RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 TMEM250H0YL14 139 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 KCNK1O00180 336 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 IFNA6P05013 189 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 MLNP12872 115 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 IL1RNP18510 177 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 NELFEP18615 380 aaKnown RBP1.96□□□□□ -2.1
HERC4-215ENST00000515753 PSMA1P25786 263 aaKnown RBP1.96□□□□□ -2.1
HERC4-215ENST00000515753 IMPA1P29218 277 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 CAPZBP47756 277 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 RAB25P57735 213 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 ATP5G2Q06055 141 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 TMEM176BQ3YBM2 270 aaPredicted RBP1.96□□□□□ -2.1
HERC4-215ENST00000515753 MORN3Q6PF18 240 aaPredicted RBP1.96□□□□□ -2.1
HERC4-215ENST00000515753 WDR59Q6PJI9 974 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 XKRXQ6PP77 449 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 SHISA6Q6ZSJ9 500 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 OLIG3Q7RTU3 272 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 PRNTQ86SH4 94 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 WDR86Q86TI4 376 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 LINC00596Q86U02 117 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 LINC01551Q86U37 167 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 OOSP2Q86WS3 158 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 ZNF786Q8N393 782 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 ARIH2OSQ8N7S6 290 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 ZIC4Q8N9L1 334 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 ST6GALNAC3Q8NDV1 305 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 OR5D18Q8NGL1 313 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 OR4C13Q8NGP0 309 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 OR5K1Q8NHB7 308 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 CCL4L1Q8NHW4 92 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 FAM57AQ8TBR7 257 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 HAVCR2Q8TDQ0 301 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 C16orf78Q8WTQ4 265 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 TWIST2Q8WVJ9 160 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 CYGBQ8WWM9 190 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 TAMM41Q96BW9 452 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 COX14Q96I36 57 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 CCDC42Q96M95 316 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 PPP1R2P1Q96PQ5 205 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 TBL1YQ9BQ87 522 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 ANAPC13Q9BS18 74 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 MAP1LC3AQ9H492 121 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 TMEM216Q9P0N5 145 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 RBM12B-AS1Q9P1G2 102 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 TAC3Q9UHF0 121 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 ZNF222Q9UK12 451 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 NEU3Q9UQ49 428 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 ZNF780BQ9Y6R6 833 aa1.96□□□□□ -2.1
HERC4-215ENST00000515753 LOC102724200A0A096LPH7 203 aaPredicted RBP1.95□□□□□ -2.1
HERC4-215ENST00000515753 CENPVL3A0A0U1RRI6 287 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 TEX50A0A1B0GTY4 177 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 A0A1W2PQL4 384 aaPredicted RBP1.95□□□□□ -2.1
HERC4-215ENST00000515753 C5orf63A6NC05 138 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 TLCD2A6NGC4 264 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 ARGFXA6NJG6 315 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 TMEM114B3SHH9 223 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 E7EQ34 232 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 LGALS9O00182 355 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 NSA2O95478 260 aaKnown RBP1.95□□□□□ -2.1
HERC4-215ENST00000515753 SOD3P08294 240 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 RPS17P08708 135 aaKnown RBP1.95□□□□□ -2.1
HERC4-215ENST00000515753 LINC00614P0C842 121 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 ZNF823P16415 610 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 MYL12AP19105 171 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 MPIP34949 423 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 OPRK1P41145 380 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 KIR3DL2P43630 455 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 OMPP47874 163 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 HSPA13P48723 471 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 IDH2P48735 452 aaKnown RBP1.95□□□□□ -2.1
HERC4-215ENST00000515753 SPINT3P49223 89 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 NUDT2P50583 147 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 IDH3GP51553 393 aaPredicted RBP1.95□□□□□ -2.1
HERC4-215ENST00000515753 H2BFSP57053 126 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 TAS2R43P59537 309 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 SMAGPQ0VAQ4 97 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 SRSF6Q13247 344 aaKnown RBP1.95□□□□□ -2.1
HERC4-215ENST00000515753 EBI3Q14213 229 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 TTMPQ5BVD1 217 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 HENMT1Q5T8I9 393 aaKnown RBP1.95□□□□□ -2.1
HERC4-215ENST00000515753 NXNL2Q5VZ03 156 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 ZNF773Q6PK81 442 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 TIFABQ6ZNK6 161 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 Q6ZS92 163 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 FA2HQ7L5A8 372 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 PDPNQ86YL7 162 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 LRRC34Q8IZ02 419 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 ZDHHC22Q8N966 263 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 OR2Z1Q8NG97 314 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 OR9A2Q8NGT5 310 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 OLFM3Q96PB7 478 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 MCEEQ96PE7 176 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 LINC01587Q99440 93 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 NDFIP1Q9BT67 221 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 FBXL15Q9H469 300 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 SLC2A9Q9NRM0 540 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 CA10Q9NS85 328 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 ZNF355PQ9NSJ1 428 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 TAS2R5Q9NYW4 299 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 GLS2Q9UI32 602 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms