RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 C12orf4Q9NQ89 552 aa12.57□□□□□ -0.4
LMNA-222ENST00000508500 TPSG1Q9NRR2 321 aa12.57□□□□□ -0.4
LMNA-222ENST00000508500 VSIG4Q9Y279 399 aa12.57□□□□□ -0.4
LMNA-222ENST00000508500 RAMP3O60896 148 aa12.56□□□□□ -0.4
LMNA-222ENST00000508500 IGKV1-16P04430 117 aa12.56□□□□□ -0.4
LMNA-222ENST00000508500 ELK1P19419 428 aa12.56□□□□□ -0.4
LMNA-222ENST00000508500 MC5RP33032 325 aa12.56□□□□□ -0.4
LMNA-222ENST00000508500 PITPNAQ00169 270 aa12.56□□□□□ -0.4
LMNA-222ENST00000508500 ZNF660Q6AZW8 331 aaPredicted RBP12.56□□□□□ -0.4
LMNA-222ENST00000508500 CNIH2Q6PI25 160 aa12.56□□□□□ -0.4
LMNA-222ENST00000508500 TMEM65Q6PI78 240 aa12.56□□□□□ -0.4
LMNA-222ENST00000508500 LGALS14Q8TCE9 139 aa12.56□□□□□ -0.4
LMNA-222ENST00000508500 EDARADDQ8WWZ3 215 aa12.56□□□□□ -0.4
LMNA-222ENST00000508500 FAM103A1Q9BTL3 118 aaKnown RBP12.56□□□□□ -0.4
LMNA-222ENST00000508500 TOLLIPQ9H0E2 274 aa12.56□□□□□ -0.4
LMNA-222ENST00000508500 GHITMQ9H3K2 345 aa12.56□□□□□ -0.4
LMNA-222ENST00000508500 WASHC3Q9Y3C0 194 aa12.56□□□□□ -0.4
LMNA-222ENST00000508500 V9GYH0 126 aa12.56□□□□□ -0.4
LMNA-222ENST00000508500 A0A1W2PN81 502 aa12.55□□□□□ -0.4
LMNA-222ENST00000508500 TRDCB7Z8K6 153 aa12.55□□□□□ -0.4
LMNA-222ENST00000508500 H7C2Y5 167 aa12.55□□□□□ -0.4
LMNA-222ENST00000508500 HSPA12AO43301 675 aa12.55□□□□□ -0.4
LMNA-222ENST00000508500 CHRNA7P36544 502 aa12.55□□□□□ -0.4
LMNA-222ENST00000508500 CD69Q07108 199 aa12.55□□□□□ -0.4
LMNA-222ENST00000508500 ZNF616Q08AN1 781 aa12.55□□□□□ -0.4
LMNA-222ENST00000508500 PSG5Q15238 335 aa12.55□□□□□ -0.4
LMNA-222ENST00000508500 ZNF260Q3ZCT1 412 aa12.55□□□□□ -0.4
LMNA-222ENST00000508500 PYHIN1Q6K0P9 492 aa12.55□□□□□ -0.4
LMNA-222ENST00000508500 OR56B1Q8NGI3 324 aa12.55□□□□□ -0.4
LMNA-222ENST00000508500 OR5H6Q8NGV6 325 aa12.55□□□□□ -0.4
LMNA-222ENST00000508500 C5orf30Q96GV9 206 aa12.55□□□□□ -0.4
LMNA-222ENST00000508500 CLCC1Q96S66 551 aa12.55□□□□□ -0.4
LMNA-222ENST00000508500 RDH8Q9NYR8 311 aa12.55□□□□□ -0.4
LMNA-222ENST00000508500 EXTL2Q9UBQ6 330 aa12.55□□□□□ -0.4
LMNA-222ENST00000508500 RAB22AQ9UL26 194 aa12.55□□□□□ -0.4
LMNA-222ENST00000508500 MGAT4AQ9UM21 535 aa12.55□□□□□ -0.4
LMNA-222ENST00000508500 A0A0B4J203 849 aa12.54□□□□□ -0.4
LMNA-222ENST00000508500 METTL21EPA6NDL7 271 aa12.54□□□□□ -0.4
LMNA-222ENST00000508500 RAB27BO00194 218 aa12.54□□□□□ -0.4
LMNA-222ENST00000508500 CTDSPLO15194 276 aa12.54□□□□□ -0.4
LMNA-222ENST00000508500 RBBP9O75884 186 aa12.54□□□□□ -0.4
LMNA-222ENST00000508500 GSTP1P09211 210 aaKnown RBP12.54□□□□□ -0.4
LMNA-222ENST00000508500 GSTT2P0CG29 244 aa12.54□□□□□ -0.4
LMNA-222ENST00000508500 GSTT2BP0CG30 244 aa12.54□□□□□ -0.4
LMNA-222ENST00000508500 ECI1P42126 302 aa12.54□□□□□ -0.4
LMNA-222ENST00000508500 SSBP2P81877 361 aaPredicted RBP12.54□□□□□ -0.4
LMNA-222ENST00000508500 MRPS10P82664 201 aaKnown RBP12.54□□□□□ -0.4
LMNA-222ENST00000508500 IGSF11Q5DX21 431 aa12.54□□□□□ -0.4
LMNA-222ENST00000508500 HACD4Q5VWC8 232 aa12.54□□□□□ -0.4
LMNA-222ENST00000508500 DCUN1D4Q92564 292 aa12.54□□□□□ -0.4
LMNA-222ENST00000508500 RNF5Q99942 180 aa12.54□□□□□ -0.4
LMNA-222ENST00000508500 SRRQ9GZT4 340 aa12.54□□□□□ -0.4
LMNA-222ENST00000508500 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.54□□□□□ -0.4
LMNA-222ENST00000508500 DIABLOQ9NR28 239 aa12.54□□□□□ -0.4
LMNA-222ENST00000508500 RHBDL2Q9NX52 303 aa12.54□□□□□ -0.4
LMNA-222ENST00000508500 METTL1Q9UBP6 276 aaKnown RBP12.54□□□□□ -0.4
LMNA-222ENST00000508500 MFNGO00587 321 aa12.53□□□□□ -0.4
LMNA-222ENST00000508500 ARPC1BO15143 372 aaKnown RBP12.53□□□□□ -0.4
LMNA-222ENST00000508500 UPK1BO75841 260 aa12.53□□□□□ -0.4
LMNA-222ENST00000508500 CA2P00918 260 aa12.53□□□□□ -0.4
LMNA-222ENST00000508500 EIF4EP06730 217 aaKnown RBP12.53□□□□□ -0.4
LMNA-222ENST00000508500 FCGR3AP08637 254 aa12.53□□□□□ -0.4
LMNA-222ENST00000508500 OR8U8P0C7N1 319 aa12.53□□□□□ -0.4
LMNA-222ENST00000508500 SLURP1P55000 103 aa12.53□□□□□ -0.4
LMNA-222ENST00000508500 PPP1R27Q86WC6 154 aa12.53□□□□□ -0.4
LMNA-222ENST00000508500 MAFIPQ8WZ33 124 aa12.53□□□□□ -0.4
LMNA-222ENST00000508500 DLX4Q92988 240 aaPredicted RBP12.53□□□□□ -0.4
LMNA-222ENST00000508500 SLC25A38Q96DW6 304 aa12.53□□□□□ -0.4
LMNA-222ENST00000508500 CABLES2Q9BTV7 478 aa12.53□□□□□ -0.4
LMNA-222ENST00000508500 ZNF230Q9UIE0 474 aaPredicted RBP12.53□□□□□ -0.4
LMNA-222ENST00000508500 ELF5Q9UKW6 265 aaPredicted RBP12.53□□□□□ -0.4
LMNA-222ENST00000508500 FOXA2Q9Y261 457 aaPredicted RBP12.53□□□□□ -0.4
LMNA-222ENST00000508500 IGHV4OR15-8A0A075B7B6 117 aa12.52□□□□□ -0.41
LMNA-222ENST00000508500 IGKV1D-8A0A087WSZ0 117 aa12.52□□□□□ -0.41
LMNA-222ENST00000508500 A0A087WW49 117 aa12.52□□□□□ -0.41
LMNA-222ENST00000508500 TRBV6-7A0A0A0MS04 114 aa12.52□□□□□ -0.41
LMNA-222ENST00000508500 FABP7O15540 132 aa12.52□□□□□ -0.41
LMNA-222ENST00000508500 XRCC3O43542 346 aa12.52□□□□□ -0.41
LMNA-222ENST00000508500 IGLV2-23P01705 113 aa12.52□□□□□ -0.41
LMNA-222ENST00000508500 GNB3P16520 340 aa12.52□□□□□ -0.41
LMNA-222ENST00000508500 RPS16P62249 146 aaKnown RBP12.52□□□□□ -0.41
LMNA-222ENST00000508500 IL18Q14116 193 aa12.52□□□□□ -0.41
LMNA-222ENST00000508500 PLGLAQ15195 96 aa12.52□□□□□ -0.41
LMNA-222ENST00000508500 ZNF79Q15937 498 aa12.52□□□□□ -0.41
LMNA-222ENST00000508500 AKIRIN2Q53H80 203 aa12.52□□□□□ -0.41
LMNA-222ENST00000508500 ZNF562Q6V9R5 426 aa12.52□□□□□ -0.41
LMNA-222ENST00000508500 LFNGQ8NES3 379 aa12.52□□□□□ -0.41
LMNA-222ENST00000508500 OR4A4PQ8NGN8 299 aa12.52□□□□□ -0.41
LMNA-222ENST00000508500 OR10R2Q8NGX6 335 aa12.52□□□□□ -0.41
LMNA-222ENST00000508500 RAB3CQ96E17 227 aa12.52□□□□□ -0.41
LMNA-222ENST00000508500 WWC2-AS2Q96NR7 200 aa12.52□□□□□ -0.41
LMNA-222ENST00000508500 SDHAF2Q9NX18 166 aa12.52□□□□□ -0.41
LMNA-222ENST00000508500 ZMAT5Q9UDW3 170 aaKnown RBP12.52□□□□□ -0.41
LMNA-222ENST00000508500 ZNF221Q9UK13 617 aa12.52□□□□□ -0.41
LMNA-222ENST00000508500 J3QRK9 145 aa12.51□□□□□ -0.41
LMNA-222ENST00000508500 M0R1X1 148 aa12.51□□□□□ -0.41
LMNA-222ENST00000508500 BET1O15155 118 aa12.51□□□□□ -0.41
LMNA-222ENST00000508500 CRYGBP07316 175 aa12.51□□□□□ -0.41
LMNA-222ENST00000508500 OR8U9P0C7N5 309 aa12.51□□□□□ -0.41
LMNA-222ENST00000508500 PJVKQ0ZLH3 352 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms