RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 DMDP11532 3685 aa11.85□□□□□ -0.51
AP003555.1-202ENST00000511013 PTPRBP23467 1997 aa11.85□□□□□ -0.51
AP003555.1-202ENST00000511013 MBD3L4A6NDZ8 208 aaPredicted RBP11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 MBD3L3A6NE82 208 aaPredicted RBP11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 MBD3L5A6NJ08 208 aaPredicted RBP11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 HIST1H2BKO60814 126 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 HIST1H2BJP06899 126 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 HIST1H2BOP23527 126 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 HIST1H2BBP33778 126 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 HIST1H2BDP58876 126 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 ERVK-16P61578 105 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 HIST1H2BCP62807 126 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 NKX6-1P78426 367 aaPredicted RBP11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 SRSF6Q13247 344 aaKnown RBP11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 HIST2H2BEQ16778 126 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 MORN2Q502X0 79 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 OR52E5Q8NH55 327 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 MBD3L2Q8NHZ7 208 aaPredicted RBP11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 HIST1H2BHQ93079 126 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 HIST1H2BNQ99877 126 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 HIST1H2BMQ99879 126 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 DKK4Q9UBT3 224 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 PRR14LQ5THK1 2151 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 SMCO3A2RU48 225 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 MPDU1O75352 247 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 YIF1AO95070 293 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 TRGC2P03986 189 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 HOXA4Q00056 320 aaPredicted RBP11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 TFF3Q07654 80 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 ADIRFQ15847 76 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 DEFB109BQ30KR1 87 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 BSXQ3C1V8 233 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 C3orf36Q3SXR2 165 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 PRAMEF5Q5TYX0 476 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 IGF2-ASQ6U949 168 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 OR4A16Q8NH70 328 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 RAB24Q969Q5 203 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 DIRC2Q96SL1 478 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 DCTN5Q9BTE1 182 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 GGACTQ9BVM4 153 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 QTRT1Q9BXR0 403 aaKnown RBP11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 GAR1Q9NY12 217 aaKnown RBP11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 OR6C3Q9NZP0 311 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 FREM2Q5SZK8 3169 aa11.84□□□□□ -0.51
AP003555.1-202ENST00000511013 HCFC1P51610 2035 aa11.83□□□□□ -0.52
AP003555.1-202ENST00000511013 IGKV1D-17A0A075B6S4 117 aa11.83□□□□□ -0.52
AP003555.1-202ENST00000511013 SPAARA0A1B0GVQ0 90 aa11.83□□□□□ -0.52
AP003555.1-202ENST00000511013 C15orf62A8K5M9 175 aa11.83□□□□□ -0.52
AP003555.1-202ENST00000511013 F2RL2O00254 374 aa11.83□□□□□ -0.52
AP003555.1-202ENST00000511013 FCGR3BO75015 233 aa11.83□□□□□ -0.52
AP003555.1-202ENST00000511013 CEACAM4O75871 244 aa11.83□□□□□ -0.52
AP003555.1-202ENST00000511013 IGHV3-13P01766 116 aa11.83□□□□□ -0.52
AP003555.1-202ENST00000511013 TMEM249Q2WGJ8 235 aa11.83□□□□□ -0.52
AP003555.1-202ENST00000511013 NEIL1Q96FI4 390 aaPredicted RBP11.83□□□□□ -0.52
AP003555.1-202ENST00000511013 DUSP13Q9UII6 198 aa11.83□□□□□ -0.52
AP003555.1-202ENST00000511013 GAB2Q9UQC2 676 aa11.83□□□□□ -0.52
AP003555.1-202ENST00000511013 WDR83OSQ9Y284 106 aa11.83□□□□□ -0.52
AP003555.1-202ENST00000511013 M0R1X1 148 aa11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 ITGB1BP1O14713 200 aa11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 PPP1R2P9O14990 202 aa11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 OR9G9P0C7N8 305 aa11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 EGR1P18146 543 aa11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 WT1P19544 449 aaPredicted RBP11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 CD1BP29016 333 aa11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 CDC34P49427 236 aaPredicted RBP11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 RAB7AP51149 207 aa11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 HNF4GQ14541 408 aa11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 LTC4SQ16873 150 aa11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 TIMM23BQ5SRD1 257 aa11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 OR4F5Q8NH21 305 aa11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 S100PBPQ96BU1 408 aa11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 OR4F4Q96R69 305 aa11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 MIOXQ9UGB7 285 aa11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 GALR2O43603 387 aaPredicted RBP11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 CRYAAP02489 173 aa11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 GLRXP35754 106 aa11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 ZNF83P51522 516 aa11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 KLF3P57682 345 aaPredicted RBP11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 PDLIM3Q53GG5 364 aaPredicted RBP11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 SPINK9Q5DT21 86 aa11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 GCSAMQ8N6F7 178 aa11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 OR10A7Q8NGE5 316 aa11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 RPUSD4Q96CM3 377 aaKnown RBP11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 ANAPC16Q96DE5 110 aa11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 MEGF10Q96KG7 1140 aa11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 OR5B12Q96R08 314 aa11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 S1PR3Q99500 378 aa11.82□□□□□ -0.52
AP003555.1-202ENST00000511013 COL6A3P12111 3177 aa11.81□□□□□ -0.52
AP003555.1-202ENST00000511013 H7BYZ3 331 aa11.81□□□□□ -0.52
AP003555.1-202ENST00000511013 HMGB3O15347 200 aaKnown RBP11.81□□□□□ -0.52
AP003555.1-202ENST00000511013 VENTXO95231 258 aa11.81□□□□□ -0.52
AP003555.1-202ENST00000511013 IFNA10P01566 189 aa11.81□□□□□ -0.52
AP003555.1-202ENST00000511013 TRGC1P0CF51 173 aa11.81□□□□□ -0.52
AP003555.1-202ENST00000511013 LINC00205P59089 165 aa11.81□□□□□ -0.52
AP003555.1-202ENST00000511013 RPL23P62829 140 aaKnown RBP11.81□□□□□ -0.52
AP003555.1-202ENST00000511013 SPNS3Q6ZMD2 512 aa11.81□□□□□ -0.52
AP003555.1-202ENST00000511013 C16orf82Q7Z2V1 217 aa11.81□□□□□ -0.52
AP003555.1-202ENST00000511013 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.81□□□□□ -0.52
AP003555.1-202ENST00000511013 RAB1CQ92928 201 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms