RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 CD300LFQ8TDQ1 290 aa11.87□□□□□ -0.51
RNF4-213ENST00000509388 DDB2Q92466 427 aa11.87□□□□□ -0.51
RNF4-213ENST00000509388 TSNAXQ99598 290 aaKnown RBP11.87□□□□□ -0.51
RNF4-213ENST00000509388 NPFFR1Q9GZQ6 430 aa11.87□□□□□ -0.51
RNF4-213ENST00000509388 LIN7CQ9NUP9 197 aaKnown RBP11.87□□□□□ -0.51
RNF4-213ENST00000509388 GPR132Q9UNW8 380 aa11.87□□□□□ -0.51
RNF4-213ENST00000509388 MOB4Q9Y3A3 225 aa11.87□□□□□ -0.51
RNF4-213ENST00000509388 TEX13DA0A0J9YY54 714 aaPredicted RBP11.86□□□□□ -0.51
RNF4-213ENST00000509388 MPPED1O15442 326 aa11.86□□□□□ -0.51
RNF4-213ENST00000509388 CRYZL1O95825 349 aa11.86□□□□□ -0.51
RNF4-213ENST00000509388 IGKV1-16P04430 117 aa11.86□□□□□ -0.51
RNF4-213ENST00000509388 LGALS7P47929 136 aa11.86□□□□□ -0.51
RNF4-213ENST00000509388 RPL15P61313 204 aaKnown RBP11.86□□□□□ -0.51
RNF4-213ENST00000509388 RND3P61587 244 aa11.86□□□□□ -0.51
RNF4-213ENST00000509388 SRSF2Q01130 221 aaKnown RBP11.86□□□□□ -0.51
RNF4-213ENST00000509388 PLGLAQ15195 96 aa11.86□□□□□ -0.51
RNF4-213ENST00000509388 TMED4Q7Z7H5 227 aa11.86□□□□□ -0.51
RNF4-213ENST00000509388 TCTEX1D1Q8N7M0 179 aa11.86□□□□□ -0.51
RNF4-213ENST00000509388 ZFAND2BQ8WV99 257 aa11.86□□□□□ -0.51
RNF4-213ENST00000509388 MRGPRFQ96AM1 343 aa11.86□□□□□ -0.51
RNF4-213ENST00000509388 HARBI1Q96MB7 349 aa11.86□□□□□ -0.51
RNF4-213ENST00000509388 RASL11BQ9BPW5 248 aa11.86□□□□□ -0.51
RNF4-213ENST00000509388 FAM240BA0A1B0GVZ2 78 aa11.85□□□□□ -0.51
RNF4-213ENST00000509388 NBR2O15453 112 aa11.85□□□□□ -0.51
RNF4-213ENST00000509388 AKR1C4P17516 323 aa11.85□□□□□ -0.51
RNF4-213ENST00000509388 F2RP25116 425 aa11.85□□□□□ -0.51
RNF4-213ENST00000509388 ASAH1Q13510 395 aa11.85□□□□□ -0.51
RNF4-213ENST00000509388 ARSJQ5FYB0 599 aaPredicted RBP11.85□□□□□ -0.51
RNF4-213ENST00000509388 PRIMA1Q86XR5 153 aa11.85□□□□□ -0.51
RNF4-213ENST00000509388 Q8N6K4 173 aa11.85□□□□□ -0.51
RNF4-213ENST00000509388 OSR1Q8TAX0 266 aaPredicted RBP11.85□□□□□ -0.51
RNF4-213ENST00000509388 RBMXL1Q96E39 390 aaKnown RBP11.85□□□□□ -0.51
RNF4-213ENST00000509388 AIFM2Q9BRQ8 373 aa11.85□□□□□ -0.51
RNF4-213ENST00000509388 RTBDNQ9BSG5 229 aaPredicted RBP11.85□□□□□ -0.51
RNF4-213ENST00000509388 C5orf66Q9H5L9 145 aa11.85□□□□□ -0.51
RNF4-213ENST00000509388 VSIG4Q9Y279 399 aa11.85□□□□□ -0.51
RNF4-213ENST00000509388 KCNIP3Q9Y2W7 256 aa11.85□□□□□ -0.51
RNF4-213ENST00000509388 C3orf85A0A1B0GTC6 90 aa11.84□□□□□ -0.51
RNF4-213ENST00000509388 RBFOX2O43251 390 aaKnown RBP eCLIP11.84□□□□□ -0.51
RNF4-213ENST00000509388 FGF16O43320 207 aa11.84□□□□□ -0.51
RNF4-213ENST00000509388 CHST1O43916 411 aa11.84□□□□□ -0.51
RNF4-213ENST00000509388 NDUFB6O95139 128 aa11.84□□□□□ -0.51
RNF4-213ENST00000509388 HPRT1P00492 218 aa11.84□□□□□ -0.51
RNF4-213ENST00000509388 HRASP01112 189 aa11.84□□□□□ -0.51
RNF4-213ENST00000509388 SERPINE2P07093 398 aa11.84□□□□□ -0.51
RNF4-213ENST00000509388 F2RL1P55085 397 aa11.84□□□□□ -0.51
RNF4-213ENST00000509388 IFITM3Q01628 133 aa11.84□□□□□ -0.51
RNF4-213ENST00000509388 VMA21Q3ZAQ7 101 aa11.84□□□□□ -0.51
RNF4-213ENST00000509388 FBLN7Q53RD9 439 aa11.84□□□□□ -0.51
RNF4-213ENST00000509388 TMEM177Q53S58 311 aa11.84□□□□□ -0.51
RNF4-213ENST00000509388 C9orf152Q5JTZ5 239 aa11.84□□□□□ -0.51
RNF4-213ENST00000509388 SGPP2Q8IWX5 399 aa11.84□□□□□ -0.51
RNF4-213ENST00000509388 ENKURQ8TC29 256 aa11.84□□□□□ -0.51
RNF4-213ENST00000509388 RITA1Q96K30 269 aa11.84□□□□□ -0.51
RNF4-213ENST00000509388 PRSS22Q9GZN4 317 aa11.84□□□□□ -0.51
RNF4-213ENST00000509388 NAA60Q9H7X0 242 aa11.84□□□□□ -0.51
RNF4-213ENST00000509388 RAMP3O60896 148 aa11.83□□□□□ -0.52
RNF4-213ENST00000509388 B3GALNT1O75752 331 aa11.83□□□□□ -0.52
RNF4-213ENST00000509388 ANXA3P12429 323 aa11.83□□□□□ -0.52
RNF4-213ENST00000509388 LPAR6P43657 344 aa11.83□□□□□ -0.52
RNF4-213ENST00000509388 RIPPLY3P57055 190 aa11.83□□□□□ -0.52
RNF4-213ENST00000509388 TAS2R31P59538 309 aa11.83□□□□□ -0.52
RNF4-213ENST00000509388 PSG5Q15238 335 aa11.83□□□□□ -0.52
RNF4-213ENST00000509388 CENPSQ8N2Z9 138 aa11.83□□□□□ -0.52
RNF4-213ENST00000509388 NPBQ8NG41 125 aa11.83□□□□□ -0.52
RNF4-213ENST00000509388 TBC1D24Q9ULP9 559 aa11.83□□□□□ -0.52
RNF4-213ENST00000509388 MXRA5Q9NR99 2828 aa11.82□□□□□ -0.52
RNF4-213ENST00000509388 H0Y980 276 aa11.82□□□□□ -0.52
RNF4-213ENST00000509388 RRHO14718 337 aa11.82□□□□□ -0.52
RNF4-213ENST00000509388 SLC25A17O43808 307 aa11.82□□□□□ -0.52
RNF4-213ENST00000509388 SPDEFO95238 335 aa11.82□□□□□ -0.52
RNF4-213ENST00000509388 CNTFRP26992 372 aa11.82□□□□□ -0.52
RNF4-213ENST00000509388 SLC6A1P30531 599 aa11.82□□□□□ -0.52
RNF4-213ENST00000509388 BTCP35070 178 aa11.82□□□□□ -0.52
RNF4-213ENST00000509388 ERVK-16P61578 105 aa11.82□□□□□ -0.52
RNF4-213ENST00000509388 BLCAPP62952 87 aa11.82□□□□□ -0.52
RNF4-213ENST00000509388 TRIM16LQ309B1 348 aa11.82□□□□□ -0.52
RNF4-213ENST00000509388 LIN54Q6MZP7 749 aa11.82□□□□□ -0.52
RNF4-213ENST00000509388 C5orf56Q8N8D9 126 aa11.82□□□□□ -0.52
RNF4-213ENST00000509388 ADAD2Q8NCV1 583 aaKnown RBP11.82□□□□□ -0.52
RNF4-213ENST00000509388 VSTM2AQ8TAG5 236 aa11.82□□□□□ -0.52
RNF4-213ENST00000509388 FBXL15Q9H469 300 aa11.82□□□□□ -0.52
RNF4-213ENST00000509388 PLEKHA2Q9HB19 425 aa11.82□□□□□ -0.52
RNF4-213ENST00000509388 PLSCR3Q9NRY6 295 aa11.82□□□□□ -0.52
RNF4-213ENST00000509388 FAM212BQ9NTI7 297 aaPredicted RBP11.82□□□□□ -0.52
RNF4-213ENST00000509388 METTL1Q9UBP6 276 aaKnown RBP11.82□□□□□ -0.52
RNF4-213ENST00000509388 CRYM-AS1A6NIL9 109 aa11.81□□□□□ -0.52
RNF4-213ENST00000509388 ARPC1BO15143 372 aaKnown RBP11.81□□□□□ -0.52
RNF4-213ENST00000509388 ATG12O94817 140 aa11.81□□□□□ -0.52
RNF4-213ENST00000509388 TCRBP04435 133 aa11.81□□□□□ -0.52
RNF4-213ENST00000509388 NQO2P16083 231 aa11.81□□□□□ -0.52
RNF4-213ENST00000509388 BRWD1-AS2P59051 145 aa11.81□□□□□ -0.52
RNF4-213ENST00000509388 DHODHQ02127 395 aa11.81□□□□□ -0.52
RNF4-213ENST00000509388 C5orf64Q2M2E5 130 aa11.81□□□□□ -0.52
RNF4-213ENST00000509388 SP6Q3SY56 376 aa11.81□□□□□ -0.52
RNF4-213ENST00000509388 TMEM128Q5BJH2 165 aa11.81□□□□□ -0.52
RNF4-213ENST00000509388 Q8N9W7 124 aa11.81□□□□□ -0.52
RNF4-213ENST00000509388 DMBX1Q8NFW5 382 aa11.81□□□□□ -0.52
RNF4-213ENST00000509388 CLCC1Q96S66 551 aa11.81□□□□□ -0.52
RNF4-213ENST00000509388 RANBP3Q9H6Z4 567 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms