RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 FBXL15Q9H469 300 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 TAS2R5Q9NYW4 299 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 ITPR1Q14643 2758 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 RHODO00212 210 aa8□□□□□ -1.13
USP53-207ENST00000510852 NDUFB2O95178 105 aa8□□□□□ -1.13
USP53-207ENST00000510852 CT45A6P0DMU7 189 aa8□□□□□ -1.13
USP53-207ENST00000510852 CT45A5P0DMU8 189 aa8□□□□□ -1.13
USP53-207ENST00000510852 CT45A7P0DMV0 189 aa8□□□□□ -1.13
USP53-207ENST00000510852 ZNF708P17019 499 aa8□□□□□ -1.13
USP53-207ENST00000510852 SLC35A1P78382 337 aa8□□□□□ -1.13
USP53-207ENST00000510852 RHOGP84095 191 aa8□□□□□ -1.13
USP53-207ENST00000510852 RPL18Q07020 188 aaKnown RBP8□□□□□ -1.13
USP53-207ENST00000510852 ALG10Q5BKT4 473 aa8□□□□□ -1.13
USP53-207ENST00000510852 CT45A1Q5HYN5 189 aa8□□□□□ -1.13
USP53-207ENST00000510852 FAM27D1Q5T7N8 215 aa8□□□□□ -1.13
USP53-207ENST00000510852 SPATA31B1PQ5VZV4 182 aa8□□□□□ -1.13
USP53-207ENST00000510852 C9orf139Q6ZV77 190 aa8□□□□□ -1.13
USP53-207ENST00000510852 OR2T33Q8NG76 320 aa8□□□□□ -1.13
USP53-207ENST00000510852 CT45A3Q8NHU0 189 aa8□□□□□ -1.13
USP53-207ENST00000510852 RDH5Q92781 318 aa8□□□□□ -1.13
USP53-207ENST00000510852 RNASE7Q9H1E1 156 aaKnown RBP8□□□□□ -1.13
USP53-207ENST00000510852 AAMDCQ9H7C9 122 aa8□□□□□ -1.13
USP53-207ENST00000510852 SLC25A19Q9HC21 320 aa8□□□□□ -1.13
USP53-207ENST00000510852 KLHL13Q9P2N7 655 aa8□□□□□ -1.13
USP53-207ENST00000510852 PRNDQ9UKY0 176 aa8□□□□□ -1.13
USP53-207ENST00000510852 PKD1L2Q7Z442 2459 aa8□□□□□ -1.13
USP53-207ENST00000510852 FREM3P0C091 2139 aa8□□□□□ -1.13
USP53-207ENST00000510852 MPDZO75970 2070 aa8□□□□□ -1.13
USP53-207ENST00000510852 VSIG10L2P0DP72 767 aa8□□□□□ -1.13
USP53-207ENST00000510852 KLK2P20151 261 aa8□□□□□ -1.13
USP53-207ENST00000510852 RPL4P36578 427 aaKnown RBP8□□□□□ -1.13
USP53-207ENST00000510852 GPR50Q13585 617 aa8□□□□□ -1.13
USP53-207ENST00000510852 SLC35E3Q7Z769 313 aa8□□□□□ -1.13
USP53-207ENST00000510852 VKORC1L1Q8N0U8 176 aa8□□□□□ -1.13
USP53-207ENST00000510852 ZNF664Q8N3J9 261 aa8□□□□□ -1.13
USP53-207ENST00000510852 KLHDC1Q8N7A1 406 aa8□□□□□ -1.13
USP53-207ENST00000510852 LRTM2Q8N967 370 aa8□□□□□ -1.13
USP53-207ENST00000510852 OR10D3Q8NH80 312 aa8□□□□□ -1.13
USP53-207ENST00000510852 GPR148Q8TDV2 347 aa8□□□□□ -1.13
USP53-207ENST00000510852 ZNF418Q8TF45 676 aaPredicted RBP8□□□□□ -1.13
USP53-207ENST00000510852 ISOC1Q96CN7 298 aa8□□□□□ -1.13
USP53-207ENST00000510852 SRXN1Q9BYN0 137 aa8□□□□□ -1.13
USP53-207ENST00000510852 ZNF814B7Z6K7 855 aa7.99□□□□□ -1.13
USP53-207ENST00000510852 C11orf98E9PRG8 122 aa7.99□□□□□ -1.13
USP53-207ENST00000510852 CXCL13O43927 109 aa7.99□□□□□ -1.13
USP53-207ENST00000510852 PPP1R3DO95685 299 aa7.99□□□□□ -1.13
USP53-207ENST00000510852 NRASP01111 189 aa7.99□□□□□ -1.13
USP53-207ENST00000510852 PMP2P02689 132 aa7.99□□□□□ -1.13
USP53-207ENST00000510852 RCC1P18754 421 aaPredicted RBP7.99□□□□□ -1.13
USP53-207ENST00000510852 LOXP28300 417 aaPredicted RBP7.99□□□□□ -1.13
USP53-207ENST00000510852 ACOT6Q3I5F7 207 aaPredicted RBP7.99□□□□□ -1.13
USP53-207ENST00000510852 ZNF404Q494X3 552 aa7.99□□□□□ -1.13
USP53-207ENST00000510852 C12orf73Q69YU5 71 aa7.99□□□□□ -1.13
USP53-207ENST00000510852 GLCCI1Q86VQ1 547 aa7.99□□□□□ -1.13
USP53-207ENST00000510852 OR13C8Q8NGS7 320 aa7.99□□□□□ -1.13
USP53-207ENST00000510852 FNDC9Q8TBE3 224 aa7.99□□□□□ -1.13
USP53-207ENST00000510852 RXFP4Q8TDU9 374 aa7.99□□□□□ -1.13
USP53-207ENST00000510852 SLC7A6Q92536 515 aa7.99□□□□□ -1.13
USP53-207ENST00000510852 GPX7Q96SL4 187 aaPredicted RBP7.99□□□□□ -1.13
USP53-207ENST00000510852 PSMG3Q9BT73 122 aaPredicted RBP7.99□□□□□ -1.13
USP53-207ENST00000510852 MBNL3Q9NUK0 354 aaKnown RBP7.99□□□□□ -1.13
USP53-207ENST00000510852 TVP23BQ9NYZ1 205 aa7.99□□□□□ -1.13
USP53-207ENST00000510852 SIRT4Q9Y6E7 314 aaPredicted RBP7.99□□□□□ -1.13
USP53-207ENST00000510852 NBEAQ8NFP9 2946 aa7.99□□□□□ -1.13
USP53-207ENST00000510852 IGHV3-15A0A0B4J1V0 119 aa7.99□□□□□ -1.13
USP53-207ENST00000510852 M0R129 80 aa7.99□□□□□ -1.13
USP53-207ENST00000510852 CRXO43186 299 aaPredicted RBP7.99□□□□□ -1.13
USP53-207ENST00000510852 SPINT2O43291 252 aa7.99□□□□□ -1.13
USP53-207ENST00000510852 FGF2P09038 288 aa7.99□□□□□ -1.13
USP53-207ENST00000510852 PSG1P11464 419 aa7.99□□□□□ -1.13
USP53-207ENST00000510852 PSG2P11465 335 aa7.99□□□□□ -1.13
USP53-207ENST00000510852 HOXA5P20719 270 aa7.99□□□□□ -1.13
USP53-207ENST00000510852 S100A10P60903 97 aa7.99□□□□□ -1.13
USP53-207ENST00000510852 H3F3AP84243 136 aa7.99□□□□□ -1.13
USP53-207ENST00000510852 OR13A1Q8NGR1 328 aa7.99□□□□□ -1.13
USP53-207ENST00000510852 CABLES2Q9BTV7 478 aa7.99□□□□□ -1.13
USP53-207ENST00000510852 PLEKHB1Q9UF11 243 aaPredicted RBP7.99□□□□□ -1.13
USP53-207ENST00000510852 IER3IP1Q9Y5U9 82 aa7.99□□□□□ -1.13
USP53-207ENST00000510852 TLN1Q9Y490 2541 aaKnown RBP7.99□□□□□ -1.13
USP53-207ENST00000510852 MAP1BP46821 2468 aaKnown RBP7.98□□□□□ -1.13
USP53-207ENST00000510852 ZNF407Q9C0G0 2248 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 FABP5P3A8MUU1 101 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 ZNHIT1O43257 154 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 RAMP1O60894 148 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 TOXO94900 526 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 APOC3P02656 99 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 CD14P08571 375 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 GLI4P10075 376 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 HLA-DOBP13765 273 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 COL8A1P27658 744 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 CHATP28329 748 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 ISL1P61371 349 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 HIST1H3AP68431 136 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 HERPUD1Q15011 391 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 ZNF324BQ6AW86 544 aaPredicted RBP7.98□□□□□ -1.13
USP53-207ENST00000510852 HIST2H3AQ71DI3 136 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 TCTEX1D1Q8N7M0 179 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 OR4F17Q8NGA8 305 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 OR4F5Q8NH21 305 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 SEC22AQ96IW7 307 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms