RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 COA4Q9NYJ1 87 aa8.5□□□□□ -1.05
PDLIM5-217ENST00000512274 GNG12Q9UBI6 72 aa8.5□□□□□ -1.05
PDLIM5-217ENST00000512274 TRAV14DV4A0A0A6YYC5 116 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 TRAV39A0A0B4J263 110 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 A0A1B0GW55 424 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 C17orf98A8MV24 154 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 FOXH1O75593 365 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 ATG12O94817 140 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 NDUFA7O95182 113 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 OR8U9P0C7N5 309 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 DUX4L2P0CJ85 424 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 DUX4L3P0CJ86 424 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 DUX4L4P0CJ87 422 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 DUX4L5P0CJ88 424 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 DUX4L6P0CJ89 424 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 DUX4L7P0CJ90 424 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 PSMB6P28072 239 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 PPP1CCP36873 323 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 GNMTQ14749 295 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 DEFB112Q30KQ8 113 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 OXLD1Q5BKU9 147 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 NMSQ5H8A3 153 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 TMEM200BQ69YZ2 307 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 DUX4L9Q6RFH8 374 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 SLC25A48Q6ZT89 311 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 C5orf24Q7Z6I8 188 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 LY6G5BQ8NDX9 201 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 OR8B3Q8NGG8 313 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 OR8U1Q8NH10 309 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 LINC01006Q8NI28 216 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 PPP1R1CQ8WVI7 109 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 NEIL1Q96FI4 390 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 ADTRPQ96IZ2 230 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 ZNF714Q96N38 554 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 WWC2-AS2Q96NR7 200 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 OR8B2Q96RD0 313 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 PDCD10Q9BUL8 212 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 CHIAQ9BZP6 476 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 PARP12Q9H0J9 701 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 COMMD9Q9P000 198 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 DUX4Q9UBX2 424 aa8.49□□□□□ -1.05
PDLIM5-217ENST00000512274 KIAA2026Q5HYC2 2103 aa8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 FAM90A9PA6NNJ1 464 aa8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 A8MXK9 166 aa8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 OR2F2O95006 317 aa8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 SIX6O95475 246 aa8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 MPC2O95563 127 aa8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 P0C879 139 aa8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 NDUFB7P17568 137 aa8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 KIR2DS2P43631 304 aa8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 TAGLNQ01995 201 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 OR2F1Q13607 317 aa8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 AARDQ4LEZ3 155 aa8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 GGNBP1Q5YKI7 109 aa8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 PRSS54Q6PEW0 395 aa8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 LYPD2Q6UXB3 125 aa8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 C1orf122Q6ZSJ8 110 aa8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 SELENOHQ8IZQ5 122 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 PRR18Q8N4B5 295 aa8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 LHFPL5Q8TAF8 219 aa8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 ABHD14AQ9BUJ0 271 aa8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 OR2D2Q9H210 308 aa8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 SLA2Q9H6Q3 261 aa8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 METTL8Q9H825 291 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 PATZ1Q9HBE1 687 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 C19orf12Q9NSK7 152 aa8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 SDHAF2Q9NX18 166 aa8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 CACFD1Q9UGQ2 172 aa8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 INSIG2Q9Y5U4 225 aa8.48□□□□□ -1.05
PDLIM5-217ENST00000512274 TRAV40A0A0B4J280 105 aa8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 A0A0D9SG52 128 aa8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 A0A1B0GU03 582 aa8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 C5orf51A6NDU8 294 aa8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 HSD17B6O14756 317 aa8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 RAB29O14966 203 aa8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 PITX3O75364 302 aa8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 ADAP1O75689 374 aa8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 SERPINE2P07093 398 aa8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 MMP9P14780 707 aa8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 DUTP33316 252 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 PROK1P58294 105 aa8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 ZNF273Q14593 569 aa8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 IAH1Q2TAA2 248 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 ZNF585BQ52M93 769 aa8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 Q5BKY6 102 aa8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 WDR25Q64LD2 544 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 BRD3OSQ6XYD6 125 aa8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 ZNF695Q8IW36 515 aa8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 C11orf42Q8N5U0 333 aa8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 SLC35G3Q8N808 338 aa8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 ZBTB8BQ8NAP8 495 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 OR4D5Q8NGN0 318 aa8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 C5orf30Q96GV9 206 aa8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 OR10C1Q96KK4 312 aa8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 ZNF251Q9BRH9 671 aa8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 TNFSF18Q9UNG2 199 aa8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 POLR3KQ9Y2Y1 108 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 RBM7Q9Y580 266 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-217ENST00000512274 PPIAL4CA0A0B4J2A2 164 aa8.46□□□□□ -1.06
PDLIM5-217ENST00000512274 FAM90A26D6RGX4 464 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms