RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 CEBPEQ15744 281 aa13.75□□□□□ -0.21
TRIM41-207ENST00000515223 RTTNQ86VV8 2226 aa13.75□□□□□ -0.21
TRIM41-207ENST00000515223 PTBP3O95758 552 aaKnown RBP13.75□□□□□ -0.21
TRIM41-207ENST00000515223 RECKO95980 971 aa13.75□□□□□ -0.21
TRIM41-207ENST00000515223 FCGR2BP31994 310 aaPredicted RBP13.75□□□□□ -0.21
TRIM41-207ENST00000515223 FAM216AQ8WUB2 273 aa13.75□□□□□ -0.21
TRIM41-207ENST00000515223 NPPCP23582 126 aa13.75□□□□□ -0.21
TRIM41-207ENST00000515223 FAM209BQ5JX69 171 aa13.75□□□□□ -0.21
TRIM41-207ENST00000515223 DPPA3Q6W0C5 159 aa13.75□□□□□ -0.21
TRIM41-207ENST00000515223 ABHD17AQ96GS6 310 aa13.75□□□□□ -0.21
TRIM41-207ENST00000515223 PIKFYVEQ9Y2I7 2098 aa13.75□□□□□ -0.21
TRIM41-207ENST00000515223 C2orf68Q2NKX9 166 aa13.75□□□□□ -0.21
TRIM41-207ENST00000515223 IGHV3OR16-10A0A075B7F0 116 aa13.74□□□□□ -0.21
TRIM41-207ENST00000515223 A0A087X0M5 115 aa13.74□□□□□ -0.21
TRIM41-207ENST00000515223 A0A1B0GX30 115 aa13.74□□□□□ -0.21
TRIM41-207ENST00000515223 NPIPB11E5RHQ5 1161 aa13.74□□□□□ -0.21
TRIM41-207ENST00000515223 APCSP02743 223 aa13.74□□□□□ -0.21
TRIM41-207ENST00000515223 STAG3L2P0CL84 134 aa13.74□□□□□ -0.21
TRIM41-207ENST00000515223 GLRXP35754 106 aa13.74□□□□□ -0.21
TRIM41-207ENST00000515223 PDCD11Q14690 1871 aaKnown RBP13.74□□□□□ -0.21
TRIM41-207ENST00000515223 DLL3Q9NYJ7 618 aa13.74□□□□□ -0.21
TRIM41-207ENST00000515223 HSPB7Q9UBY9 170 aa13.74□□□□□ -0.21
TRIM41-207ENST00000515223 A0A0G2JK05 382 aa13.74□□□□□ -0.21
TRIM41-207ENST00000515223 MMP9P14780 707 aa13.74□□□□□ -0.21
TRIM41-207ENST00000515223 SAXO1Q8IYX7 474 aa13.74□□□□□ -0.21
TRIM41-207ENST00000515223 OR8A1Q8NGG7 326 aa13.74□□□□□ -0.21
TRIM41-207ENST00000515223 FAM168AQ92567 244 aa13.74□□□□□ -0.21
TRIM41-207ENST00000515223 MEGF10Q96KG7 1140 aa13.74□□□□□ -0.21
TRIM41-207ENST00000515223 A0A1W2PP11 408 aa13.74□□□□□ -0.21
TRIM41-207ENST00000515223 CGB1A6NKQ9 187 aa13.74□□□□□ -0.21
TRIM41-207ENST00000515223 H3BQ15 152 aa13.74□□□□□ -0.21
TRIM41-207ENST00000515223 SEC11BP0C7V7 166 aa13.74□□□□□ -0.21
TRIM41-207ENST00000515223 BTCP35070 178 aa13.74□□□□□ -0.21
TRIM41-207ENST00000515223 QTRT1Q9BXR0 403 aaKnown RBP13.74□□□□□ -0.21
TRIM41-207ENST00000515223 BET1LQ9NYM9 111 aa13.74□□□□□ -0.21
TRIM41-207ENST00000515223 PHLDA3Q9Y5J5 127 aa13.74□□□□□ -0.21
TRIM41-207ENST00000515223 UQCRFS1P47985 274 aa13.74□□□□□ -0.21
TRIM41-207ENST00000515223 ZNF343Q6P1L6 599 aa13.74□□□□□ -0.21
TRIM41-207ENST00000515223 PITX3O75364 302 aa13.73□□□□□ -0.21
TRIM41-207ENST00000515223 PSG9Q00887 426 aa13.73□□□□□ -0.21
TRIM41-207ENST00000515223 VAX1Q5SQQ9 334 aa13.73□□□□□ -0.21
TRIM41-207ENST00000515223 SNURFLB1AK76 121 aa13.73□□□□□ -0.21
TRIM41-207ENST00000515223 SCTP09683 121 aa13.73□□□□□ -0.21
TRIM41-207ENST00000515223 LCTP09848 1927 aa13.73□□□□□ -0.21
TRIM41-207ENST00000515223 HSPE1P61604 102 aaKnown RBP13.73□□□□□ -0.21
TRIM41-207ENST00000515223 ATRAIDQ6UW56 229 aa13.73□□□□□ -0.21
TRIM41-207ENST00000515223 LSM10Q969L4 123 aaKnown RBP13.73□□□□□ -0.21
TRIM41-207ENST00000515223 RSG1Q9BU20 258 aa13.73□□□□□ -0.21
TRIM41-207ENST00000515223 YAE1D1Q9NRH1 226 aa13.73□□□□□ -0.21
TRIM41-207ENST00000515223 CSRP1P21291 193 aaKnown RBP13.73□□□□□ -0.21
TRIM41-207ENST00000515223 ATP6V0CP27449 155 aa13.73□□□□□ -0.21
TRIM41-207ENST00000515223 WDFY1Q8IWB7 410 aa13.73□□□□□ -0.21
TRIM41-207ENST00000515223 JMJD8Q96S16 334 aa13.73□□□□□ -0.21
TRIM41-207ENST00000515223 INTS1Q8N201 2190 aaKnown RBP13.73□□□□□ -0.21
TRIM41-207ENST00000515223 IER3P46695 156 aa13.73□□□□□ -0.21
TRIM41-207ENST00000515223 CEBPDP49716 269 aaPredicted RBP13.73□□□□□ -0.21
TRIM41-207ENST00000515223 FXYD3Q14802 87 aa13.73□□□□□ -0.21
TRIM41-207ENST00000515223 OR4X2Q8NGF9 303 aa13.73□□□□□ -0.21
TRIM41-207ENST00000515223 SMIM12Q96EX1 92 aa13.73□□□□□ -0.21
TRIM41-207ENST00000515223 GALNT14Q96FL9 552 aa13.73□□□□□ -0.21
TRIM41-207ENST00000515223 C1QL1O75973 258 aa13.72□□□□□ -0.21
TRIM41-207ENST00000515223 WDR25Q64LD2 544 aaPredicted RBP13.72□□□□□ -0.21
TRIM41-207ENST00000515223 OR5AU1Q8NGC0 362 aa13.72□□□□□ -0.21
TRIM41-207ENST00000515223 EIF3GO75821 320 aaKnown RBP eCLIP13.72□□□□□ -0.21
TRIM41-207ENST00000515223 ISG15P05161 165 aa13.72□□□□□ -0.21
TRIM41-207ENST00000515223 MDKP21741 143 aaPredicted RBP13.72□□□□□ -0.21
TRIM41-207ENST00000515223 RPL29P47914 159 aaKnown RBP13.72□□□□□ -0.21
TRIM41-207ENST00000515223 PQLC2Q6ZP29 291 aa13.72□□□□□ -0.21
TRIM41-207ENST00000515223 SRXN1Q9BYN0 137 aa13.72□□□□□ -0.21
TRIM41-207ENST00000515223 ZNHIT1O43257 154 aa13.72□□□□□ -0.21
TRIM41-207ENST00000515223 HOXA6P31267 233 aa13.72□□□□□ -0.21
TRIM41-207ENST00000515223 ZNF502Q8TBZ5 544 aa13.72□□□□□ -0.21
TRIM41-207ENST00000515223 HSF4Q9ULV5 492 aa13.72□□□□□ -0.21
TRIM41-207ENST00000515223 CBY3A6NI87 242 aa13.71□□□□□ -0.21
TRIM41-207ENST00000515223 HERPUD1Q15011 391 aa13.71□□□□□ -0.21
TRIM41-207ENST00000515223 TXNDC17Q9BRA2 123 aa13.71□□□□□ -0.21
TRIM41-207ENST00000515223 CHRNA10Q9GZZ6 450 aa13.71□□□□□ -0.21
TRIM41-207ENST00000515223 PGPA6NDG6 321 aa13.71□□□□□ -0.21
TRIM41-207ENST00000515223 GPX1P07203 203 aa13.71□□□□□ -0.21
TRIM41-207ENST00000515223 SULT1A2P50226 295 aa13.71□□□□□ -0.21
TRIM41-207ENST00000515223 MFAP2P55001 183 aa13.71□□□□□ -0.21
TRIM41-207ENST00000515223 ZNF880Q6PDB4 577 aa13.71□□□□□ -0.21
TRIM41-207ENST00000515223 FAM57AQ8TBR7 257 aa13.71□□□□□ -0.21
TRIM41-207ENST00000515223 IGLV1-36A0A0B4J1U3 117 aa13.71□□□□□ -0.21
TRIM41-207ENST00000515223 H1FOOQ8IZA3 346 aaPredicted RBP13.71□□□□□ -0.21
TRIM41-207ENST00000515223 RAB24Q969Q5 203 aa13.71□□□□□ -0.21
TRIM41-207ENST00000515223 CDC42EP3Q9UKI2 254 aa13.71□□□□□ -0.21
TRIM41-207ENST00000515223 RALGAPA2Q2PPJ7 1873 aa13.71□□□□□ -0.21
TRIM41-207ENST00000515223 TGFAP01135 160 aa13.71□□□□□ -0.22
TRIM41-207ENST00000515223 RPS20P60866 119 aaKnown RBP13.71□□□□□ -0.22
TRIM41-207ENST00000515223 ACSF3Q4G176 576 aaPredicted RBP13.71□□□□□ -0.22
TRIM41-207ENST00000515223 CASP8AP2Q9UKL3 1982 aa13.71□□□□□ -0.22
TRIM41-207ENST00000515223 IGKV3D-11A0A0A0MRZ8 115 aa13.71□□□□□ -0.22
TRIM41-207ENST00000515223 TRBV5-7A0A0A0MS05 114 aa13.71□□□□□ -0.22
TRIM41-207ENST00000515223 IGKV3-11P04433 115 aa13.71□□□□□ -0.22
TRIM41-207ENST00000515223 SNRPCP09234 159 aaKnown RBP13.71□□□□□ -0.22
TRIM41-207ENST00000515223 SSTR5P35346 364 aa13.71□□□□□ -0.22
TRIM41-207ENST00000515223 TMEM45BQ96B21 275 aa13.71□□□□□ -0.22
TRIM41-207ENST00000515223 LINC00470Q9BZP3 86 aa13.71□□□□□ -0.22
TRIM41-207ENST00000515223 RTN4RQ9BZR6 473 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms