RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 AWAT2Q6E213 333 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 OR2T2Q6IF00 324 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 LIAT1Q6ZQX7 453 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 NUFIP2Q7Z417 695 aaKnown RBP1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 Q8IYB0 196 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 OR5M9Q8NGP3 310 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 SLC25A40Q8TBP6 338 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 MYOZ3Q8TDC0 251 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 ST8SIA4Q92187 359 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 FAM3CQ92520 227 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 PIGTQ969N2 578 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 TGIF2Q9GZN2 237 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 FAM206AQ9NX38 181 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 C5AR2Q9P296 337 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 IL19Q9UHD0 177 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 KCNK6Q9Y257 313 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 ST3GAL6Q9Y274 331 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 TRBV2A0A0J9YWF9 115 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 A0A1B0GTH9 108 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 UBE2L5PA0A1B0GUS4 154 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 TMEM262E9PQX1 116 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 SH2D1BO14796 132 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 KLF8O95600 359 aaPredicted RBP1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 NRASP01111 189 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 HOXB5P09067 269 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 HTN1P15515 57 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 MGMTP16455 207 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 SFTPDP35247 375 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 DIO1P49895 249 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 PIGPP57054 158 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 SEC11AP67812 179 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 HIST1H1AQ02539 215 aaPredicted RBP1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 RAB40BQ12829 278 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 KIR2DS3Q14952 304 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 ELAVL1Q15717 326 aaKnown RBP1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 HAGHQ16775 308 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 TMEM249Q2WGJ8 235 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 SLC25A35Q3KQZ1 300 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 IGSF11Q5DX21 431 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 CT83Q5H943 113 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 COL5A1-AS1Q5SY13 56 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 METTL11BQ5VVY1 283 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 STUMQ69YW2 141 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 FAM57BQ71RH2 274 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 DND1Q8IYX4 353 aaKnown RBP1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 CLECL1Q8IZS7 167 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 CMTM8Q8IZV2 173 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 TMEM252Q8N6L7 170 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 SLC24A4Q8NFF2 622 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 OR52N2Q8NGI0 321 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 OR52I1Q8NGK6 324 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 OR1N1Q8NGS0 311 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 OR6S1Q8NH40 331 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 KIR2DL5BQ8NHK3 375 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 PHYHIPQ92561 330 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 FAM71F1Q96KD3 344 aaPredicted RBP1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 OR5B2Q96R09 309 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 C1QTNF2Q9BXJ5 285 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 ZNF552Q9H707 407 aaPredicted RBP1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 LMAN1LQ9HAT1 526 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 PARP11Q9NR21 331 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 CDC42EP3Q9UKI2 254 aa1.4□□□□□ -2.18
TRAPPC13-211ENST00000512009 A0A0G2JLM5 398 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 TMEM82A0PJX8 343 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 ZNF503-AS2A6NEH8 195 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 PGPEP1LA6NFU8 196 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 A8MV72 311 aaPredicted RBP1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 GGTLC3B5MD39 225 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 H3BMM0 161 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 XRCC3O43542 346 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 NUPR1O60356 82 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 WDR1O75083 606 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 FOXH1O75593 365 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 CDRT1O95170 752 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 PDGFAP04085 211 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 LINC00032P0C843 101 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 SLC35E2P0CK97 266 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 CGB3P0DN86 165 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 GABRG2P18507 467 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 ZP3P21754 424 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 CCL1P22362 96 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 GRPRP30550 384 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 PPOXP50336 477 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 CCL11P51671 97 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 SNRPD3P62318 126 aaKnown RBP1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 RBX1P62877 108 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 RIGQ13278 110 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 EDDM3AQ14507 147 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 LPAL2Q16609 132 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 SLC22A6Q4U2R8 563 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 KHDC3LQ587J8 217 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 DEFB121Q5J5C9 76 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 SPANXN1Q5VSR9 72 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 WDR25Q64LD2 544 aaPredicted RBP1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 TEPPQ6URK8 271 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 PRSS42Q7Z5A4 293 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 MOGAT3Q86VF5 341 aa1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 MUC20Q8N307 709 aaPredicted RBP1.4□□□□□ -2.19
TRAPPC13-211ENST00000512009 GALNT16Q8N428 558 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms