RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 BRWD1-AS2P59051 145 aa12.57□□□□□ -0.4
PDLIM5-216ENST00000511767 FXYD3Q14802 87 aa12.57□□□□□ -0.4
PDLIM5-216ENST00000511767 GPR107Q5VW38 600 aa12.57□□□□□ -0.4
PDLIM5-216ENST00000511767 GIMAP1Q8WWP7 306 aa12.57□□□□□ -0.4
PDLIM5-216ENST00000511767 SNAPC3Q92966 411 aa12.57□□□□□ -0.4
PDLIM5-216ENST00000511767 UBE2E2Q96LR5 201 aa12.57□□□□□ -0.4
PDLIM5-216ENST00000511767 DUX3Q96PT4 197 aa12.57□□□□□ -0.4
PDLIM5-216ENST00000511767 MRPS26Q9BYN8 205 aaKnown RBP12.57□□□□□ -0.4
PDLIM5-216ENST00000511767 TPSG1Q9NRR2 321 aa12.57□□□□□ -0.4
PDLIM5-216ENST00000511767 SHOXO15266 292 aa12.56□□□□□ -0.4
PDLIM5-216ENST00000511767 GABARAPO95166 117 aa12.56□□□□□ -0.4
PDLIM5-216ENST00000511767 CA2P00918 260 aa12.56□□□□□ -0.4
PDLIM5-216ENST00000511767 APOA1P02647 267 aa12.56□□□□□ -0.4
PDLIM5-216ENST00000511767 EIF4EP06730 217 aaKnown RBP12.56□□□□□ -0.4
PDLIM5-216ENST00000511767 NAT1P18440 290 aa12.56□□□□□ -0.4
PDLIM5-216ENST00000511767 AADACP22760 399 aa12.56□□□□□ -0.4
PDLIM5-216ENST00000511767 TAS2R20P59543 309 aa12.56□□□□□ -0.4
PDLIM5-216ENST00000511767 RTL8BQ17RB0 113 aa12.56□□□□□ -0.4
PDLIM5-216ENST00000511767 TMEM65Q6PI78 240 aa12.56□□□□□ -0.4
PDLIM5-216ENST00000511767 DHRS11Q6UWP2 260 aa12.56□□□□□ -0.4
PDLIM5-216ENST00000511767 LYSMD2Q8IV50 215 aa12.56□□□□□ -0.4
PDLIM5-216ENST00000511767 TEX45Q8NA69 505 aa12.56□□□□□ -0.4
PDLIM5-216ENST00000511767 LFNGQ8NES3 379 aa12.56□□□□□ -0.4
PDLIM5-216ENST00000511767 OR5AP2Q8NGF4 316 aa12.56□□□□□ -0.4
PDLIM5-216ENST00000511767 ACOT12Q8WYK0 555 aa12.56□□□□□ -0.4
PDLIM5-216ENST00000511767 RCC1LQ96I51 464 aaKnown RBP12.56□□□□□ -0.4
PDLIM5-216ENST00000511767 FAM103A1Q9BTL3 118 aaKnown RBP12.56□□□□□ -0.4
PDLIM5-216ENST00000511767 ANAPC10Q9UM13 185 aa12.56□□□□□ -0.4
PDLIM5-216ENST00000511767 DNAH3Q8TD57 4116 aa12.56□□□□□ -0.4
PDLIM5-216ENST00000511767 MEIS3P1A6NDR6 274 aa12.55□□□□□ -0.4
PDLIM5-216ENST00000511767 PRB2P02812 416 aaPredicted RBP12.55□□□□□ -0.4
PDLIM5-216ENST00000511767 PRSS3P35030 304 aa12.55□□□□□ -0.4
PDLIM5-216ENST00000511767 ARPC4P59998 168 aa12.55□□□□□ -0.4
PDLIM5-216ENST00000511767 TMEM69Q5SWH9 247 aa12.55□□□□□ -0.4
PDLIM5-216ENST00000511767 FOXB2Q5VYV0 432 aa12.55□□□□□ -0.4
PDLIM5-216ENST00000511767 MFSD4AQ8N468 514 aa12.55□□□□□ -0.4
PDLIM5-216ENST00000511767 TCTEX1D1Q8N7M0 179 aa12.55□□□□□ -0.4
PDLIM5-216ENST00000511767 OSR1Q8TAX0 266 aaPredicted RBP12.55□□□□□ -0.4
PDLIM5-216ENST00000511767 CCL28Q9NRJ3 127 aa12.55□□□□□ -0.4
PDLIM5-216ENST00000511767 NECAP2Q9NVZ3 263 aa12.55□□□□□ -0.4
PDLIM5-216ENST00000511767 VSIG4Q9Y279 399 aa12.55□□□□□ -0.4
PDLIM5-216ENST00000511767 A3GALT2U3KPV4 340 aa12.55□□□□□ -0.4
PDLIM5-216ENST00000511767 PRKDCP78527 4128 aaKnown RBP12.55□□□□□ -0.4
PDLIM5-216ENST00000511767 SMIM31A0A1B0GVY4 71 aa12.54□□□□□ -0.4
PDLIM5-216ENST00000511767 I3L521 148 aa12.54□□□□□ -0.4
PDLIM5-216ENST00000511767 DUS4LO95620 317 aaKnown RBP12.54□□□□□ -0.4
PDLIM5-216ENST00000511767 CRYZL1O95825 349 aa12.54□□□□□ -0.4
PDLIM5-216ENST00000511767 ELK1P19419 428 aa12.54□□□□□ -0.4
PDLIM5-216ENST00000511767 UBE2KP61086 200 aa12.54□□□□□ -0.4
PDLIM5-216ENST00000511767 RUNX1Q01196 453 aa12.54□□□□□ -0.4
PDLIM5-216ENST00000511767 MSMO1Q15800 293 aa12.54□□□□□ -0.4
PDLIM5-216ENST00000511767 ECSCRQ19T08 205 aa12.54□□□□□ -0.4
PDLIM5-216ENST00000511767 DEFB136Q30KP8 78 aa12.54□□□□□ -0.4
PDLIM5-216ENST00000511767 ACTBL2Q562R1 376 aa12.54□□□□□ -0.4
PDLIM5-216ENST00000511767 UNQ5815/PRO19632Q6UWF5 114 aa12.54□□□□□ -0.4
PDLIM5-216ENST00000511767 OVCH2Q7RTZ1 564 aa12.54□□□□□ -0.4
PDLIM5-216ENST00000511767 GPX8Q8TED1 209 aa12.54□□□□□ -0.4
PDLIM5-216ENST00000511767 HARBI1Q96MB7 349 aa12.54□□□□□ -0.4
PDLIM5-216ENST00000511767 HSD17B10Q99714 261 aaKnown RBP12.54□□□□□ -0.4
PDLIM5-216ENST00000511767 GNB4Q9HAV0 340 aa12.54□□□□□ -0.4
PDLIM5-216ENST00000511767 FOXA2Q9Y261 457 aaPredicted RBP12.54□□□□□ -0.4
PDLIM5-216ENST00000511767 MRPS7Q9Y2R9 242 aaKnown RBP12.54□□□□□ -0.4
PDLIM5-216ENST00000511767 A0A1W2PN81 502 aa12.53□□□□□ -0.4
PDLIM5-216ENST00000511767 HPGDSO60760 199 aa12.53□□□□□ -0.4
PDLIM5-216ENST00000511767 FCGR3BO75015 233 aa12.53□□□□□ -0.4
PDLIM5-216ENST00000511767 CNIH1O95406 144 aa12.53□□□□□ -0.4
PDLIM5-216ENST00000511767 PPYP01298 95 aa12.53□□□□□ -0.4
PDLIM5-216ENST00000511767 ZNF182P17025 639 aaPredicted RBP12.53□□□□□ -0.4
PDLIM5-216ENST00000511767 CHRNA7P36544 502 aa12.53□□□□□ -0.4
PDLIM5-216ENST00000511767 RFX2P48378 723 aa12.53□□□□□ -0.4
PDLIM5-216ENST00000511767 CBX3Q13185 183 aa12.53□□□□□ -0.4
PDLIM5-216ENST00000511767 CDK10Q15131 360 aa12.53□□□□□ -0.4
PDLIM5-216ENST00000511767 PRSS8Q16651 343 aa12.53□□□□□ -0.4
PDLIM5-216ENST00000511767 ZNF66Q6ZN08 573 aa12.53□□□□□ -0.4
PDLIM5-216ENST00000511767 GPR141Q7Z602 305 aa12.53□□□□□ -0.4
PDLIM5-216ENST00000511767 ZBTB34Q8NCN2 500 aa12.53□□□□□ -0.4
PDLIM5-216ENST00000511767 OR11H1Q8NG94 326 aa12.53□□□□□ -0.4
PDLIM5-216ENST00000511767 OR5M8Q8NGP6 311 aa12.53□□□□□ -0.4
PDLIM5-216ENST00000511767 ABHD5Q8WTS1 349 aa12.53□□□□□ -0.4
PDLIM5-216ENST00000511767 CASTOR1Q8WTX7 329 aa12.53□□□□□ -0.4
PDLIM5-216ENST00000511767 C4orf3Q8WVX3 66 aa12.53□□□□□ -0.4
PDLIM5-216ENST00000511767 ARPC1AQ92747 370 aa12.53□□□□□ -0.4
PDLIM5-216ENST00000511767 GPHA2Q96T91 129 aa12.53□□□□□ -0.4
PDLIM5-216ENST00000511767 PRELID3BQ9Y3B1 194 aa12.53□□□□□ -0.4
PDLIM5-216ENST00000511767 KRTAP10-11P60412 298 aa12.52□□□□□ -0.41
PDLIM5-216ENST00000511767 DYRK1AQ13627 763 aa12.52□□□□□ -0.41
PDLIM5-216ENST00000511767 ASPHD1Q5U4P2 390 aa12.52□□□□□ -0.41
PDLIM5-216ENST00000511767 OR5T1Q8NG75 326 aa12.52□□□□□ -0.41
PDLIM5-216ENST00000511767 OR1N2Q8NGR9 330 aa12.52□□□□□ -0.41
PDLIM5-216ENST00000511767 SECTM1Q8WVN6 248 aa12.52□□□□□ -0.41
PDLIM5-216ENST00000511767 RHOVQ96L33 236 aa12.52□□□□□ -0.41
PDLIM5-216ENST00000511767 DCUN1D5Q9BTE7 237 aa12.52□□□□□ -0.41
PDLIM5-216ENST00000511767 SLC5A7Q9GZV3 580 aa12.52□□□□□ -0.41
PDLIM5-216ENST00000511767 TAS2R8Q9NYW2 309 aa12.52□□□□□ -0.41
PDLIM5-216ENST00000511767 MSGN1A6NI15 193 aa12.51□□□□□ -0.41
PDLIM5-216ENST00000511767 PMP2P02689 132 aa12.51□□□□□ -0.41
PDLIM5-216ENST00000511767 GNRHRP30968 328 aa12.51□□□□□ -0.41
PDLIM5-216ENST00000511767 FHL3Q13643 280 aa12.51□□□□□ -0.41
PDLIM5-216ENST00000511767 VMA21Q3ZAQ7 101 aa12.51□□□□□ -0.41
PDLIM5-216ENST00000511767 MZT2AQ6P582 158 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms