RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 DUSP2Q05923 314 aa4.25□□□□□ -1.73
PTPN13-209ENST00000511467 TMEM92Q6UXU6 159 aa4.25□□□□□ -1.73
PTPN13-209ENST00000511467 OVCH2Q7RTZ1 564 aa4.25□□□□□ -1.73
PTPN13-209ENST00000511467 BCDIN3DQ7Z5W3 292 aaKnown RBP4.25□□□□□ -1.73
PTPN13-209ENST00000511467 ADAD2Q8NCV1 583 aaKnown RBP4.25□□□□□ -1.73
PTPN13-209ENST00000511467 Q96M66 194 aa4.25□□□□□ -1.73
PTPN13-209ENST00000511467 KIR2DL4Q99706 377 aa4.25□□□□□ -1.73
PTPN13-209ENST00000511467 SPXQ9BT56 116 aa4.25□□□□□ -1.73
PTPN13-209ENST00000511467 PEF1Q9UBV8 284 aaKnown RBP4.25□□□□□ -1.73
PTPN13-209ENST00000511467 GAB2Q9UQC2 676 aa4.25□□□□□ -1.73
PTPN13-209ENST00000511467 PUS1Q9Y606 427 aaKnown RBP eCLIP4.25□□□□□ -1.73
PTPN13-209ENST00000511467 SPTBN4Q9H254 2564 aa4.25□□□□□ -1.73
PTPN13-209ENST00000511467 H3BUA1 57 aa4.25□□□□□ -1.73
PTPN13-209ENST00000511467 CCL21O00585 134 aa4.25□□□□□ -1.73
PTPN13-209ENST00000511467 IGHV2-70P01814 119 aa4.25□□□□□ -1.73
PTPN13-209ENST00000511467 RPL27AP46776 148 aaKnown RBP4.25□□□□□ -1.73
PTPN13-209ENST00000511467 ERVK11-1P61568 191 aa4.25□□□□□ -1.73
PTPN13-209ENST00000511467 ZFP36L1Q07352 338 aaKnown RBP4.25□□□□□ -1.73
PTPN13-209ENST00000511467 FOXB2Q5VYV0 432 aa4.25□□□□□ -1.73
PTPN13-209ENST00000511467 SH2D6Q7Z4S9 175 aa4.25□□□□□ -1.73
PTPN13-209ENST00000511467 REPIN1Q9BWE0 567 aaKnown RBP4.25□□□□□ -1.73
PTPN13-209ENST00000511467 CBLN4Q9NTU7 201 aa4.25□□□□□ -1.73
PTPN13-209ENST00000511467 IDI2-AS1Q9NZ38 188 aa4.25□□□□□ -1.73
PTPN13-209ENST00000511467 MOB4Q9Y3A3 225 aa4.25□□□□□ -1.73
PTPN13-209ENST00000511467 F8P00451 2351 aa4.25□□□□□ -1.73
PTPN13-209ENST00000511467 FOXS1O43638 330 aa4.25□□□□□ -1.73
PTPN13-209ENST00000511467 FAM157CP0CG43 387 aa4.25□□□□□ -1.73
PTPN13-209ENST00000511467 ZNF705BP0CI00 300 aaPredicted RBP4.25□□□□□ -1.73
PTPN13-209ENST00000511467 GFRA1P56159 465 aa4.25□□□□□ -1.73
PTPN13-209ENST00000511467 MRPL54Q6P161 138 aaKnown RBP4.25□□□□□ -1.73
PTPN13-209ENST00000511467 CRIPAKQ8N1N5 446 aa4.25□□□□□ -1.73
PTPN13-209ENST00000511467 ST6GALNAC3Q8NDV1 305 aa4.25□□□□□ -1.73
PTPN13-209ENST00000511467 DNAJC4Q9NNZ3 241 aa4.25□□□□□ -1.73
PTPN13-209ENST00000511467 NRN1Q9NPD7 142 aa4.25□□□□□ -1.73
PTPN13-209ENST00000511467 NTN3O00634 580 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-209ENST00000511467 FCMRO60667 390 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 NDUFB8O95169 186 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 CD1BP29016 333 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 COL9A3Q14050 684 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-209ENST00000511467 RTP5Q14D33 572 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 ZNF774Q6NX45 483 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 MSRB3Q8IXL7 192 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 DTD1Q8TEA8 209 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 ZNF418Q8TF45 676 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-209ENST00000511467 RAX2Q96IS3 184 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 MMP28Q9H239 520 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 FRRS1LQ9P0K9 344 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 H3BRM9 83 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 ERVH48-1M5A8F1 160 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 ETV2O00321 342 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-209ENST00000511467 F12P00748 615 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-209ENST00000511467 BCL2P10415 239 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 TBC1D26Q86UD7 250 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 TP53INP2Q8IXH6 220 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 KIR3DL3Q8N743 410 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 ZFP62Q8NB50 900 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-209ENST00000511467 OR10G9Q8NGN4 311 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 OR10G7Q8NGN6 311 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 CISD1Q9NZ45 108 aaKnown RBP4.24□□□□□ -1.73
PTPN13-209ENST00000511467 TMA7Q9Y2S6 64 aaKnown RBP4.24□□□□□ -1.73
PTPN13-209ENST00000511467 C11orf94C9JXX5 98 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 AP4M1O00189 453 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 CCL3L1P16619 93 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 ZNF708P17019 499 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 METAP1P53582 386 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 LSM11P83369 360 aaKnown RBP eCLIP4.24□□□□□ -1.73
PTPN13-209ENST00000511467 SHISA6Q6ZSJ9 500 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 TEX45Q8NA69 505 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 GREM1O60565 184 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 MYOGP15173 224 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 UBE2L3P68036 154 aaKnown RBP4.24□□□□□ -1.73
PTPN13-209ENST00000511467 C19orf48Q6RUI8 117 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 TMPRSS9Q7Z410 1059 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 GBGT1Q8N5D6 347 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 OR13C5Q8NGS8 318 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 CCL19Q99731 98 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 DPM3Q9P2X0 92 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 OR4C46A6NHA9 309 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 HINT1P49773 126 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-209ENST00000511467 RHOGP84095 191 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 RRN3P1Q2M238 152 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 OR10AG1Q8NH19 301 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 FOXN4Q96NZ1 517 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 MCRIP2Q9BUT9 160 aaKnown RBP4.24□□□□□ -1.73
PTPN13-209ENST00000511467 UBE2L5PA0A1B0GUS4 154 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 FAM223BA6NKX1 122 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 CYB5R3P00387 301 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-209ENST00000511467 GATA4P43694 442 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 ZNF83P51522 516 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 SLAQ13239 276 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 VWA1Q6PCB0 445 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 FAM223AQ8IWN6 122 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 AMER3Q8N944 861 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 DEFB127Q9H1M4 99 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 KCNE5Q9UJ90 142 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 UFC1Q9Y3C8 167 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 OR51B2Q9Y5P1 312 aa4.24□□□□□ -1.73
PTPN13-209ENST00000511467 FAM231BA6NCW3 169 aa4.23□□□□□ -1.73
PTPN13-209ENST00000511467 CHST1O43916 411 aa4.23□□□□□ -1.73
PTPN13-209ENST00000511467 LILRA1O75019 489 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms