RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 MCRIP1C9JLW8 97 aa8.68□□□□□ -1.02
RNF4-216ENST00000511859 SLC17A2O00624 439 aa8.68□□□□□ -1.02
RNF4-216ENST00000511859 SLC22A1O15245 554 aa8.68□□□□□ -1.02
RNF4-216ENST00000511859 YPEL1O60688 119 aa8.68□□□□□ -1.02
RNF4-216ENST00000511859 GABARAPO95166 117 aa8.68□□□□□ -1.02
RNF4-216ENST00000511859 HTR2CP28335 458 aa8.68□□□□□ -1.02
RNF4-216ENST00000511859 RPS19P39019 145 aaKnown RBP8.68□□□□□ -1.02
RNF4-216ENST00000511859 DYRK1AQ13627 763 aa8.68□□□□□ -1.02
RNF4-216ENST00000511859 RAB11BQ15907 218 aa8.68□□□□□ -1.02
RNF4-216ENST00000511859 DEFB114Q30KQ6 69 aa8.68□□□□□ -1.02
RNF4-216ENST00000511859 C1orf100Q5SVJ3 147 aa8.68□□□□□ -1.02
RNF4-216ENST00000511859 FAM71F2Q6NXP2 309 aa8.68□□□□□ -1.02
RNF4-216ENST00000511859 SLC16A13Q7RTY0 426 aa8.68□□□□□ -1.02
RNF4-216ENST00000511859 ZNF554Q86TJ5 538 aa8.68□□□□□ -1.02
RNF4-216ENST00000511859 GAPTQ8N292 157 aa8.68□□□□□ -1.02
RNF4-216ENST00000511859 TMEM217Q8N7C4 229 aa8.68□□□□□ -1.02
RNF4-216ENST00000511859 OR5T1Q8NG75 326 aa8.68□□□□□ -1.02
RNF4-216ENST00000511859 OR4K15Q8NH41 348 aa8.68□□□□□ -1.02
RNF4-216ENST00000511859 PHLDA1Q8WV24 401 aaPredicted RBP8.68□□□□□ -1.02
RNF4-216ENST00000511859 YPEL2Q96QA6 119 aa8.68□□□□□ -1.02
RNF4-216ENST00000511859 JPT1Q9UK76 154 aa8.68□□□□□ -1.02
RNF4-216ENST00000511859 ADAM30Q9UKF2 790 aa8.68□□□□□ -1.02
RNF4-216ENST00000511859 NOL3O60936 208 aaKnown RBP8.67□□□□□ -1.02
RNF4-216ENST00000511859 ZNF780AO75290 641 aaPredicted RBP8.67□□□□□ -1.02
RNF4-216ENST00000511859 CA11O75493 328 aa8.67□□□□□ -1.02
RNF4-216ENST00000511859 CRTAPO75718 401 aaPredicted RBP8.67□□□□□ -1.02
RNF4-216ENST00000511859 RCC1P18754 421 aaPredicted RBP8.67□□□□□ -1.02
RNF4-216ENST00000511859 KIR2DS2P43631 304 aa8.67□□□□□ -1.02
RNF4-216ENST00000511859 OR3A3P47888 321 aa8.67□□□□□ -1.02
RNF4-216ENST00000511859 HTD2P86397 168 aa8.67□□□□□ -1.02
RNF4-216ENST00000511859 SPCS2Q15005 226 aa8.67□□□□□ -1.02
RNF4-216ENST00000511859 GUCA2BQ16661 112 aa8.67□□□□□ -1.02
RNF4-216ENST00000511859 IDNKQ5T6J7 187 aa8.67□□□□□ -1.02
RNF4-216ENST00000511859 FAM131AQ6UXB0 335 aa8.67□□□□□ -1.02
RNF4-216ENST00000511859 TPRA1Q86W33 373 aa8.67□□□□□ -1.02
RNF4-216ENST00000511859 CDH26Q8IXH8 852 aa8.67□□□□□ -1.02
RNF4-216ENST00000511859 OR6M1Q8NGM8 313 aa8.67□□□□□ -1.02
RNF4-216ENST00000511859 CLCC1Q96S66 551 aa8.67□□□□□ -1.02
RNF4-216ENST00000511859 UQCC2Q9BRT2 126 aa8.67□□□□□ -1.02
RNF4-216ENST00000511859 TAF9BQ9HBM6 251 aa8.67□□□□□ -1.02
RNF4-216ENST00000511859 TECRQ9NZ01 308 aaKnown RBP8.67□□□□□ -1.02
RNF4-216ENST00000511859 KCNIP1Q9NZI2 227 aa8.67□□□□□ -1.02
RNF4-216ENST00000511859 PIPOXQ9P0Z9 390 aa8.67□□□□□ -1.02
RNF4-216ENST00000511859 STEAP1Q9UHE8 339 aa8.67□□□□□ -1.02
RNF4-216ENST00000511859 DAPK2Q9UIK4 370 aa8.67□□□□□ -1.02
RNF4-216ENST00000511859 SAA2-SAA4A0A096LPE2 208 aa8.66□□□□□ -1.02
RNF4-216ENST00000511859 DPPA5A6NC42 116 aa8.66□□□□□ -1.02
RNF4-216ENST00000511859 IFITM5A6NNB3 132 aa8.66□□□□□ -1.02
RNF4-216ENST00000511859 NOTOA8MTQ0 251 aa8.66□□□□□ -1.02
RNF4-216ENST00000511859 SPRY2O43597 315 aa8.66□□□□□ -1.02
RNF4-216ENST00000511859 CA2P00918 260 aa8.66□□□□□ -1.02
RNF4-216ENST00000511859 TRBV12-3P01733 135 aa8.66□□□□□ -1.02
RNF4-216ENST00000511859 SAA2P0DJI9 122 aaPredicted RBP8.66□□□□□ -1.02
RNF4-216ENST00000511859 CT45A6P0DMU7 189 aa8.66□□□□□ -1.02
RNF4-216ENST00000511859 CT45A5P0DMU8 189 aa8.66□□□□□ -1.02
RNF4-216ENST00000511859 CT45A7P0DMV0 189 aa8.66□□□□□ -1.02
RNF4-216ENST00000511859 PSMD7P51665 324 aa8.66□□□□□ -1.02
RNF4-216ENST00000511859 TMBIM6P55061 237 aa8.66□□□□□ -1.02
RNF4-216ENST00000511859 PLA2G7Q13093 441 aa8.66□□□□□ -1.02
RNF4-216ENST00000511859 FXYD3Q14802 87 aa8.66□□□□□ -1.02
RNF4-216ENST00000511859 SFXN4Q6P4A7 337 aa8.66□□□□□ -1.02
RNF4-216ENST00000511859 Q6ZWC4 215 aa8.66□□□□□ -1.02
RNF4-216ENST00000511859 BVESQ8NE79 360 aa8.66□□□□□ -1.02
RNF4-216ENST00000511859 OR2AK2Q8NG84 335 aa8.66□□□□□ -1.02
RNF4-216ENST00000511859 OR52L2PQ8NGH6 319 aa8.66□□□□□ -1.02
RNF4-216ENST00000511859 DYNLRB2Q8TF09 96 aa8.66□□□□□ -1.02
RNF4-216ENST00000511859 FAM3DQ96BQ1 224 aa8.66□□□□□ -1.02
RNF4-216ENST00000511859 TINAGL1Q9GZM7 467 aaPredicted RBP8.66□□□□□ -1.02
RNF4-216ENST00000511859 DCSTAMPQ9H295 470 aa8.66□□□□□ -1.02
RNF4-216ENST00000511859 ZC4H2Q9NQZ6 224 aa8.66□□□□□ -1.02
RNF4-216ENST00000511859 METTL1Q9UBP6 276 aaKnown RBP8.66□□□□□ -1.02
RNF4-216ENST00000511859 DNAH17Q9UFH2 4485 aa8.66□□□□□ -1.02
RNF4-216ENST00000511859 H3BMQ9 156 aa8.65□□□□□ -1.02
RNF4-216ENST00000511859 H7C2Y5 167 aa8.65□□□□□ -1.02
RNF4-216ENST00000511859 RAB29O14966 203 aa8.65□□□□□ -1.02
RNF4-216ENST00000511859 CD37P11049 281 aa8.65□□□□□ -1.02
RNF4-216ENST00000511859 GTF2F2P13984 249 aa8.65□□□□□ -1.02
RNF4-216ENST00000511859 MGMTP16455 207 aa8.65□□□□□ -1.02
RNF4-216ENST00000511859 PPP1CCP36873 323 aaKnown RBP8.65□□□□□ -1.02
RNF4-216ENST00000511859 LGALS7P47929 136 aa8.65□□□□□ -1.02
RNF4-216ENST00000511859 TCTAP57738 103 aa8.65□□□□□ -1.02
RNF4-216ENST00000511859 GPR176Q14439 515 aa8.65□□□□□ -1.02
RNF4-216ENST00000511859 PSG5Q15238 335 aa8.65□□□□□ -1.02
RNF4-216ENST00000511859 C2orf76Q3KRA6 126 aa8.65□□□□□ -1.02
RNF4-216ENST00000511859 OR5AN1Q8NGI8 311 aa8.65□□□□□ -1.02
RNF4-216ENST00000511859 RAB2BQ8WUD1 216 aa8.65□□□□□ -1.02
RNF4-216ENST00000511859 GALMQ96C23 342 aa8.65□□□□□ -1.02
RNF4-216ENST00000511859 CYYR1Q96J86 154 aa8.65□□□□□ -1.02
RNF4-216ENST00000511859 SELENOIQ9C0D9 397 aa8.65□□□□□ -1.02
RNF4-216ENST00000511859 RBM38Q9H0Z9 239 aaKnown RBP8.65□□□□□ -1.02
RNF4-216ENST00000511859 MBNL3Q9NUK0 354 aaKnown RBP8.65□□□□□ -1.02
RNF4-216ENST00000511859 WASHC3Q9Y3C0 194 aa8.65□□□□□ -1.02
RNF4-216ENST00000511859 TMEM272A0A1B0GTI8 110 aa8.64□□□□□ -1.03
RNF4-216ENST00000511859 MSGN1A6NI15 193 aa8.64□□□□□ -1.03
RNF4-216ENST00000511859 H0YJW9 148 aa8.64□□□□□ -1.03
RNF4-216ENST00000511859 SPDEFO95238 335 aa8.64□□□□□ -1.03
RNF4-216ENST00000511859 BPNT1O95861 308 aa8.64□□□□□ -1.03
RNF4-216ENST00000511859 UBBP0CG47 229 aa8.64□□□□□ -1.03
RNF4-216ENST00000511859 PRR20EP86478 221 aa8.64□□□□□ -1.03
RNF4-216ENST00000511859 PRR20CP86479 221 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms