q9BSG1 426 aaPredicted RBP0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 KIFC1Q9BW19 673 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 RSPO3Q9BXY4 272 aaPredicted RBP0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 ULBP3Q9BZM4 244 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 AICDAQ9GZX7 198 aa0.74□□□□□ -2.29
RN7SKP88-201ENST00000516847 VCX3BQ9H321 246 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms