RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 DEFB125Q8N687 156 aa6.35□□□□□ -1.39
PDLIM5-219ENST00000514743 NPFFR1Q9GZQ6 430 aa6.35□□□□□ -1.39
PDLIM5-219ENST00000514743 FNDC4Q9H6D8 234 aaPredicted RBP6.35□□□□□ -1.39
PDLIM5-219ENST00000514743 KIAA1456Q9P272 454 aa6.35□□□□□ -1.39
PDLIM5-219ENST00000514743 J3QR06 171 aa6.35□□□□□ -1.39
PDLIM5-219ENST00000514743 HMGB3O15347 200 aaKnown RBP6.35□□□□□ -1.39
PDLIM5-219ENST00000514743 H2BFMP0C1H6 154 aa6.35□□□□□ -1.39
PDLIM5-219ENST00000514743 NPY1RP25929 384 aa6.35□□□□□ -1.39
PDLIM5-219ENST00000514743 OR3A4PP47883 348 aa6.35□□□□□ -1.39
PDLIM5-219ENST00000514743 GNG4P50150 75 aa6.35□□□□□ -1.39
PDLIM5-219ENST00000514743 CLDN6P56747 220 aa6.35□□□□□ -1.39
PDLIM5-219ENST00000514743 FAM3BP58499 235 aaPredicted RBP6.35□□□□□ -1.39
PDLIM5-219ENST00000514743 SLC25A47Q6Q0C1 308 aa6.35□□□□□ -1.39
PDLIM5-219ENST00000514743 FAM219AQ8IW50 185 aa6.35□□□□□ -1.39
PDLIM5-219ENST00000514743 OR5B12Q96R08 314 aa6.35□□□□□ -1.39
PDLIM5-219ENST00000514743 PBOV1Q9GZY1 135 aa6.35□□□□□ -1.39
PDLIM5-219ENST00000514743 MOB1AQ9H8S9 216 aa6.35□□□□□ -1.39
PDLIM5-219ENST00000514743 PROK2Q9HC23 129 aa6.35□□□□□ -1.39
PDLIM5-219ENST00000514743 PLA2G2EQ9NZK7 142 aa6.35□□□□□ -1.39
PDLIM5-219ENST00000514743 B4GALT7Q9UBV7 327 aa6.35□□□□□ -1.39
PDLIM5-219ENST00000514743 IGHV1-45A0A0A0MS14 117 aa6.34□□□□□ -1.39
PDLIM5-219ENST00000514743 CDAP32320 146 aa6.34□□□□□ -1.39
PDLIM5-219ENST00000514743 SRP14P37108 136 aaKnown RBP6.34□□□□□ -1.39
PDLIM5-219ENST00000514743 LCN2P80188 198 aa6.34□□□□□ -1.39
PDLIM5-219ENST00000514743 MPV17L2Q567V2 206 aa6.34□□□□□ -1.39
PDLIM5-219ENST00000514743 UFSP1Q6NVU6 142 aa6.34□□□□□ -1.39
PDLIM5-219ENST00000514743 GVQW1Q8N7I0 195 aa6.34□□□□□ -1.39
PDLIM5-219ENST00000514743 TMEM229BQ8NBD8 167 aa6.34□□□□□ -1.39
PDLIM5-219ENST00000514743 OR10V1Q8NGI7 309 aa6.34□□□□□ -1.39
PDLIM5-219ENST00000514743 MAFAQ8NHW3 353 aaPredicted RBP6.34□□□□□ -1.39
PDLIM5-219ENST00000514743 AQP3Q92482 292 aa6.34□□□□□ -1.39
PDLIM5-219ENST00000514743 MSI2Q96DH6 328 aaKnown RBP6.34□□□□□ -1.39
PDLIM5-219ENST00000514743 SPACA5Q96QH8 159 aa6.34□□□□□ -1.39
PDLIM5-219ENST00000514743 SAMD10Q9BYL1 202 aa6.34□□□□□ -1.39
PDLIM5-219ENST00000514743 SMDT1Q9H4I9 107 aa6.34□□□□□ -1.39
PDLIM5-219ENST00000514743 MEGF11A6BM72 1044 aa6.34□□□□□ -1.39
PDLIM5-219ENST00000514743 ANKRD30BLA7E2S9 258 aa6.34□□□□□ -1.39
PDLIM5-219ENST00000514743 KLF7O75840 302 aaPredicted RBP6.34□□□□□ -1.39
PDLIM5-219ENST00000514743 COX6A1P12074 109 aa6.34□□□□□ -1.39
PDLIM5-219ENST00000514743 ZNF17P17021 662 aa6.34□□□□□ -1.39
PDLIM5-219ENST00000514743 GPM6AP51674 278 aa6.34□□□□□ -1.39
PDLIM5-219ENST00000514743 ADIRFQ15847 76 aa6.34□□□□□ -1.39
PDLIM5-219ENST00000514743 GLIPR1L1Q6UWM5 242 aa6.34□□□□□ -1.39
PDLIM5-219ENST00000514743 CYB561D1Q8N8Q1 229 aa6.34□□□□□ -1.39
PDLIM5-219ENST00000514743 OR5AU1Q8NGC0 362 aa6.34□□□□□ -1.39
PDLIM5-219ENST00000514743 OR5D13Q8NGL4 314 aa6.34□□□□□ -1.39
PDLIM5-219ENST00000514743 PRSS50Q9UI38 385 aa6.34□□□□□ -1.39
PDLIM5-219ENST00000514743 SLC22A20A6NK97 555 aa6.34□□□□□ -1.4
PDLIM5-219ENST00000514743 ZNF878C9JN71 531 aa6.34□□□□□ -1.4
PDLIM5-219ENST00000514743 E9PLN8 166 aa6.34□□□□□ -1.4
PDLIM5-219ENST00000514743 NTN3O00634 580 aaPredicted RBP6.34□□□□□ -1.4
PDLIM5-219ENST00000514743 NUPR1O60356 82 aa6.34□□□□□ -1.4
PDLIM5-219ENST00000514743 JMJD7P0C870 316 aa6.34□□□□□ -1.4
PDLIM5-219ENST00000514743 NTF3P20783 257 aa6.34□□□□□ -1.4
PDLIM5-219ENST00000514743 PPP1CCP36873 323 aaKnown RBP6.34□□□□□ -1.4
PDLIM5-219ENST00000514743 OR8B8Q15620 311 aa6.34□□□□□ -1.4
PDLIM5-219ENST00000514743 ACTL10Q5JWF8 245 aa6.34□□□□□ -1.4
PDLIM5-219ENST00000514743 TGIF2LYQ8IUE0 185 aa6.34□□□□□ -1.4
PDLIM5-219ENST00000514743 TMEM116Q8NCL8 245 aa6.34□□□□□ -1.4
PDLIM5-219ENST00000514743 OR8B12Q8NGG6 310 aa6.34□□□□□ -1.4
PDLIM5-219ENST00000514743 IMMP1LQ96LU5 166 aa6.34□□□□□ -1.4
PDLIM5-219ENST00000514743 C1orf147Q96MC9 270 aaPredicted RBP6.34□□□□□ -1.4
PDLIM5-219ENST00000514743 UHRF2Q96PU4 802 aa6.34□□□□□ -1.4
PDLIM5-219ENST00000514743 COL25A1Q9BXS0 654 aaPredicted RBP6.34□□□□□ -1.4
PDLIM5-219ENST00000514743 SH2D2AQ9NP31 389 aa6.34□□□□□ -1.4
PDLIM5-219ENST00000514743 PRDM6Q9NQX0 595 aa6.34□□□□□ -1.4
PDLIM5-219ENST00000514743 OR1A1Q9P1Q5 309 aa6.34□□□□□ -1.4
PDLIM5-219ENST00000514743 C19orf25Q9UFG5 118 aaPredicted RBP6.34□□□□□ -1.4
PDLIM5-219ENST00000514743 A0A087WX48 190 aa6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 MUC21A0A0G2JKD1 596 aa6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 MUC21A0A140T8X8 626 aa6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 RBFOX3A6NFN3 312 aa6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 PATE3B3GLJ2 98 aa6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 NKX2-8O15522 239 aa6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 CYB5AP00167 134 aa6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 WNT2P09544 360 aa6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 VSIG8P0DPA2 414 aa6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 EDN2P20800 178 aa6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 GLRXP35754 106 aa6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 TCL1AP56279 114 aa6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 CLRN1P58418 232 aa6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 MEF2CQ06413 473 aaPredicted RBP6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 MUC21Q5SSG8 566 aa6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 CRIP3Q6Q6R5 217 aa6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 ASCL5Q7RTU5 278 aa6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 DTX1Q86Y01 620 aa6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 APOBEC3DQ96AK3 386 aaPredicted RBP6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 CDX2Q99626 313 aaPredicted RBP6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 PECRQ9BY49 303 aa6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 DEFB126Q9BYW3 111 aa6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 TMEM242Q9NWH2 141 aa6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 LOC102725191A0A1B0GVB3 256 aa6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 MED19A0JLT2 244 aaPredicted RBP6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 CER1O95813 267 aa6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 IGHG1P01857 330 aa6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 HBZP02008 142 aa6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 SPINK8P0C7L1 97 aa6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 SFTPDP35247 375 aa6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 CLEC12BQ2HXU8 276 aa6.33□□□□□ -1.4
PDLIM5-219ENST00000514743 ZNF787Q6DD87 383 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms