RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 A0A0G2JRQ6 117 aa16.04■□□□□ 0.16
SSBP2-218ENST00000514493 RNF222A6NCQ9 220 aa16.04■□□□□ 0.16
SSBP2-218ENST00000514493 TOR1AO14656 332 aa16.04■□□□□ 0.16
SSBP2-218ENST00000514493 RGS13O14921 159 aa16.04■□□□□ 0.16
SSBP2-218ENST00000514493 TSC22D2O75157 780 aa16.04■□□□□ 0.16
SSBP2-218ENST00000514493 DEDDO75618 318 aa16.04■□□□□ 0.16
SSBP2-218ENST00000514493 IGKV1-5P01602 117 aa16.04■□□□□ 0.16
SSBP2-218ENST00000514493 MMP9P14780 707 aa16.04■□□□□ 0.16
SSBP2-218ENST00000514493 DVL1P1P54792 670 aaPredicted RBP16.04■□□□□ 0.16
SSBP2-218ENST00000514493 PRB3Q04118 309 aaPredicted RBP16.04■□□□□ 0.16
SSBP2-218ENST00000514493 NCR3LG1Q68D85 454 aa16.04■□□□□ 0.16
SSBP2-218ENST00000514493 ACOT7LQ6ZUV0 252 aa16.04■□□□□ 0.16
SSBP2-218ENST00000514493 TMUB2Q71RG4 321 aa16.04■□□□□ 0.16
SSBP2-218ENST00000514493 VMO1Q7Z5L0 202 aa16.04■□□□□ 0.16
SSBP2-218ENST00000514493 FOXRED2Q8IWF2 684 aa16.04■□□□□ 0.16
SSBP2-218ENST00000514493 INO80EQ8NBZ0 244 aaPredicted RBP16.04■□□□□ 0.16
SSBP2-218ENST00000514493 RRNAD1Q96FB5 475 aaKnown RBP16.04■□□□□ 0.16
SSBP2-218ENST00000514493 ARL6Q9H0F7 186 aa16.04■□□□□ 0.16
SSBP2-218ENST00000514493 A0A0D9SG52 128 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 A0A1B0GU03 582 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 ATG12O94817 140 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 RLN2P04090 185 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 IL3RAP26951 378 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 PRRX1P54821 245 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 LINC00205P59089 165 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 ZNF816Q0VGE8 651 aaPredicted RBP16.03■□□□□ 0.16
SSBP2-218ENST00000514493 OPCMLQ14982 345 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 PNKDQ8N490 385 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 OR1S1Q8NH92 325 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 TMEM186Q96B77 213 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 GPR146Q96CH1 333 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 C1orf159Q96HA4 380 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 PRELID3BQ9Y3B1 194 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 LSM5Q9Y4Y9 91 aaKnown RBP16.03■□□□□ 0.16
SSBP2-218ENST00000514493 INSIG2Q9Y5U4 225 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 AKAP9Q99996 3911 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 K7EPK0 472 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 ST8SIA3O43173 380 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 RBFOX2O43251 390 aaKnown RBP eCLIP16.03■□□□□ 0.16
SSBP2-218ENST00000514493 S1PR2O95136 353 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 KIR2DS2P43631 304 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 THBS3P49746 956 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 AP2S1P53680 142 aaPredicted RBP16.03■□□□□ 0.16
SSBP2-218ENST00000514493 HCP5Q6MZN7 132 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 KCNRGQ8N5I3 272 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 FAM71E2Q8N5Q1 922 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 OR11H6Q8NGC7 330 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 ST6GALNAC6Q969X2 333 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 ADTRPQ96IZ2 230 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 HEXA-AS1Q9H8Q6 139 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 POMT1Q9Y6A1 747 aa16.03■□□□□ 0.16
SSBP2-218ENST00000514493 MSMBP08118 114 aa16.02■□□□□ 0.15
SSBP2-218ENST00000514493 HOXB4P17483 251 aaPredicted RBP16.02■□□□□ 0.15
SSBP2-218ENST00000514493 EPHA1P21709 976 aa16.02■□□□□ 0.15
SSBP2-218ENST00000514493 NKX2-1P43699 371 aaPredicted RBP16.02■□□□□ 0.15
SSBP2-218ENST00000514493 LOXL1Q08397 574 aaPredicted RBP16.02■□□□□ 0.15
SSBP2-218ENST00000514493 KLRD1Q13241 179 aa16.02■□□□□ 0.15
SSBP2-218ENST00000514493 OR4P4Q8NGL7 312 aa16.02■□□□□ 0.15
SSBP2-218ENST00000514493 DDB2Q92466 427 aa16.02■□□□□ 0.15
SSBP2-218ENST00000514493 AMMECR1Q9Y4X0 333 aaPredicted RBP16.02■□□□□ 0.15
SSBP2-218ENST00000514493 TEX15Q9BXT5 2789 aa16.01■□□□□ 0.15
SSBP2-218ENST00000514493 ODF3BA8MYP8 253 aa16.01■□□□□ 0.15
SSBP2-218ENST00000514493 TOX4O94842 621 aa16.01■□□□□ 0.15
SSBP2-218ENST00000514493 MMP24Q9Y5R2 645 aa16.01■□□□□ 0.15
SSBP2-218ENST00000514493 B4DSR2 109 aa16■□□□□ 0.15
SSBP2-218ENST00000514493 FCGR3BO75015 233 aa16■□□□□ 0.15
SSBP2-218ENST00000514493 PITX3O75364 302 aa16■□□□□ 0.15
SSBP2-218ENST00000514493 NUP62P37198 522 aaPredicted RBP16■□□□□ 0.15
SSBP2-218ENST00000514493 Q96MF0 132 aa16■□□□□ 0.15
SSBP2-218ENST00000514493 AQP10Q96PS8 301 aa16■□□□□ 0.15
SSBP2-218ENST00000514493 TBX15Q96SF7 602 aa16■□□□□ 0.15
SSBP2-218ENST00000514493 PCGF1Q9BSM1 259 aa16■□□□□ 0.15
SSBP2-218ENST00000514493 MRPL20Q9BYC9 149 aaKnown RBP16■□□□□ 0.15
SSBP2-218ENST00000514493 PLEKHA2Q9HB19 425 aa16■□□□□ 0.15
SSBP2-218ENST00000514493 CACNG5Q9UF02 275 aa16■□□□□ 0.15
SSBP2-218ENST00000514493 E5RGE8 158 aa16■□□□□ 0.15
SSBP2-218ENST00000514493 BUB1B-PAK6H3BSN5 160 aa16■□□□□ 0.15
SSBP2-218ENST00000514493 HPRT1P00492 218 aa16■□□□□ 0.15
SSBP2-218ENST00000514493 P0C879 139 aa16■□□□□ 0.15
SSBP2-218ENST00000514493 CT45A6P0DMU7 189 aa16■□□□□ 0.15
SSBP2-218ENST00000514493 CT45A5P0DMU8 189 aa16■□□□□ 0.15
SSBP2-218ENST00000514493 CT45A7P0DMV0 189 aa16■□□□□ 0.15
SSBP2-218ENST00000514493 PAX8Q06710 450 aa16■□□□□ 0.15
SSBP2-218ENST00000514493 ZNF383Q8NA42 475 aa16■□□□□ 0.15
SSBP2-218ENST00000514493 REG4Q9BYZ8 158 aa16■□□□□ 0.15
SSBP2-218ENST00000514493 RCL1Q9Y2P8 373 aaKnown RBP16■□□□□ 0.15
SSBP2-218ENST00000514493 NSG2Q9Y328 171 aa16■□□□□ 0.15
SSBP2-218ENST00000514493 ITPR3Q14573 2671 aa15.99■□□□□ 0.15
SSBP2-218ENST00000514493 RNF223E7ERA6 249 aa15.99■□□□□ 0.15
SSBP2-218ENST00000514493 RNASEK-C17orf49H0YIS7 233 aa15.99■□□□□ 0.15
SSBP2-218ENST00000514493 KCNAB3O43448 404 aa15.99■□□□□ 0.15
SSBP2-218ENST00000514493 KRASP01116 189 aa15.99■□□□□ 0.15
SSBP2-218ENST00000514493 ARG1P05089 322 aa15.99■□□□□ 0.15
SSBP2-218ENST00000514493 G6PCP35575 357 aa15.99■□□□□ 0.15
SSBP2-218ENST00000514493 IZUMO4Q1ZYL8 232 aa15.99■□□□□ 0.15
SSBP2-218ENST00000514493 Q6ZRM9 215 aa15.99■□□□□ 0.15
SSBP2-218ENST00000514493 OR4S2Q8NH73 311 aa15.99■□□□□ 0.15
SSBP2-218ENST00000514493 COA4Q9NYJ1 87 aa15.99■□□□□ 0.15
SSBP2-218ENST00000514493 REG1BP48304 166 aa15.98■□□□□ 0.15
SSBP2-218ENST00000514493 ID3Q02535 119 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms