RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 NCKAP5O14513 1909 aa1.24□□□□□ -2.21
CHD1-207ENST00000511628 ICE1Q9Y2F5 2266 aa1.23□□□□□ -2.21
CHD1-207ENST00000511628 DICER1Q9UPY3 1922 aaKnown RBP1.23□□□□□ -2.21
CHD1-207ENST00000511628 GBF1Q92538 1859 aa1.23□□□□□ -2.21
CHD1-207ENST00000511628 A0A087WUU8 490 aa1.23□□□□□ -2.21
CHD1-207ENST00000511628 A0A1W2PQL4 384 aaPredicted RBP1.23□□□□□ -2.21
CHD1-207ENST00000511628 GRIFINA4D1Z8 144 aa1.23□□□□□ -2.21
CHD1-207ENST00000511628 J3QKU1 62 aa1.23□□□□□ -2.21
CHD1-207ENST00000511628 UBFD1O14562 309 aaKnown RBP1.23□□□□□ -2.21
CHD1-207ENST00000511628 UBE2L6O14933 153 aa1.23□□□□□ -2.21
CHD1-207ENST00000511628 IL3P08700 152 aa1.23□□□□□ -2.21
CHD1-207ENST00000511628 XCL1P47992 114 aa1.23□□□□□ -2.21
CHD1-207ENST00000511628 ZNF140P52738 457 aaPredicted RBP1.23□□□□□ -2.21
CHD1-207ENST00000511628 RBM11P57052 281 aaKnown RBP1.23□□□□□ -2.21
CHD1-207ENST00000511628 RSU1Q15404 277 aa1.23□□□□□ -2.21
CHD1-207ENST00000511628 N4BP2L1Q5TBK1 243 aaPredicted RBP1.23□□□□□ -2.21
CHD1-207ENST00000511628 C1orf195Q5TG92 126 aa1.23□□□□□ -2.21
CHD1-207ENST00000511628 SBSNQ6UWP8 590 aa1.23□□□□□ -2.21
CHD1-207ENST00000511628 GLT6D1Q7Z4J2 308 aa1.23□□□□□ -2.21
CHD1-207ENST00000511628 UBL4BQ8N7F7 174 aa1.23□□□□□ -2.21
CHD1-207ENST00000511628 CLDND2Q8NHS1 167 aa1.23□□□□□ -2.21
CHD1-207ENST00000511628 RNASE11Q8TAA1 199 aaKnown RBP1.23□□□□□ -2.21
CHD1-207ENST00000511628 RAB2BQ8WUD1 216 aa1.23□□□□□ -2.21
CHD1-207ENST00000511628 NMNAT3Q96T66 252 aa1.23□□□□□ -2.21
CHD1-207ENST00000511628 TXNDC17Q9BRA2 123 aa1.23□□□□□ -2.21
CHD1-207ENST00000511628 CXCL16Q9H2A7 254 aa1.23□□□□□ -2.21
CHD1-207ENST00000511628 HES4Q9HCC6 221 aa1.23□□□□□ -2.21
CHD1-207ENST00000511628 HRASLSQ9HDD0 168 aa1.23□□□□□ -2.21
CHD1-207ENST00000511628 POLR1DQ9Y2S0 133 aa1.23□□□□□ -2.21
CHD1-207ENST00000511628 KLK5Q9Y337 293 aaPredicted RBP1.23□□□□□ -2.21
CHD1-207ENST00000511628 ABCC11Q96J66 1382 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 COL11A1P12107 1806 aaPredicted RBP1.22□□□□□ -2.21
CHD1-207ENST00000511628 STRCP1A6NGW2 1772 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 A0A1W2PQD3 144 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 C9JCJ5 164 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 COX7A2LO14548 114 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 OVOL1O14753 267 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 APOMO95445 188 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 OCM2P0CE71 109 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 GABRA2P47869 451 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 TAS2R30P59541 319 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 KRTAP13-4Q3LI77 160 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 OR10K2Q6IF99 312 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 AGTRAPQ6RW13 159 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 LRRN1Q6UXK5 716 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 RASSF6Q6ZTQ3 369 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 UMODL1-AS1Q8N2C9 162 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 SLC35F6Q8N357 371 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 GPR32P1Q8NGA4 272 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 OR2T27Q8NH04 317 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 PIGXQ8TBF5 258 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 RAB8BQ92930 207 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 SLC35G5Q96KT7 338 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 KLF6Q99612 283 aaPredicted RBP1.22□□□□□ -2.21
CHD1-207ENST00000511628 CCL13Q99616 98 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 Q9BRP9 147 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 XPNPEP1Q9NQW7 623 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 FGFR1OP2Q9NVK5 253 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 USE1Q9NZ43 259 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 ANAPC10Q9UM13 185 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 FAM215AQ9Y5M1 114 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 MUC6Q6W4X9 2439 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 SIPA1L1O43166 1804 aa1.22□□□□□ -2.21
CHD1-207ENST00000511628 ABCC12Q96J65 1359 aa1.21□□□□□ -2.21
CHD1-207ENST00000511628 BAHCC1Q9P281 2608 aa1.21□□□□□ -2.22
CHD1-207ENST00000511628 REREQ9P2R6 1566 aa1.21□□□□□ -2.22
CHD1-207ENST00000511628 COL5A3P25940 1745 aaPredicted RBP1.21□□□□□ -2.22
CHD1-207ENST00000511628 TMEM235A6NFC5 223 aa1.21□□□□□ -2.22
CHD1-207ENST00000511628 LRRN3E7EW58 273 aa1.21□□□□□ -2.22
CHD1-207ENST00000511628 LY6LH3BQJ8 138 aa1.21□□□□□ -2.22
CHD1-207ENST00000511628 H3BRN7 92 aa1.21□□□□□ -2.22
CHD1-207ENST00000511628 SLC16A4O15374 487 aa1.21□□□□□ -2.22
CHD1-207ENST00000511628 NIPSNAP2O75323 286 aa1.21□□□□□ -2.22
CHD1-207ENST00000511628 NDUFB2O95178 105 aa1.21□□□□□ -2.22
CHD1-207ENST00000511628 PEBP1P30086 187 aaKnown RBP1.21□□□□□ -2.22
CHD1-207ENST00000511628 MAP2K4P45985 399 aa1.21□□□□□ -2.22
CHD1-207ENST00000511628 TBPL1P62380 186 aa1.21□□□□□ -2.22
CHD1-207ENST00000511628 BTN3A2P78410 334 aa1.21□□□□□ -2.22
CHD1-207ENST00000511628 PRDX4Q13162 271 aa1.21□□□□□ -2.22
CHD1-207ENST00000511628 PLPPR5Q32ZL2 321 aa1.21□□□□□ -2.22
CHD1-207ENST00000511628 ZNF550Q7Z398 422 aa1.21□□□□□ -2.22
CHD1-207ENST00000511628 OR4X1Q8NH49 305 aa1.21□□□□□ -2.22
CHD1-207ENST00000511628 SGMS2Q8NHU3 365 aa1.21□□□□□ -2.22
CHD1-207ENST00000511628 SMCR5Q8TEV8 140 aa1.21□□□□□ -2.22
CHD1-207ENST00000511628 TESCQ96BS2 214 aa1.21□□□□□ -2.22
CHD1-207ENST00000511628 C12orf43Q96C57 262 aaKnown RBP1.21□□□□□ -2.22
CHD1-207ENST00000511628 GNPNAT1Q96EK6 184 aaPredicted RBP1.21□□□□□ -2.22
CHD1-207ENST00000511628 MIEN1Q9BRT3 115 aa1.21□□□□□ -2.22
CHD1-207ENST00000511628 CXorf21Q9HAI6 301 aa1.21□□□□□ -2.22
CHD1-207ENST00000511628 TMEM106BQ9NUM4 274 aa1.21□□□□□ -2.22
CHD1-207ENST00000511628 PRO2289Q9P1D8 64 aa1.21□□□□□ -2.22
CHD1-207ENST00000511628 AMMECR1Q9Y4X0 333 aaPredicted RBP1.21□□□□□ -2.22
CHD1-207ENST00000511628 RBM7Q9Y580 266 aaKnown RBP1.21□□□□□ -2.22
CHD1-207ENST00000511628 EVC2Q86UK5 1308 aa1.2□□□□□ -2.22
CHD1-207ENST00000511628 CACNA1GO43497 2377 aa1.2□□□□□ -2.22
CHD1-207ENST00000511628 TGOLN2O43493 480 aa1.2□□□□□ -2.22
CHD1-207ENST00000511628 BPGMP07738 259 aa1.2□□□□□ -2.22
CHD1-207ENST00000511628 DDTP30046 118 aa1.2□□□□□ -2.22
CHD1-207ENST00000511628 TNFAIP6P98066 277 aaPredicted RBP1.2□□□□□ -2.22
CHD1-207ENST00000511628 HOXC5Q00444 222 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms