RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 IMMP2LQ96T52 175 aa0.9□□□□□ -2.27
TRAPPC11-210ENST00000513600 DLG5Q8TDM6 1919 aa0.89□□□□□ -2.27
TRAPPC11-210ENST00000513600 IGHV1-18A0A0C4DH31 117 aa0.89□□□□□ -2.27
TRAPPC11-210ENST00000513600 LOC100506127A0A0U1RQW1 187 aa0.89□□□□□ -2.27
TRAPPC11-210ENST00000513600 ZNF879B4DU55 563 aa0.89□□□□□ -2.27
TRAPPC11-210ENST00000513600 M0R381 172 aa0.89□□□□□ -2.27
TRAPPC11-210ENST00000513600 DEFA4P12838 97 aa0.89□□□□□ -2.27
TRAPPC11-210ENST00000513600 CA5AP35218 305 aa0.89□□□□□ -2.27
TRAPPC11-210ENST00000513600 KCNJ3P48549 501 aa0.89□□□□□ -2.27
TRAPPC11-210ENST00000513600 TMEM33P57088 247 aa0.89□□□□□ -2.27
TRAPPC11-210ENST00000513600 TPI1P60174 286 aa0.89□□□□□ -2.27
TRAPPC11-210ENST00000513600 TMED1Q13445 227 aa0.89□□□□□ -2.27
TRAPPC11-210ENST00000513600 ELOBQ15370 118 aa0.89□□□□□ -2.27
TRAPPC11-210ENST00000513600 Q1T7F1 81 aa0.89□□□□□ -2.27
TRAPPC11-210ENST00000513600 Q3ZCU0 254 aa0.89□□□□□ -2.27
TRAPPC11-210ENST00000513600 SPERTQ8NA61 448 aa0.89□□□□□ -2.27
TRAPPC11-210ENST00000513600 ZNF675Q8TD23 568 aa0.89□□□□□ -2.27
TRAPPC11-210ENST00000513600 ASCL3Q9NQ33 180 aa0.89□□□□□ -2.27
TRAPPC11-210ENST00000513600 AGPAT3Q9NRZ7 376 aa0.89□□□□□ -2.27
TRAPPC11-210ENST00000513600 KIAA2026Q5HYC2 2103 aa0.89□□□□□ -2.27
TRAPPC11-210ENST00000513600 GOLGA8RI6L899 631 aa0.88□□□□□ -2.27
TRAPPC11-210ENST00000513600 YKT6O15498 198 aa0.88□□□□□ -2.27
TRAPPC11-210ENST00000513600 GP1BAP07359 652 aa0.88□□□□□ -2.27
TRAPPC11-210ENST00000513600 F8A1P23610 371 aa0.88□□□□□ -2.27
TRAPPC11-210ENST00000513600 PSMB8P28062 276 aa0.88□□□□□ -2.27
TRAPPC11-210ENST00000513600 HADHBP55084 474 aaKnown RBP0.88□□□□□ -2.27
TRAPPC11-210ENST00000513600 TBPL1P62380 186 aa0.88□□□□□ -2.27
TRAPPC11-210ENST00000513600 MIAQ16674 131 aa0.88□□□□□ -2.27
TRAPPC11-210ENST00000513600 ARHGAP11BQ3KRB8 267 aa0.88□□□□□ -2.27
TRAPPC11-210ENST00000513600 COPS6Q7L5N1 327 aa0.88□□□□□ -2.27
TRAPPC11-210ENST00000513600 LFNGQ8NES3 379 aa0.88□□□□□ -2.27
TRAPPC11-210ENST00000513600 RNASE6Q93091 150 aaKnown RBP0.88□□□□□ -2.27
TRAPPC11-210ENST00000513600 MS4A6EQ96DS6 147 aa0.88□□□□□ -2.27
TRAPPC11-210ENST00000513600 METTL9Q9H1A3 318 aa0.88□□□□□ -2.27
TRAPPC11-210ENST00000513600 MAP3K19Q56UN5 1328 aa0.88□□□□□ -2.27
TRAPPC11-210ENST00000513600 DAPL1A0PJW8 107 aa0.87□□□□□ -2.27
TRAPPC11-210ENST00000513600 H7C2G1 150 aa0.87□□□□□ -2.27
TRAPPC11-210ENST00000513600 K7ERQ8 282 aa0.87□□□□□ -2.27
TRAPPC11-210ENST00000513600 SYNGR1O43759 233 aa0.87□□□□□ -2.27
TRAPPC11-210ENST00000513600 H2BFSP57053 126 aa0.87□□□□□ -2.27
TRAPPC11-210ENST00000513600 TAS2R20P59543 309 aa0.87□□□□□ -2.27
TRAPPC11-210ENST00000513600 AP1S1P61966 158 aa0.87□□□□□ -2.27
TRAPPC11-210ENST00000513600 SMAGPQ0VAQ4 97 aa0.87□□□□□ -2.27
TRAPPC11-210ENST00000513600 SYCP1Q15431 976 aa0.87□□□□□ -2.27
TRAPPC11-210ENST00000513600 USF2Q15853 346 aaPredicted RBP0.87□□□□□ -2.27
TRAPPC11-210ENST00000513600 CLEC12BQ2HXU8 276 aa0.87□□□□□ -2.27
TRAPPC11-210ENST00000513600 FAM173BQ6P4H8 233 aa0.87□□□□□ -2.27
TRAPPC11-210ENST00000513600 CFAP53Q96M91 514 aa0.87□□□□□ -2.27
TRAPPC11-210ENST00000513600 PARVAQ9NVD7 372 aa0.87□□□□□ -2.27
TRAPPC11-210ENST00000513600 HDGFL3Q9Y3E1 203 aa0.87□□□□□ -2.27
TRAPPC11-210ENST00000513600 CUL9Q8IWT3 2517 aa0.86□□□□□ -2.27
TRAPPC11-210ENST00000513600 A0A087WUU8 490 aa0.86□□□□□ -2.27
TRAPPC11-210ENST00000513600 TRAV38-1A0A0B4J264 116 aa0.86□□□□□ -2.27
TRAPPC11-210ENST00000513600 GOLGA8QA0A0J9YX86 632 aa0.86□□□□□ -2.27
TRAPPC11-210ENST00000513600 METTL15A6NJ78 407 aa0.86□□□□□ -2.27
TRAPPC11-210ENST00000513600 H3BT86 120 aa0.86□□□□□ -2.27
TRAPPC11-210ENST00000513600 NEMFO60524 1076 aa0.86□□□□□ -2.27
TRAPPC11-210ENST00000513600 SCN2BO60939 215 aa0.86□□□□□ -2.27
TRAPPC11-210ENST00000513600 REG1BP48304 166 aa0.86□□□□□ -2.27
TRAPPC11-210ENST00000513600 GNA13Q14344 377 aa0.86□□□□□ -2.27
TRAPPC11-210ENST00000513600 Q8N2B8 174 aa0.86□□□□□ -2.27
TRAPPC11-210ENST00000513600 C17orf78Q8N4C9 275 aa0.86□□□□□ -2.27
TRAPPC11-210ENST00000513600 OR52A5Q9H2C5 316 aa0.86□□□□□ -2.27
TRAPPC11-210ENST00000513600 CHMP5Q9NZZ3 219 aa0.86□□□□□ -2.27
TRAPPC11-210ENST00000513600 DIDO1Q9BTC0 2240 aaKnown RBP0.85□□□□□ -2.27
TRAPPC11-210ENST00000513600 A0A0D9SEW6 157 aa0.85□□□□□ -2.27
TRAPPC11-210ENST00000513600 A0A0J9YW62 118 aa0.85□□□□□ -2.27
TRAPPC11-210ENST00000513600 TRAPPC13A5PLN9 417 aa0.85□□□□□ -2.27
TRAPPC11-210ENST00000513600 HSBP1L1C9JCN9 74 aa0.85□□□□□ -2.27
TRAPPC11-210ENST00000513600 DSCAMO60469 2012 aa0.85□□□□□ -2.27
TRAPPC11-210ENST00000513600 GRPRP30550 384 aa0.85□□□□□ -2.27
TRAPPC11-210ENST00000513600 HPCAP84074 193 aa0.85□□□□□ -2.27
TRAPPC11-210ENST00000513600 TMEM86AQ8N2M4 240 aa0.85□□□□□ -2.27
TRAPPC11-210ENST00000513600 STOML3Q8TAV4 291 aa0.85□□□□□ -2.27
TRAPPC11-210ENST00000513600 MED10Q9BTT4 135 aa0.85□□□□□ -2.27
TRAPPC11-210ENST00000513600 MROQ9BYG7 248 aa0.85□□□□□ -2.27
TRAPPC11-210ENST00000513600 RBM7Q9Y580 266 aaKnown RBP0.85□□□□□ -2.27
TRAPPC11-210ENST00000513600 ZFHX2Q9C0A1 2572 aaPredicted RBP0.85□□□□□ -2.27
TRAPPC11-210ENST00000513600 ROS1P08922 2347 aa0.84□□□□□ -2.27
TRAPPC11-210ENST00000513600 OR6C6A6NF89 314 aa0.84□□□□□ -2.27
TRAPPC11-210ENST00000513600 M0QX08 132 aa0.84□□□□□ -2.27
TRAPPC11-210ENST00000513600 NPPAP01160 153 aa0.84□□□□□ -2.27
TRAPPC11-210ENST00000513600 HLA-DQB2P05538 268 aa0.84□□□□□ -2.27
TRAPPC11-210ENST00000513600 LGALS1P09382 135 aaKnown RBP0.84□□□□□ -2.27
TRAPPC11-210ENST00000513600 LINC00614P0C842 121 aa0.84□□□□□ -2.27
TRAPPC11-210ENST00000513600 C9orf64Q5T6V5 341 aa0.84□□□□□ -2.27
TRAPPC11-210ENST00000513600 SYCE1Q8N0S2 351 aa0.84□□□□□ -2.27
TRAPPC11-210ENST00000513600 TREM1Q9NP99 234 aa0.84□□□□□ -2.27
TRAPPC11-210ENST00000513600 SNURFQ9Y675 71 aa0.84□□□□□ -2.27
TRAPPC11-210ENST00000513600 FREM1Q5H8C1 2179 aa0.84□□□□□ -2.28
TRAPPC11-210ENST00000513600 TRAV7A0A075B6U4 112 aa0.83□□□□□ -2.28
TRAPPC11-210ENST00000513600 IQCF5A8MTL0 148 aa0.83□□□□□ -2.28
TRAPPC11-210ENST00000513600 PPBPP02775 128 aa0.83□□□□□ -2.28
TRAPPC11-210ENST00000513600 ATP5G1P05496 136 aa0.83□□□□□ -2.28
TRAPPC11-210ENST00000513600 TRGC1P0CF51 173 aa0.83□□□□□ -2.28
TRAPPC11-210ENST00000513600 RPL28P46779 137 aaKnown RBP0.83□□□□□ -2.28
TRAPPC11-210ENST00000513600 EVX1P49640 407 aa0.83□□□□□ -2.28
TRAPPC11-210ENST00000513600 SNAP25P60880 206 aa0.83□□□□□ -2.28
TRAPPC11-210ENST00000513600 HIST1H4AP62805 103 aaKnown RBP0.83□□□□□ -2.28
TRAPPC11-210ENST00000513600 DNAL1Q4LDG9 190 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms