RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 CMBLQ96DG6 245 aa1.25□□□□□ -2.21
XRCC4-204ENST00000509268 ZHX1-C8orf76Q96EF9 292 aa1.25□□□□□ -2.21
XRCC4-204ENST00000509268 GNPNAT1Q96EK6 184 aaPredicted RBP1.25□□□□□ -2.21
XRCC4-204ENST00000509268 CNBD2Q96M20 576 aa1.25□□□□□ -2.21
XRCC4-204ENST00000509268 ERMAPQ96PL5 475 aaPredicted RBP1.25□□□□□ -2.21
XRCC4-204ENST00000509268 TSPAN32Q96QS1 320 aa1.25□□□□□ -2.21
XRCC4-204ENST00000509268 PEBP4Q96S96 227 aa1.25□□□□□ -2.21
XRCC4-204ENST00000509268 CCL13Q99616 98 aa1.25□□□□□ -2.21
XRCC4-204ENST00000509268 TBL1YQ9BQ87 522 aa1.25□□□□□ -2.21
XRCC4-204ENST00000509268 TMEM147Q9BVK8 224 aa1.25□□□□□ -2.21
XRCC4-204ENST00000509268 PLA2G2FQ9BZM2 168 aa1.25□□□□□ -2.21
XRCC4-204ENST00000509268 TMEM222Q9H0R3 208 aa1.25□□□□□ -2.21
XRCC4-204ENST00000509268 LINC00574Q9H8X3 128 aa1.25□□□□□ -2.21
XRCC4-204ENST00000509268 ZNF331Q9NQX6 463 aaPredicted RBP1.25□□□□□ -2.21
XRCC4-204ENST00000509268 DHCR7Q9UBM7 475 aaKnown RBP1.25□□□□□ -2.21
XRCC4-204ENST00000509268 SLC23A2Q9UGH3 650 aa1.25□□□□□ -2.21
XRCC4-204ENST00000509268 DNAJC12Q9UKB3 198 aa1.25□□□□□ -2.21
XRCC4-204ENST00000509268 PRNDQ9UKY0 176 aa1.25□□□□□ -2.21
XRCC4-204ENST00000509268 PYCARDQ9ULZ3 195 aa1.25□□□□□ -2.21
XRCC4-204ENST00000509268 FIS1Q9Y3D6 152 aa1.25□□□□□ -2.21
XRCC4-204ENST00000509268 TMEM14AQ9Y6G1 99 aa1.25□□□□□ -2.21
XRCC4-204ENST00000509268 TMEM56-RWDD3S4R434 201 aa1.25□□□□□ -2.21
XRCC4-204ENST00000509268 CPDO75976 1380 aa1.25□□□□□ -2.21
XRCC4-204ENST00000509268 DCCP43146 1447 aa1.25□□□□□ -2.21
XRCC4-204ENST00000509268 AHNAKQ09666 5890 aaKnown RBP1.25□□□□□ -2.21
XRCC4-204ENST00000509268 SYNMO15061 1565 aa1.25□□□□□ -2.21
XRCC4-204ENST00000509268 NACADO15069 1562 aa1.25□□□□□ -2.21
XRCC4-204ENST00000509268 IGHV3-21A0A0B4J1V1 117 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 TRAPPC13A5PLN9 417 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 OR5H14A6NHG9 310 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 ZNF729A6NN14 1252 aaPredicted RBP1.24□□□□□ -2.21
XRCC4-204ENST00000509268 A8MUN3 132 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 LST1O00453 97 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 COX7A2LO14548 114 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 ARPC5O15511 151 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 RBFOX2O43251 390 aaKnown RBP eCLIP1.24□□□□□ -2.21
XRCC4-204ENST00000509268 ZNF682O95780 498 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 DHFRP00374 187 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 HLA-DRB1P01911 266 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 SERPINE1P05121 402 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 ADRA2AP08913 450 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 C1GALT1C1LP0DN25 315 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 ELK1P19419 428 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 GZMHP20718 246 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 NTF3P20783 257 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 GLRXP35754 106 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 MNAT1P51948 309 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 TCTAP57738 103 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 DEFA3P59666 94 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 FGF12P61328 243 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 RHOBP62745 196 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 GNG5P63218 68 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 FABP9Q0Z7S8 132 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 DEFB116Q30KQ4 102 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 C12orf74Q32Q52 190 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 PLPPR5Q32ZL2 321 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 TNFAIP8L3Q5GJ75 292 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 ARHGAP21Q5T5U3 1957 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 TMEM78Q5T7P6 136 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 AHDC1Q5TGY3 1603 aaPredicted RBP1.24□□□□□ -2.21
XRCC4-204ENST00000509268 TBPL2Q6SJ96 375 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 C5orf46Q6UWT4 87 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 GPHB5Q86YW7 130 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 BAP18Q8IXM2 172 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 EXOC3-AS1Q8N2X6 119 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 STX19Q8N4C7 294 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 ANKRD29Q8N6D5 301 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 PACRGLQ8N7B6 248 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 ZNF283Q8N7M2 679 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 CYB561D1Q8N8Q1 229 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 TMEM35BQ8NCS4 154 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 OR11G2Q8NGC1 345 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 CT55Q8WUE5 264 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 FRZBQ92765 325 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 RNASE6Q93091 150 aaKnown RBP1.24□□□□□ -2.21
XRCC4-204ENST00000509268 MS4A6EQ96DS6 147 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 OR2D2Q9H210 308 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 CISHQ9NSE2 258 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 MED29Q9NX70 200 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 RSL24D1Q9UHA3 163 aaKnown RBP1.24□□□□□ -2.21
XRCC4-204ENST00000509268 IGSF9BQ9UPX0 1349 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 THSD7AQ9UPZ6 1657 aa1.24□□□□□ -2.21
XRCC4-204ENST00000509268 CHD5Q8TDI0 1954 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 ITGB4P16144 1822 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 MYO5BQ9ULV0 1848 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 RPRD2Q5VT52 1461 aaKnown RBP1.23□□□□□ -2.21
XRCC4-204ENST00000509268 PTPRTO14522 1441 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.23□□□□□ -2.21
XRCC4-204ENST00000509268 IGHV1-69-2A0A0G2JMI3 117 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 A0A1W2PQ67 120 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 PRORSD1PA6NEY8 169 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 A8MWP4 228 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.23□□□□□ -2.21
XRCC4-204ENST00000509268 TMX2-CTNND1H3BSU7 103 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 GSTZ1O43708 216 aaPredicted RBP1.23□□□□□ -2.21
XRCC4-204ENST00000509268 ORC5O43913 435 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 IGHV1-46P01743 117 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 TRGV3P03979 118 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 CRHP06850 196 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 CPMP14384 443 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms