RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 ANK2Q01484 3957 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 NCOA6Q14686 2063 aaPredicted RBP3.66□□□□□ -1.82
CLDND1-228ENST00000513873 MEIKINA0A087WXM9 373 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 A0A1B0GW55 424 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 DUXBA0A1W2PPF3 345 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 C9orf170A2RU37 121 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 C5orf51A6NDU8 294 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 ATP6V1G2-DDX39BF2Z307 99 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 F5H5P2 479 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 WISP2O76076 250 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 OR2H2O95918 312 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 RLN2P04090 185 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 CD55P08174 381 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 ZNF735P0CB33 412 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 DUX4L2P0CJ85 424 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 DUX4L3P0CJ86 424 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 DUX4L4P0CJ87 422 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 DUX4L5P0CJ88 424 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 DUX4L6P0CJ89 424 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 DUX4L7P0CJ90 424 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 IL2RGP31785 369 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 FCGR2CP31995 323 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 PRDX2P32119 198 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 GABRA2P47869 451 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 NPY4RP50391 375 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 ERVS71-1P61550 626 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 ERVK11-1P61568 191 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 HLA-DRB3P79483 266 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 PAX5Q02548 391 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 BSPH1Q075Z2 132 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 MSMO1Q15800 293 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 CARTPTQ16568 116 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 NDUFA5Q16718 116 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 KRTAP24-1Q3LI83 254 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 ZNF876PQ49A33 203 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 IGSF11Q5DX21 431 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 DMRTC1Q5HYR2 192 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 NCMAPQ5T1S8 102 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 DHRS7BQ6IAN0 325 aaPredicted RBP3.66□□□□□ -1.82
CLDND1-228ENST00000513873 FAAP20Q6NZ36 180 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 WDR82Q6UXN9 313 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 RBMS3Q6XE24 437 aaKnown RBP3.66□□□□□ -1.82
CLDND1-228ENST00000513873 ACP7Q6ZNF0 438 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 ZNF497Q6ZNH5 498 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 SLC36A1Q7Z2H8 476 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 TRPT1Q86TN4 253 aaKnown RBP3.66□□□□□ -1.82
CLDND1-228ENST00000513873 LGI3Q8N145 548 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 RPRMLQ8N4K4 120 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 ZNF561Q8N587 486 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 GVQW1Q8N7I0 195 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 INO80EQ8NBZ0 244 aaPredicted RBP3.66□□□□□ -1.82
CLDND1-228ENST00000513873 OR4D10Q8NGI6 311 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 GRPEL2Q8TAA5 225 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 MARCH1Q8TCQ1 289 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 FAM222BQ8WU58 562 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 LRRC29Q8WV35 223 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 MITD1Q8WV92 249 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 RDH5Q92781 318 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 TIMD4Q96H15 378 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 AKR1E2Q96JD6 320 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 WFIKKN1Q96NZ8 548 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 OR2V2Q96R30 315 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 SPIN2AQ99865 258 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 FOXC2Q99958 501 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 SPIN2BQ9BPZ2 258 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 RAB1BQ9H0U4 201 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 WDR13Q9H1Z4 485 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 ZNF665Q9H7R5 613 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 METTL8Q9H825 291 aaKnown RBP3.66□□□□□ -1.82
CLDND1-228ENST00000513873 TMEM165Q9HC07 324 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 HES4Q9HCC6 221 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 DUX4Q9UBX2 424 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 FZR1Q9UM11 496 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 GPR132Q9UNW8 380 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 PPP1R3CQ9UQK1 317 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 WIPI2Q9Y4P8 454 aa3.66□□□□□ -1.82
CLDND1-228ENST00000513873 CPAMD8Q8IZJ3 1885 aa3.65□□□□□ -1.82
CLDND1-228ENST00000513873 TRGV10A0A0A0MS01 117 aa3.65□□□□□ -1.83
CLDND1-228ENST00000513873 TRAV24A0A0B4J272 114 aa3.65□□□□□ -1.83
CLDND1-228ENST00000513873 hCG_1809904A0A1W2PP81 198 aa3.65□□□□□ -1.83
CLDND1-228ENST00000513873 A0A1W2PPE2 198 aa3.65□□□□□ -1.83
CLDND1-228ENST00000513873 A0A1W2PR64 198 aa3.65□□□□□ -1.83
CLDND1-228ENST00000513873 A0A1W2PRV1 198 aa3.65□□□□□ -1.83
CLDND1-228ENST00000513873 hADV38S2A0JD32 116 aa3.65□□□□□ -1.83
CLDND1-228ENST00000513873 DPRXA6NFQ7 191 aa3.65□□□□□ -1.83
CLDND1-228ENST00000513873 RFPL4AA6NLU0 287 aa3.65□□□□□ -1.83
CLDND1-228ENST00000513873 OR2AT4A6NND4 320 aa3.65□□□□□ -1.83
CLDND1-228ENST00000513873 SRRM5B3KS81 715 aa3.65□□□□□ -1.83
CLDND1-228ENST00000513873 RFPL4AL1F8VTS6 287 aa3.65□□□□□ -1.83
CLDND1-228ENST00000513873 SIRPB1O00241 398 aa3.65□□□□□ -1.83
CLDND1-228ENST00000513873 GPR31O00270 319 aa3.65□□□□□ -1.83
CLDND1-228ENST00000513873 SLC33A1O00400 549 aaPredicted RBP3.65□□□□□ -1.83
CLDND1-228ENST00000513873 SDCBPO00560 298 aaPredicted RBP3.65□□□□□ -1.83
CLDND1-228ENST00000513873 GOSR2O14653 212 aa3.65□□□□□ -1.83
CLDND1-228ENST00000513873 BET1O15155 118 aa3.65□□□□□ -1.83
CLDND1-228ENST00000513873 MLNRO43193 412 aa3.65□□□□□ -1.83
CLDND1-228ENST00000513873 RHBDL1O75783 438 aa3.65□□□□□ -1.83
CLDND1-228ENST00000513873 OR2A4O95047 310 aa3.65□□□□□ -1.83
CLDND1-228ENST00000513873 SFT2D2O95562 160 aa3.65□□□□□ -1.83
CLDND1-228ENST00000513873 FSTL3O95633 263 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms