RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 TMEM128Q5BJH2 165 aa16.81■□□□□ 0.28
LSM6-207ENST00000515311 LIAT1Q6ZQX7 453 aa16.81■□□□□ 0.28
LSM6-207ENST00000515311 SLC25A42Q86VD7 318 aa16.81■□□□□ 0.28
LSM6-207ENST00000515311 SPAG16Q8N0X2 631 aa16.81■□□□□ 0.28
LSM6-207ENST00000515311 Q8N6K4 173 aa16.81■□□□□ 0.28
LSM6-207ENST00000515311 OR4C13Q8NGP0 309 aa16.81■□□□□ 0.28
LSM6-207ENST00000515311 EAF1Q96JC9 268 aaPredicted RBP16.81■□□□□ 0.28
LSM6-207ENST00000515311 JMJD8Q96S16 334 aa16.81■□□□□ 0.28
LSM6-207ENST00000515311 RNF5Q99942 180 aa16.81■□□□□ 0.28
LSM6-207ENST00000515311 NAA60Q9H7X0 242 aa16.81■□□□□ 0.28
LSM6-207ENST00000515311 VPREB3Q9UKI3 123 aa16.81■□□□□ 0.28
LSM6-207ENST00000515311 TEX13DA0A0J9YY54 714 aaPredicted RBP16.8■□□□□ 0.28
LSM6-207ENST00000515311 C3orf85A0A1B0GTC6 90 aa16.8■□□□□ 0.28
LSM6-207ENST00000515311 A6NDX4 124 aa16.8■□□□□ 0.28
LSM6-207ENST00000515311 DNAJC9-AS1A6NH13 148 aa16.8■□□□□ 0.28
LSM6-207ENST00000515311 ARPC1BO15143 372 aaKnown RBP16.8■□□□□ 0.28
LSM6-207ENST00000515311 AKR1C4P17516 323 aa16.8■□□□□ 0.28
LSM6-207ENST00000515311 TMEM177Q53S58 311 aa16.8■□□□□ 0.28
LSM6-207ENST00000515311 OR2B11Q5JQS5 317 aa16.8■□□□□ 0.28
LSM6-207ENST00000515311 C11orf88Q6PI97 169 aa16.8■□□□□ 0.28
LSM6-207ENST00000515311 SGPP2Q8IWX5 399 aa16.8■□□□□ 0.28
LSM6-207ENST00000515311 FLYWCH2Q96CP2 140 aaKnown RBP16.8■□□□□ 0.28
LSM6-207ENST00000515311 FLVCR2Q9UPI3 526 aa16.8■□□□□ 0.28
LSM6-207ENST00000515311 RAMP3O60896 148 aa16.79■□□□□ 0.28
LSM6-207ENST00000515311 CRYZL1O95825 349 aa16.79■□□□□ 0.28
LSM6-207ENST00000515311 TMEM11P17152 192 aa16.79■□□□□ 0.28
LSM6-207ENST00000515311 MECP2P51608 486 aaKnown RBP16.79■□□□□ 0.28
LSM6-207ENST00000515311 DHODHQ02127 395 aa16.79■□□□□ 0.28
LSM6-207ENST00000515311 SLC9A3R2Q15599 337 aa16.79■□□□□ 0.28
LSM6-207ENST00000515311 RGS21Q2M5E4 152 aa16.79■□□□□ 0.28
LSM6-207ENST00000515311 FBLN7Q53RD9 439 aa16.79■□□□□ 0.28
LSM6-207ENST00000515311 OR8H1Q8NGG4 311 aa16.79■□□□□ 0.28
LSM6-207ENST00000515311 OSR1Q8TAX0 266 aaPredicted RBP16.79■□□□□ 0.28
LSM6-207ENST00000515311 ZFAND2BQ8WV99 257 aa16.79■□□□□ 0.28
LSM6-207ENST00000515311 GALNT14Q96FL9 552 aa16.79■□□□□ 0.28
LSM6-207ENST00000515311 ALX4Q9H161 411 aaPredicted RBP16.79■□□□□ 0.28
LSM6-207ENST00000515311 TRAV6A0A075B6T7 132 aa16.78■□□□□ 0.28
LSM6-207ENST00000515311 H2AFB2P0C5Z0 115 aa16.78■□□□□ 0.28
LSM6-207ENST00000515311 SUPT4H1P63272 117 aaKnown RBP16.78■□□□□ 0.28
LSM6-207ENST00000515311 PLET1Q6UQ28 207 aa16.78■□□□□ 0.28
LSM6-207ENST00000515311 C16orf82Q7Z2V1 217 aa16.78■□□□□ 0.28
LSM6-207ENST00000515311 RBM14Q96PK6 669 aaKnown RBP16.78■□□□□ 0.28
LSM6-207ENST00000515311 TP53RKQ96S44 253 aa16.78■□□□□ 0.28
LSM6-207ENST00000515311 PLEKHA2Q9HB19 425 aa16.78■□□□□ 0.28
LSM6-207ENST00000515311 ESM1Q9NQ30 184 aa16.78■□□□□ 0.28
LSM6-207ENST00000515311 KCNIP3Q9Y2W7 256 aa16.78■□□□□ 0.28
LSM6-207ENST00000515311 TCF21O43680 179 aa16.77■□□□□ 0.28
LSM6-207ENST00000515311 PEX14O75381 377 aa16.77■□□□□ 0.28
LSM6-207ENST00000515311 OR2F2O95006 317 aa16.77■□□□□ 0.28
LSM6-207ENST00000515311 ANXA7P20073 488 aaKnown RBP16.77■□□□□ 0.28
LSM6-207ENST00000515311 LGALS7P47929 136 aa16.77■□□□□ 0.28
LSM6-207ENST00000515311 RAG2P55895 527 aa16.77■□□□□ 0.28
LSM6-207ENST00000515311 HNF4GQ14541 408 aa16.77■□□□□ 0.28
LSM6-207ENST00000515311 LY6EQ16553 131 aa16.77■□□□□ 0.28
LSM6-207ENST00000515311 ZNF585BQ52M93 769 aa16.77■□□□□ 0.28
LSM6-207ENST00000515311 CCBE1Q6UXH8 406 aaPredicted RBP16.77■□□□□ 0.28
LSM6-207ENST00000515311 TSNAXQ99598 290 aaKnown RBP16.77■□□□□ 0.28
LSM6-207ENST00000515311 CHIAQ9BZP6 476 aa16.77■□□□□ 0.28
LSM6-207ENST00000515311 TMEM222Q9H0R3 208 aa16.77■□□□□ 0.28
LSM6-207ENST00000515311 RAB18Q9NP72 206 aa16.77■□□□□ 0.28
LSM6-207ENST00000515311 COMMD9Q9P000 198 aa16.77■□□□□ 0.28
LSM6-207ENST00000515311 SHOXO15266 292 aa16.76■□□□□ 0.27
LSM6-207ENST00000515311 SPDEFO95238 335 aa16.76■□□□□ 0.27
LSM6-207ENST00000515311 HPRT1P00492 218 aa16.76■□□□□ 0.27
LSM6-207ENST00000515311 SERPINE2P07093 398 aa16.76■□□□□ 0.27
LSM6-207ENST00000515311 OR5AC1P0C628 307 aa16.76■□□□□ 0.27
LSM6-207ENST00000515311 VSIG10L2P0DP72 767 aa16.76■□□□□ 0.27
LSM6-207ENST00000515311 ANXA3P12429 323 aa16.76■□□□□ 0.27
LSM6-207ENST00000515311 RPA2P15927 270 aa16.76■□□□□ 0.27
LSM6-207ENST00000515311 UCP1P25874 307 aa16.76■□□□□ 0.27
LSM6-207ENST00000515311 RPS16P62249 146 aaKnown RBP16.76■□□□□ 0.27
LSM6-207ENST00000515311 TMEM219Q86XT9 240 aa16.76■□□□□ 0.27
LSM6-207ENST00000515311 NPBQ8NG41 125 aa16.76■□□□□ 0.27
LSM6-207ENST00000515311 RBMXL1Q96E39 390 aaKnown RBP16.76■□□□□ 0.27
LSM6-207ENST00000515311 RITA1Q96K30 269 aa16.76■□□□□ 0.27
LSM6-207ENST00000515311 HARBI1Q96MB7 349 aa16.76■□□□□ 0.27
LSM6-207ENST00000515311 AIFM2Q9BRQ8 373 aa16.76■□□□□ 0.27
LSM6-207ENST00000515311 MARVELD1Q9BSK0 173 aa16.76■□□□□ 0.27
LSM6-207ENST00000515311 SLC25A33Q9BSK2 321 aa16.76■□□□□ 0.27
LSM6-207ENST00000515311 HRASP01112 189 aa16.75■□□□□ 0.27
LSM6-207ENST00000515311 IFNA2P01563 188 aa16.75■□□□□ 0.27
LSM6-207ENST00000515311 RNASE1P07998 156 aaKnown RBP16.75■□□□□ 0.27
LSM6-207ENST00000515311 OR4E1P0C645 316 aa16.75■□□□□ 0.27
LSM6-207ENST00000515311 LPAR6P43657 344 aa16.75■□□□□ 0.27
LSM6-207ENST00000515311 PPP1R1AQ13522 171 aa16.75■□□□□ 0.27
LSM6-207ENST00000515311 GLYATL2Q8WU03 294 aa16.75■□□□□ 0.27
LSM6-207ENST00000515311 PLSCR3Q9NRY6 295 aa16.75■□□□□ 0.27
LSM6-207ENST00000515311 TNFRSF19Q9NS68 423 aa16.75■□□□□ 0.27
LSM6-207ENST00000515311 C1RLQ9NZP8 487 aa16.75■□□□□ 0.27
LSM6-207ENST00000515311 MOB4Q9Y3A3 225 aa16.75■□□□□ 0.27
LSM6-207ENST00000515311 ZFHX3Q15911 3703 aa16.75■□□□□ 0.27
LSM6-207ENST00000515311 M0QZK8 103 aa16.74■□□□□ 0.27
LSM6-207ENST00000515311 NBR2O15453 112 aa16.74■□□□□ 0.27
LSM6-207ENST00000515311 CHST1O43916 411 aa16.74■□□□□ 0.27
LSM6-207ENST00000515311 S1PR2O95136 353 aa16.74■□□□□ 0.27
LSM6-207ENST00000515311 NDUFA3O95167 84 aa16.74■□□□□ 0.27
LSM6-207ENST00000515311 SFT2D2O95562 160 aa16.74■□□□□ 0.27
LSM6-207ENST00000515311 SPNP16150 400 aa16.74■□□□□ 0.27
LSM6-207ENST00000515311 VAMP1P23763 118 aa16.74■□□□□ 0.27
LSM6-207ENST00000515311 SRPXP78539 464 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms