RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 GPR82Q96P67 336 aa3.02□□□□□ -1.93
RFC1-216ENST00000514572 SPIN2AQ99865 258 aa3.02□□□□□ -1.93
RFC1-216ENST00000514572 SPIN2BQ9BPZ2 258 aa3.02□□□□□ -1.93
RFC1-216ENST00000514572 SLC25A31Q9H0C2 315 aa3.02□□□□□ -1.93
RFC1-216ENST00000514572 TCEAL2Q9H3H9 227 aaPredicted RBP3.02□□□□□ -1.93
RFC1-216ENST00000514572 COQ4Q9Y3A0 265 aa3.02□□□□□ -1.93
RFC1-216ENST00000514572 OR51B4Q9Y5P0 310 aa3.02□□□□□ -1.93
RFC1-216ENST00000514572 RTTNQ86VV8 2226 aa3.02□□□□□ -1.93
RFC1-216ENST00000514572 INTS1Q8N201 2190 aaKnown RBP3.01□□□□□ -1.93
RFC1-216ENST00000514572 FN1P02751 2386 aaKnown RBP3.01□□□□□ -1.93
RFC1-216ENST00000514572 IGKV2D-24A0A075B6R9 120 aa3.01□□□□□ -1.93
RFC1-216ENST00000514572 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.01□□□□□ -1.93
RFC1-216ENST00000514572 H3BP45 60 aa3.01□□□□□ -1.93
RFC1-216ENST00000514572 PHYHO14832 338 aa3.01□□□□□ -1.93
RFC1-216ENST00000514572 COX7A2P2O60397 106 aa3.01□□□□□ -1.93
RFC1-216ENST00000514572 CCL4P13236 92 aa3.01□□□□□ -1.93
RFC1-216ENST00000514572 PRTN3P24158 256 aa3.01□□□□□ -1.93
RFC1-216ENST00000514572 NPY1RP25929 384 aa3.01□□□□□ -1.93
RFC1-216ENST00000514572 ELK4P28324 431 aa3.01□□□□□ -1.93
RFC1-216ENST00000514572 IMPA1P29218 277 aa3.01□□□□□ -1.93
RFC1-216ENST00000514572 MPIP34949 423 aa3.01□□□□□ -1.93
RFC1-216ENST00000514572 UBE2IP63279 158 aaKnown RBP3.01□□□□□ -1.93
RFC1-216ENST00000514572 KRTAP21-3Q3LHN1 58 aa3.01□□□□□ -1.93
RFC1-216ENST00000514572 COX19Q49B96 90 aa3.01□□□□□ -1.93
RFC1-216ENST00000514572 BRMS1LQ5PSV4 323 aa3.01□□□□□ -1.93
RFC1-216ENST00000514572 DRAM2Q6UX65 266 aa3.01□□□□□ -1.93
RFC1-216ENST00000514572 FUNDC1Q8IVP5 155 aa3.01□□□□□ -1.93
RFC1-216ENST00000514572 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.01□□□□□ -1.93
RFC1-216ENST00000514572 PPWD1Q96BP3 646 aaKnown RBP3.01□□□□□ -1.93
RFC1-216ENST00000514572 YPEL4Q96NS1 127 aa3.01□□□□□ -1.93
RFC1-216ENST00000514572 SDHCQ99643 169 aaPredicted RBP3.01□□□□□ -1.93
RFC1-216ENST00000514572 PRSS27Q9BQR3 290 aa3.01□□□□□ -1.93
RFC1-216ENST00000514572 SLC19A3Q9BZV2 496 aa3.01□□□□□ -1.93
RFC1-216ENST00000514572 ING2Q9H160 280 aa3.01□□□□□ -1.93
RFC1-216ENST00000514572 OR51E2Q9H255 320 aa3.01□□□□□ -1.93
RFC1-216ENST00000514572 FAM60AQ9NP50 221 aa3.01□□□□□ -1.93
RFC1-216ENST00000514572 TMEM38BQ9NVV0 291 aa3.01□□□□□ -1.93
RFC1-216ENST00000514572 TAC3Q9UHF0 121 aa3.01□□□□□ -1.93
RFC1-216ENST00000514572 RWDD2AQ9UIY3 292 aa3.01□□□□□ -1.93
RFC1-216ENST00000514572 DOCK10Q96BY6 2186 aa3.01□□□□□ -1.93
RFC1-216ENST00000514572 AKAP9Q99996 3911 aa3□□□□□ -1.93
RFC1-216ENST00000514572 TRAV8-2A0A0B4J237 113 aa3□□□□□ -1.93
RFC1-216ENST00000514572 A0A0D9SEW6 157 aa3□□□□□ -1.93
RFC1-216ENST00000514572 LRCOL1A6NCL2 159 aa3□□□□□ -1.93
RFC1-216ENST00000514572 COLCA2A8K830 154 aa3□□□□□ -1.93
RFC1-216ENST00000514572 CEACAM18A8MTB9 384 aa3□□□□□ -1.93
RFC1-216ENST00000514572 FTCDNL1E5RQL4 147 aa3□□□□□ -1.93
RFC1-216ENST00000514572 F5H5K5 113 aa3□□□□□ -1.93
RFC1-216ENST00000514572 TMEM250H0YL14 139 aa3□□□□□ -1.93
RFC1-216ENST00000514572 GPR171O14626 319 aa3□□□□□ -1.93
RFC1-216ENST00000514572 KLRC4O43908 158 aa3□□□□□ -1.93
RFC1-216ENST00000514572 ENTPD6O75354 484 aa3□□□□□ -1.93
RFC1-216ENST00000514572 PSIP1O75475 530 aaKnown RBP3□□□□□ -1.93
RFC1-216ENST00000514572 WISP3O95389 354 aaPredicted RBP3□□□□□ -1.93
RFC1-216ENST00000514572 IGHV1-46P01743 117 aa3□□□□□ -1.93
RFC1-216ENST00000514572 ZNF3P17036 446 aa3□□□□□ -1.93
RFC1-216ENST00000514572 CASP1P29466 404 aa3□□□□□ -1.93
RFC1-216ENST00000514572 GNA12Q03113 381 aa3□□□□□ -1.93
RFC1-216ENST00000514572 EIF4EBP2Q13542 120 aaPredicted RBP3□□□□□ -1.93
RFC1-216ENST00000514572 MOBPQ13875 183 aa3□□□□□ -1.93
RFC1-216ENST00000514572 UBE2NLQ5JXB2 153 aa3□□□□□ -1.93
RFC1-216ENST00000514572 FAM173BQ6P4H8 233 aa3□□□□□ -1.93
RFC1-216ENST00000514572 FAM151BQ6UXP7 276 aa3□□□□□ -1.93
RFC1-216ENST00000514572 PLCZ1Q86YW0 608 aa3□□□□□ -1.93
RFC1-216ENST00000514572 C10orf107Q8IVU9 208 aa3□□□□□ -1.93
RFC1-216ENST00000514572 MUC15Q8N387 334 aa3□□□□□ -1.93
RFC1-216ENST00000514572 GATD1Q8NB37 220 aa3□□□□□ -1.93
RFC1-216ENST00000514572 OR2M3Q8NG83 312 aa3□□□□□ -1.93
RFC1-216ENST00000514572 OR2K2Q8NGT1 345 aa3□□□□□ -1.93
RFC1-216ENST00000514572 OR6K3Q8NGY3 331 aa3□□□□□ -1.93
RFC1-216ENST00000514572 RTN4IP1Q8WWV3 396 aaPredicted RBP3□□□□□ -1.93
RFC1-216ENST00000514572 FXYD5Q96DB9 178 aa3□□□□□ -1.93
RFC1-216ENST00000514572 LINC01587Q99440 93 aa3□□□□□ -1.93
RFC1-216ENST00000514572 GPR22Q99680 433 aa3□□□□□ -1.93
RFC1-216ENST00000514572 THTPAQ9BU02 230 aa3□□□□□ -1.93
RFC1-216ENST00000514572 UGT2B28Q9BY64 529 aa3□□□□□ -1.93
RFC1-216ENST00000514572 ULBP3Q9BZM4 244 aa3□□□□□ -1.93
RFC1-216ENST00000514572 MRPL40Q9NQ50 206 aaKnown RBP3□□□□□ -1.93
RFC1-216ENST00000514572 ZNF706Q9Y5V0 76 aaPredicted RBP3□□□□□ -1.93
RFC1-216ENST00000514572 ZNF106Q9H2Y7 1883 aaKnown RBP3□□□□□ -1.93
RFC1-216ENST00000514572 DNAJC13O75165 2243 aa2.99□□□□□ -1.93
RFC1-216ENST00000514572 CCDC88CQ9P219 2028 aa2.99□□□□□ -1.93
RFC1-216ENST00000514572 IGLV4-60A0A075B6I1 120 aa2.99□□□□□ -1.93
RFC1-216ENST00000514572 IGHV2-26A0A0B4J1V2 119 aa2.99□□□□□ -1.93
RFC1-216ENST00000514572 C7orf66A4D0T2 115 aa2.99□□□□□ -1.93
RFC1-216ENST00000514572 A8MUU9 505 aa2.99□□□□□ -1.93
RFC1-216ENST00000514572 C21orf140B9A014 251 aa2.99□□□□□ -1.93
RFC1-216ENST00000514572 E2F6O75461 281 aa2.99□□□□□ -1.93
RFC1-216ENST00000514572 OR5AC1P0C628 307 aa2.99□□□□□ -1.93
RFC1-216ENST00000514572 PET100P0DJ07 73 aa2.99□□□□□ -1.93
RFC1-216ENST00000514572 SPNP16150 400 aa2.99□□□□□ -1.93
RFC1-216ENST00000514572 SLC6A1P30531 599 aa2.99□□□□□ -1.93
RFC1-216ENST00000514572 TGM4P49221 684 aa2.99□□□□□ -1.93
RFC1-216ENST00000514572 ZNF235Q14590 738 aa2.99□□□□□ -1.93
RFC1-216ENST00000514572 ZCWPW2Q504Y3 356 aa2.99□□□□□ -1.93
RFC1-216ENST00000514572 FA2HQ7L5A8 372 aa2.99□□□□□ -1.93
RFC1-216ENST00000514572 MARCH3Q86UD3 253 aa2.99□□□□□ -1.93
RFC1-216ENST00000514572 DEFB106AQ8N104 65 aa2.99□□□□□ -1.93
RFC1-216ENST00000514572 TMEM156Q8N614 296 aa2.99□□□□□ -1.93
RFC1-216ENST00000514572 ZFP62Q8NB50 900 aaPredicted RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms