RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 ITGB4P16144 1822 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 OVOS2A0A0G2JMS6 1433 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TECPR2O15040 1411 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 SOGA1O94964 1423 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 FAM135BQ49AJ0 1406 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 MYOM3Q5VTT5 1437 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 VPS8Q8N3P4 1428 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TRAV9-1A0A075B6T8 112 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TRAV36DV7A0A075B6V5 113 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGHV3OR15-7A0A075B7D8 119 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 hCG_1818297A0A087WSY0 165 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 A0A087WYN8 130 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 LOC102724200A0A096LPH7 203 aaPredicted RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 A0A096LPI6 279 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGHV1-45A0A0A0MS14 117 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TMED7-TICAM2A0A0A6YYA0 188 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGHV3-72A0A0B4J1Y9 119 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TRAV5A0A0B4J249 113 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TRAV38-1A0A0B4J264 116 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGHV5-51A0A0C4DH38 117 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGHV3-66A0A0C4DH42 116 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGHV7-4-1A0A0J9YVY3 117 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGHV5-10-1A0A0J9YXX1 117 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 A0A0J9YY10 115 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TRDV1A0A1B0GX56 115 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 A0A1B0GX78 115 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 DUXBA0A1W2PPF3 345 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 A0A1W2PPR1 153 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 A0A1W2PQ67 120 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 FAM92AA1XBS5 289 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TMEM189A5PLL7 270 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 C5orf63A6NC05 138 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 NKX2-6A6NCS4 301 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 ARRDC5A6NEK1 342 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 DPRXA6NFQ7 191 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR5H14A6NHG9 310 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 EPOPA6NHQ4 379 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 RIIAD1A6NNX1 92 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF850A8MQ14 1090 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 A8MT66 165 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 LEUTXA8MZ59 168 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 LINC00587B1AMM8 73 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 NDUFC2-KCTD14E9PQ53 114 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 INMT-MINDY4F8WBC2 141 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 INS-IGF2F8WCM5 200 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 C19orf84I3L1E1 186 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 K7ERU9 68 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 M0R381 172 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 ISLRO14498 428 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 MRASO14807 208 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 SOCS1O15524 211 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 DLEU1O43261 78 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 CHST10O43529 356 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 GSTZ1O43708 216 aaPredicted RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 CD5LO43866 347 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF354AO60765 605 aaPredicted RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 GGCTO75223 188 aaKnown RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 SRSF10O75494 262 aaKnown RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 BANF1O75531 89 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 DEDDO75618 318 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TNFSF13O75888 250 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 SUPT7LO94864 414 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TNFSF15O95150 251 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 FSTL3O95633 263 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 LY6G6DO95868 133 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 NCR2O95944 276 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 CXorf1O96002 111 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 LTAP01374 205 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 IFNA10P01566 189 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 IFNGP01579 166 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGLV2-23P01705 113 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGHV3-11P01762 117 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 HLA-DQA1P01909 254 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 APCSP02743 223 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 C1QCP02747 245 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 OPN1SWP03999 348 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 HSPB1P04792 205 aaKnown RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 HLA-DQB2P05538 268 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 CSN2P05814 226 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGHV4-34P06331 123 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 ADRA2AP08913 450 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 CD7P09564 240 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 SCTP09683 121 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TFPTP0C1Z6 253 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TSPAN19P0C672 248 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR56A5P0C7T3 313 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 P0C879 139 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 UBBP0CG47 229 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 SMIM6P0DI80 62 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 MPC1LP0DKB6 136 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 P0DMU3 169 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 FAM231AP0DMU4 169 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 FAM231CP0DMU5 169 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 SMIM10L2AP0DMW4 78 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 SMIM10L2BP0DMW5 78 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGHV1-8P0DP01 117 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 PTHLHP12272 177 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 FOLR2P14207 255 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 CPMP14384 443 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 IL1RNP18510 177 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms