RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 PACRGQ96M98 296 aaPredicted RBP6.33□□□□□ -1.4
CCDC30-214ENST00000514642 TMEM133Q9H2Q1 129 aa6.33□□□□□ -1.4
CCDC30-214ENST00000514642 TGFBR3LH3BV60 316 aa6.33□□□□□ -1.4
CCDC30-214ENST00000514642 IGHV1-46P01743 117 aa6.33□□□□□ -1.4
CCDC30-214ENST00000514642 LINC00271P0C7V0 271 aa6.33□□□□□ -1.4
CCDC30-214ENST00000514642 RND2P52198 227 aa6.33□□□□□ -1.4
CCDC30-214ENST00000514642 HIST1H1AQ02539 215 aaPredicted RBP6.33□□□□□ -1.4
CCDC30-214ENST00000514642 RAB32Q13637 225 aa6.33□□□□□ -1.4
CCDC30-214ENST00000514642 FAM201AQ5SY85 155 aa6.33□□□□□ -1.4
CCDC30-214ENST00000514642 MINOS1Q5TGZ0 78 aa6.33□□□□□ -1.4
CCDC30-214ENST00000514642 FBXL15Q9H469 300 aa6.33□□□□□ -1.4
CCDC30-214ENST00000514642 HSF4Q9ULV5 492 aa6.33□□□□□ -1.4
CCDC30-214ENST00000514642 MINOS1-NBL1R4GNA1 71 aa6.33□□□□□ -1.4
CCDC30-214ENST00000514642 LCTP09848 1927 aa6.33□□□□□ -1.4
CCDC30-214ENST00000514642 LYNX1G3V0Z9 82 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 M0R1W7 72 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 CDS2O95674 445 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 LYNX1P0DP58 116 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 CD1BP29016 333 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 ATP5IP56385 69 aaPredicted RBP6.32□□□□□ -1.4
CCDC30-214ENST00000514642 ZNF154Q13106 437 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 PRR30Q53SZ7 412 aaPredicted RBP6.32□□□□□ -1.4
CCDC30-214ENST00000514642 NXF2Q9GZY0 626 aaKnown RBP6.32□□□□□ -1.4
CCDC30-214ENST00000514642 ZDHHC11Q9H8X9 412 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 CHD5Q8TDI0 1954 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 LOC102723971A0A1B0GUV8 181 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 NAT1P18440 290 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 RPS20P60866 119 aaKnown RBP6.32□□□□□ -1.4
CCDC30-214ENST00000514642 IGSF11Q5DX21 431 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 CLEC18BQ6UXF7 455 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 C11orf42Q8N5U0 333 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 C11orf44Q8N8P7 122 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 KCNE5Q9UJ90 142 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 TSTD3H0UI37 97 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 CX3CL1P78423 397 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 TWIST1Q15672 202 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 TMEM101Q96IK0 257 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 WDR73Q6P4I2 378 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 FAM159AQ6UWV7 190 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 TNFRSF14Q92956 283 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 RBKSQ9H477 322 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 KLF2Q9Y5W3 355 aaPredicted RBP6.32□□□□□ -1.4
CCDC30-214ENST00000514642 SRSF10O75494 262 aaKnown RBP6.32□□□□□ -1.4
CCDC30-214ENST00000514642 MMP9P14780 707 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 GPR82Q96P67 336 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 VGLL1Q99990 258 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 NEURL2Q9BR09 285 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 TICRRQ7Z2Z1 1910 aa6.32□□□□□ -1.4
CCDC30-214ENST00000514642 PDE6DO43924 150 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 C1QL1O75973 258 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 LINC00869P0C866 280 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 GZMMP51124 257 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 EMP1P54849 157 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 PHLDA3Q9Y5J5 127 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 TRAV8-7A0A075B6U6 113 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 C17orf51A8MQB3 221 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 MPDU1O75352 247 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 DUSP14O95147 198 aaKnown RBP6.31□□□□□ -1.4
CCDC30-214ENST00000514642 MSMBP08118 114 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 PTHLHP12272 177 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 TMEM241Q24JQ0 296 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 WBP1Q96G27 269 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 WDFY2Q96P53 400 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 ZNF586Q9NXT0 402 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 KBTBD11O94819 623 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 IGKV3-20P01619 116 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 LEMD1Q68G75 181 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 TMEM167AQ8TBQ9 72 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 RHOVQ96L33 236 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 RTN4RQ9BZR6 473 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 FOXA2Q9Y261 457 aaPredicted RBP6.31□□□□□ -1.4
CCDC30-214ENST00000514642 TBL2Q9Y4P3 447 aaKnown RBP6.31□□□□□ -1.4
CCDC30-214ENST00000514642 SLC25A15Q9Y619 301 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 OOSP1A8MZH6 123 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 PGLYRP1O75594 196 aaPredicted RBP6.31□□□□□ -1.4
CCDC30-214ENST00000514642 CTF1Q16619 201 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 WDR89Q96FK6 387 aaPredicted RBP6.31□□□□□ -1.4
CCDC30-214ENST00000514642 TMEM204Q9BSN7 226 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 SRRQ9GZT4 340 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 DPH3P1Q9H4G8 78 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 FNDC1Q4ZHG4 1894 aaPredicted RBP6.31□□□□□ -1.4
CCDC30-214ENST00000514642 TCF20Q9UGU0 1960 aaKnown RBP6.31□□□□□ -1.4
CCDC30-214ENST00000514642 SCN3AQ9NY46 2000 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 IGHV3-11P01762 117 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 CD5P06127 495 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 SSTR5P35346 364 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 UQCRFS1P47985 274 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 EGR4Q05215 589 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 SOSTQ9BQB4 213 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 MRPS18AQ9NVS2 196 aaKnown RBP6.31□□□□□ -1.4
CCDC30-214ENST00000514642 PTPRFP10586 1907 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 MYO7AQ13402 2215 aa6.31□□□□□ -1.4
CCDC30-214ENST00000514642 C1QBP02746 253 aa6.3□□□□□ -1.4
CCDC30-214ENST00000514642 TGFBR1P36897 503 aa6.3□□□□□ -1.4
CCDC30-214ENST00000514642 Q71RC1 249 aaPredicted RBP6.3□□□□□ -1.4
CCDC30-214ENST00000514642 ZNF429Q86V71 674 aa6.3□□□□□ -1.4
CCDC30-214ENST00000514642 C10orf111Q8N326 155 aa6.3□□□□□ -1.4
CCDC30-214ENST00000514642 HERPUD1Q15011 391 aa6.3□□□□□ -1.4
CCDC30-214ENST00000514642 RNASEKQ6P5S7 137 aaKnown RBP6.3□□□□□ -1.4
CCDC30-214ENST00000514642 MYOZ3Q8TDC0 251 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms