RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 TMPRSS5Q9H3S3 457 aa12.05□□□□□ -0.48
DDX41-208ENST00000507955 GNG12Q9UBI6 72 aa12.05□□□□□ -0.48
DDX41-208ENST00000507955 UBE2L5PA0A1B0GUS4 154 aa12.05□□□□□ -0.48
DDX41-208ENST00000507955 HMGB3O15347 200 aaKnown RBP12.05□□□□□ -0.48
DDX41-208ENST00000507955 CYB5R3P00387 301 aaPredicted RBP12.05□□□□□ -0.48
DDX41-208ENST00000507955 IFNA5P01569 189 aa12.05□□□□□ -0.48
DDX41-208ENST00000507955 RD3LP0DJH9 198 aa12.05□□□□□ -0.48
DDX41-208ENST00000507955 KHDC3LQ587J8 217 aa12.05□□□□□ -0.48
DDX41-208ENST00000507955 MEGF10Q96KG7 1140 aa12.05□□□□□ -0.48
DDX41-208ENST00000507955 YLPM1P49750 1951 aaKnown RBP12.04□□□□□ -0.48
DDX41-208ENST00000507955 ZFP92A6NM28 416 aa12.04□□□□□ -0.48
DDX41-208ENST00000507955 DEFA4P12838 97 aa12.04□□□□□ -0.48
DDX41-208ENST00000507955 PYY3Q5JQD4 70 aa12.04□□□□□ -0.48
DDX41-208ENST00000507955 GFI1BQ5VTD9 330 aa12.04□□□□□ -0.48
DDX41-208ENST00000507955 IFNL4K9M1U5 179 aa12.04□□□□□ -0.48
DDX41-208ENST00000507955 SLC31A2O15432 143 aa12.04□□□□□ -0.48
DDX41-208ENST00000507955 HIST1H2BKO60814 126 aa12.04□□□□□ -0.48
DDX41-208ENST00000507955 HIST1H2BJP06899 126 aa12.04□□□□□ -0.48
DDX41-208ENST00000507955 WNT2P09544 360 aa12.04□□□□□ -0.48
DDX41-208ENST00000507955 HIST1H2BOP23527 126 aa12.04□□□□□ -0.48
DDX41-208ENST00000507955 HIST1H2BBP33778 126 aa12.04□□□□□ -0.48
DDX41-208ENST00000507955 HIST1H2BDP58876 126 aa12.04□□□□□ -0.48
DDX41-208ENST00000507955 RAB11AP62491 216 aa12.04□□□□□ -0.48
DDX41-208ENST00000507955 HIST1H2BCP62807 126 aa12.04□□□□□ -0.48
DDX41-208ENST00000507955 NKX6-1P78426 367 aaPredicted RBP12.04□□□□□ -0.48
DDX41-208ENST00000507955 HIST2H2BEQ16778 126 aa12.04□□□□□ -0.48
DDX41-208ENST00000507955 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.04□□□□□ -0.48
DDX41-208ENST00000507955 HIST1H2BHQ93079 126 aa12.04□□□□□ -0.48
DDX41-208ENST00000507955 HIST1H2BNQ99877 126 aa12.04□□□□□ -0.48
DDX41-208ENST00000507955 HIST1H2BMQ99879 126 aa12.04□□□□□ -0.48
DDX41-208ENST00000507955 TOLLIPQ9H0E2 274 aa12.04□□□□□ -0.48
DDX41-208ENST00000507955 TP53TG5Q9Y2B4 290 aa12.04□□□□□ -0.48
DDX41-208ENST00000507955 SVEP1Q4LDE5 3571 aa12.04□□□□□ -0.48
DDX41-208ENST00000507955 HCFC1P51610 2035 aa12.03□□□□□ -0.48
DDX41-208ENST00000507955 TRAV1-1A0A0B4J248 108 aa12.03□□□□□ -0.48
DDX41-208ENST00000507955 CYB5BO43169 146 aa12.03□□□□□ -0.48
DDX41-208ENST00000507955 SPINT2O43291 252 aa12.03□□□□□ -0.48
DDX41-208ENST00000507955 CCKARP32238 428 aa12.03□□□□□ -0.48
DDX41-208ENST00000507955 PRR30Q53SZ7 412 aaPredicted RBP12.03□□□□□ -0.48
DDX41-208ENST00000507955 SLC35E3Q7Z769 313 aa12.03□□□□□ -0.48
DDX41-208ENST00000507955 SCGB1C1Q8TD33 95 aa12.03□□□□□ -0.48
DDX41-208ENST00000507955 LRRC30A6NM36 301 aa12.03□□□□□ -0.48
DDX41-208ENST00000507955 RNF212BA8MTL3 300 aa12.03□□□□□ -0.48
DDX41-208ENST00000507955 A8MXE2 369 aa12.03□□□□□ -0.48
DDX41-208ENST00000507955 FCGR3BO75015 233 aa12.03□□□□□ -0.48
DDX41-208ENST00000507955 DFFBO76075 338 aa12.03□□□□□ -0.48
DDX41-208ENST00000507955 HBE1P02100 147 aa12.03□□□□□ -0.48
DDX41-208ENST00000507955 TRGC2P03986 189 aa12.03□□□□□ -0.48
DDX41-208ENST00000507955 GLRXP35754 106 aa12.03□□□□□ -0.48
DDX41-208ENST00000507955 CD200P41217 278 aa12.03□□□□□ -0.48
DDX41-208ENST00000507955 CDX1P47902 265 aaPredicted RBP12.03□□□□□ -0.48
DDX41-208ENST00000507955 DPPA3Q6W0C5 159 aa12.03□□□□□ -0.48
DDX41-208ENST00000507955 ASCL5Q7RTU5 278 aa12.03□□□□□ -0.48
DDX41-208ENST00000507955 LURAP1Q96LR2 239 aa12.03□□□□□ -0.48
DDX41-208ENST00000507955 SSX3Q99909 188 aa12.03□□□□□ -0.48
DDX41-208ENST00000507955 P0C879 139 aa12.02□□□□□ -0.49
DDX41-208ENST00000507955 S100PP25815 95 aa12.02□□□□□ -0.49
DDX41-208ENST00000507955 MORN2Q502X0 79 aa12.02□□□□□ -0.49
DDX41-208ENST00000507955 PTPRQQ9UMZ3 2332 aa12.02□□□□□ -0.49
DDX41-208ENST00000507955 ATRXP46100 2492 aa12.02□□□□□ -0.49
DDX41-208ENST00000507955 A0A1B0GWJ7 208 aa12.02□□□□□ -0.49
DDX41-208ENST00000507955 MARCH11A6NNE9 402 aa12.02□□□□□ -0.49
DDX41-208ENST00000507955 BCL2P10415 239 aa12.02□□□□□ -0.49
DDX41-208ENST00000507955 SLC38A11Q08AI6 406 aa12.02□□□□□ -0.49
DDX41-208ENST00000507955 CATR1Q13166 79 aa12.02□□□□□ -0.49
DDX41-208ENST00000507955 ZNF787Q6DD87 383 aa12.02□□□□□ -0.49
DDX41-208ENST00000507955 H2BFWTQ7Z2G1 175 aa12.02□□□□□ -0.49
DDX41-208ENST00000507955 DOLPP1Q86YN1 238 aa12.02□□□□□ -0.49
DDX41-208ENST00000507955 CA5BP1Q8WTZ4 195 aa12.02□□□□□ -0.49
DDX41-208ENST00000507955 RCC1LQ96I51 464 aaKnown RBP12.02□□□□□ -0.49
DDX41-208ENST00000507955 ZNRD1Q9P1U0 126 aa12.02□□□□□ -0.49
DDX41-208ENST00000507955 HSPB7Q9UBY9 170 aa12.02□□□□□ -0.49
DDX41-208ENST00000507955 ARFGEF3Q5TH69 2177 aa12.02□□□□□ -0.49
DDX41-208ENST00000507955 CSMD1Q96PZ7 3565 aa12.02□□□□□ -0.49
DDX41-208ENST00000507955 A0A0G2JNJ9 132 aa12.01□□□□□ -0.49
DDX41-208ENST00000507955 IGKV1D-33P01593 117 aa12.01□□□□□ -0.49
DDX41-208ENST00000507955 IGKV1-33P01594 117 aa12.01□□□□□ -0.49
DDX41-208ENST00000507955 OR9G9P0C7N8 305 aa12.01□□□□□ -0.49
DDX41-208ENST00000507955 TIMP3P35625 211 aa12.01□□□□□ -0.49
DDX41-208ENST00000507955 GPR12P47775 334 aa12.01□□□□□ -0.49
DDX41-208ENST00000507955 CCL8P80075 99 aa12.01□□□□□ -0.49
DDX41-208ENST00000507955 FAM57AQ8TBR7 257 aa12.01□□□□□ -0.49
DDX41-208ENST00000507955 Q8TCH9 128 aa12.01□□□□□ -0.49
DDX41-208ENST00000507955 QTRT1Q9BXR0 403 aaKnown RBP12.01□□□□□ -0.49
DDX41-208ENST00000507955 GCM1Q9NP62 436 aa12.01□□□□□ -0.49
DDX41-208ENST00000507955 SIRT7Q9NRC8 400 aa12.01□□□□□ -0.49
DDX41-208ENST00000507955 Q9UFV3 132 aa12.01□□□□□ -0.49
DDX41-208ENST00000507955 SOD3P08294 240 aa12.01□□□□□ -0.49
DDX41-208ENST00000507955 TUBG1P23258 451 aa12.01□□□□□ -0.49
DDX41-208ENST00000507955 LOXL3P58215 753 aa12.01□□□□□ -0.49
DDX41-208ENST00000507955 FOXC1Q12948 553 aa12.01□□□□□ -0.49
DDX41-208ENST00000507955 LRRC75BQ2VPJ9 315 aa12.01□□□□□ -0.49
DDX41-208ENST00000507955 PDZD11Q5EBL8 140 aa12.01□□□□□ -0.49
DDX41-208ENST00000507955 FAM90A1Q86YD7 464 aa12.01□□□□□ -0.49
DDX41-208ENST00000507955 WFDC8Q8IUA0 241 aa12.01□□□□□ -0.49
DDX41-208ENST00000507955 ABHD5Q8WTS1 349 aa12.01□□□□□ -0.49
DDX41-208ENST00000507955 WDR61Q9GZS3 305 aaKnown RBP12.01□□□□□ -0.49
DDX41-208ENST00000507955 TUBG2Q9NRH3 451 aa12.01□□□□□ -0.49
DDX41-208ENST00000507955 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.01□□□□□ -0.49
DDX41-208ENST00000507955 CISD1Q9NZ45 108 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms