RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 TRAV24A0A0B4J272 114 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 MARCH11A6NNE9 402 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 KBTBD11O94819 623 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 METTL15P1P0C7V9 234 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 OTX1P32242 354 aaPredicted RBP4.27□□□□□ -1.73
PHF3-210ENST00000509876 ATP5IP56385 69 aaPredicted RBP4.27□□□□□ -1.73
PHF3-210ENST00000509876 UNC119Q13432 240 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 OR2C3Q8N628 320 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 ANGPTL6Q8NI99 470 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 CHRDL1Q9BU40 450 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 TUBA4BQ9H853 241 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 ARID1BQ8NFD5 2236 aaPredicted RBP4.27□□□□□ -1.73
PHF3-210ENST00000509876 IGLV3-9A0A075B6K5 115 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 SAA2-SAA4A0A096LPE2 208 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 SAA2P0DJI9 122 aaPredicted RBP4.27□□□□□ -1.73
PHF3-210ENST00000509876 HIST1H1EP10412 219 aaKnown RBP4.27□□□□□ -1.73
PHF3-210ENST00000509876 HCP5Q6MZN7 132 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 HEPN1Q6WQI6 88 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 MAPK1IP1LQ8NDC0 245 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 LINC00052Q96N35 136 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 TPPP3Q9BW30 176 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 V9GYH0 126 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 PCDH15Q96QU1 1955 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 IGKV1-9A0A0C4DH69 117 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 PSMB11A5LHX3 300 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 TMEM177Q53S58 311 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 TMEM42Q69YG0 159 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 C11orf87Q6NUJ2 197 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 TEPPQ6URK8 271 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 KIR3DL3Q8N743 410 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 ADAD2Q8NCV1 583 aaKnown RBP4.27□□□□□ -1.73
PHF3-210ENST00000509876 OR4X1Q8NH49 305 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 ZFHX2Q9C0A1 2572 aaPredicted RBP4.27□□□□□ -1.73
PHF3-210ENST00000509876 SOD3P08294 240 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 INHBBP09529 407 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 MORN2Q502X0 79 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 BRD3OSQ6XYD6 125 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 OR5C1Q8NGR4 320 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 TECRQ9NZ01 308 aaKnown RBP4.26□□□□□ -1.73
PHF3-210ENST00000509876 FAM90A26D6RGX4 464 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 S1PR2O95136 353 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 RAB9AP51151 201 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 UBE2E1P51965 193 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 POLR2GP62487 172 aaKnown RBP eCLIP4.26□□□□□ -1.73
PHF3-210ENST00000509876 KLRD1Q13241 179 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 OR5I1Q13606 314 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 ZNF818PQ6ZRF7 136 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 STXBP6Q8NFX7 210 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 SLC25A38Q96DW6 304 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 HS3ST6Q96QI5 342 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 FBLN5Q9UBX5 448 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 VSIG4Q9Y279 399 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 DOCK9Q9BZ29 2069 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 COL4A2P08572 1712 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 CACNA1BQ00975 2339 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 IGHV1-69DA0A0B4J2H0 117 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 FAM24AA6NFZ4 105 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 UMAD1C9J7I0 102 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 H3BUX3 64 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 TIMM23O14925 209 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 IGHV1-69P01742 117 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 SULT1A1P50225 295 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 PLAURQ03405 335 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 KHDC3LQ587J8 217 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 OR4A47Q6IF82 309 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 LYPD2Q6UXB3 125 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 Q71RC1 249 aaPredicted RBP4.26□□□□□ -1.73
PHF3-210ENST00000509876 MED9Q9NWA0 146 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 I3L521 148 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 TFF1P04155 84 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 SLC25A5P05141 298 aaKnown RBP4.26□□□□□ -1.73
PHF3-210ENST00000509876 SMIM17P0DL12 118 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 SLC25A4P12235 298 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 PRTN3P24158 256 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 RAB32Q13637 225 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 HMGN3Q15651 99 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 SRSF7Q16629 238 aaKnown RBP eCLIP4.26□□□□□ -1.73
PHF3-210ENST00000509876 PRSS54Q6PEW0 395 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 LYZL2Q7Z4W2 148 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 COMMD7Q86VX2 200 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 FGFRL1Q8N441 504 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 BLNKQ8WV28 456 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 RNF5Q99942 180 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 RIF1Q5UIP0 2472 aaKnown RBP4.26□□□□□ -1.73
PHF3-210ENST00000509876 PRR32B1ATL7 298 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 MMP9P14780 707 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 MPZP25189 248 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 SELENOHQ8IZQ5 122 aaKnown RBP4.26□□□□□ -1.73
PHF3-210ENST00000509876 OR5B3Q8NH48 314 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 RAX2Q96IS3 184 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 FBXL7Q9UJT9 491 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 UFC1Q9Y3C8 167 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 TIMM8BQ9Y5J9 83 aaPredicted RBP4.26□□□□□ -1.73
PHF3-210ENST00000509876 IGKV3-7A0A075B6H7 116 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 HELTA6NFD8 242 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 F8W036 122 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 BCL2L11O43521 198 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 HYPMO75409 117 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 S100A1P23297 94 aa4.26□□□□□ -1.73
PHF3-210ENST00000509876 RPS11P62280 158 aaKnown RBP eCLIP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms