RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 ANKRD22Q5VYY1 191 aa4.9□□□□□ -1.62
TRAPPC11-209ENST00000512476 TEX261Q6UWH6 196 aa4.9□□□□□ -1.62
TRAPPC11-209ENST00000512476 TMEM179BQ7Z7N9 219 aa4.9□□□□□ -1.62
TRAPPC11-209ENST00000512476 C11orf42Q8N5U0 333 aa4.9□□□□□ -1.62
TRAPPC11-209ENST00000512476 TMEM75Q8N9X5 138 aa4.9□□□□□ -1.62
TRAPPC11-209ENST00000512476 WWC2-AS2Q96NR7 200 aa4.9□□□□□ -1.62
TRAPPC11-209ENST00000512476 NRTNQ99748 197 aa4.9□□□□□ -1.62
TRAPPC11-209ENST00000512476 SRXN1Q9BYN0 137 aa4.9□□□□□ -1.62
TRAPPC11-209ENST00000512476 OR2J1Q9GZK6 312 aa4.9□□□□□ -1.62
TRAPPC11-209ENST00000512476 VCXQ9H320 206 aa4.9□□□□□ -1.62
TRAPPC11-209ENST00000512476 HS3ST2Q9Y278 367 aa4.9□□□□□ -1.62
TRAPPC11-209ENST00000512476 PCNTO95613 3336 aa4.9□□□□□ -1.62
TRAPPC11-209ENST00000512476 SHISA9B4DS77 424 aa4.9□□□□□ -1.63
TRAPPC11-209ENST00000512476 H7BYZ3 331 aa4.9□□□□□ -1.63
TRAPPC11-209ENST00000512476 MMP23AO75900 390 aa4.9□□□□□ -1.63
TRAPPC11-209ENST00000512476 VDAC2P45880 294 aaPredicted RBP4.9□□□□□ -1.63
TRAPPC11-209ENST00000512476 FAM153CQ494X1 144 aa4.9□□□□□ -1.63
TRAPPC11-209ENST00000512476 ACP7Q6ZNF0 438 aa4.9□□□□□ -1.63
TRAPPC11-209ENST00000512476 Q6ZRU5 148 aa4.9□□□□□ -1.63
TRAPPC11-209ENST00000512476 OR10J6PQ8NGY7 276 aa4.9□□□□□ -1.63
TRAPPC11-209ENST00000512476 OR1L1Q8NH94 360 aa4.9□□□□□ -1.63
TRAPPC11-209ENST00000512476 TMEM159Q96B96 161 aa4.9□□□□□ -1.63
TRAPPC11-209ENST00000512476 PKMYT1Q99640 499 aa4.9□□□□□ -1.63
TRAPPC11-209ENST00000512476 PRSS27Q9BQR3 290 aa4.9□□□□□ -1.63
TRAPPC11-209ENST00000512476 WDR13Q9H1Z4 485 aa4.9□□□□□ -1.63
TRAPPC11-209ENST00000512476 JPT2Q9H910 190 aa4.9□□□□□ -1.63
TRAPPC11-209ENST00000512476 SIGLEC7Q9Y286 467 aa4.9□□□□□ -1.63
TRAPPC11-209ENST00000512476 PXMP4Q9Y6I8 212 aa4.9□□□□□ -1.63
TRAPPC11-209ENST00000512476 KRTAP23-1A1A580 65 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 EPOPA6NHQ4 379 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 A8MWP6 167 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 PATE3B3GLJ2 98 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 H3BQF6 201 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 NRASP01111 189 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 MT-ND4LP03901 98 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 SERPINE1P05121 402 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 MMP7P09237 267 aaPredicted RBP4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 LINC00694P0DN24 101 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 VDAC1P21796 283 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 G6PCP35575 357 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 TAS2R46P59540 309 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 RPS21P63220 83 aaKnown RBP4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 TFF2Q03403 129 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 EIF3IQ13347 325 aaKnown RBP4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 ZNF239Q16600 458 aaKnown RBP4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 Q5XG85 94 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 GLIPR1L1Q6UWM5 242 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 SLC7A6Q92536 515 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 PRAC1Q96KF2 57 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 ZNF778Q96MU6 729 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 SIGLEC12Q96PQ1 595 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 PRTFDC1Q9NRG1 225 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 TVP23BQ9NYZ1 205 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 ZNF106Q9H2Y7 1883 aaKnown RBP4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 IGKV1-8A0A0C4DH67 115 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 PMS2P2O95744 297 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 CA2P00918 260 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 FABP3P05413 133 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 CNTFRP26992 372 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 FCGR2CP31995 323 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 PRR3P79522 188 aaKnown RBP4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 LCN8Q6JVE9 175 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 GDPD1Q8N9F7 314 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 TERB2Q8NHR7 220 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 ORAOV1Q8WV07 137 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 SOSTQ9BQB4 213 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 PTGES2Q9H7Z7 377 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 GNB4Q9HAV0 340 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 GPR84Q9NQS5 396 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 KCNIP2Q9NS61 270 aa4.89□□□□□ -1.63
TRAPPC11-209ENST00000512476 CIB4A0PJX0 185 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 FAM183AA6NL82 134 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 LALBAP00709 142 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 AMBPP02760 352 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 ZSCAN5DPP0CG00 497 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 SELENOWP63302 87 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 ADIGQ0VDE8 80 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 RBMY1FQ15415 496 aaKnown RBP4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 C12orf74Q32Q52 190 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 GLYATL3Q5SZD4 288 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 RFLNAQ6ZTI6 216 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 C12orf45Q8N5I9 185 aaPredicted RBP4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 FAM71E2Q8N5Q1 922 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 TMEM229BQ8NBD8 167 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 OR9G1Q8NH87 305 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 MARCH5Q9NX47 278 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 ANAPC10Q9UM13 185 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 LTBP2Q14767 1821 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 IGLV5-52A0A0A0MRZ9 124 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 IGHV4-61A0A0C4DH41 118 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 GAGE12JA6NER3 117 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 C4orf51C9J302 202 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 D6RAR5 112 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 GAGE7O76087 117 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 IGHV4-59P01825 116 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 APOA2P02652 100 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 GAGE12FP0CL80 117 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 GAGE12GP0CL81 117 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 GAGE12IP0CL82 117 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms