RNA–Protein interactions for RNA: ENST00000506842.1

HERC6-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-207ENST00000506842 SOSTQ9BQB4 213 aa3.56□□□□□ -1.84
HERC6-207ENST00000506842 C9orf16Q9BUW7 83 aa3.56□□□□□ -1.84
HERC6-207ENST00000506842 COMMD4Q9H0A8 199 aa3.56□□□□□ -1.84
HERC6-207ENST00000506842 LINC00574Q9H8X3 128 aa3.56□□□□□ -1.84
HERC6-207ENST00000506842 HMG20AQ9NP66 347 aa3.56□□□□□ -1.84
HERC6-207ENST00000506842 BLOC1S6Q9UL45 172 aa3.56□□□□□ -1.84
HERC6-207ENST00000506842 HHLA2Q9UM44 414 aa3.56□□□□□ -1.84
HERC6-207ENST00000506842 RNF24Q9Y225 148 aa3.56□□□□□ -1.84
HERC6-207ENST00000506842 ORC6Q9Y5N6 252 aa3.56□□□□□ -1.84
HERC6-207ENST00000506842 LINC00312Q9Y6C7 94 aa3.56□□□□□ -1.84
HERC6-207ENST00000506842 MINOS1-NBL1R4GNA1 71 aa3.56□□□□□ -1.84
HERC6-207ENST00000506842 TRRAPQ9Y4A5 3859 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 TET2Q6N021 2002 aaPredicted RBP3.55□□□□□ -1.84
HERC6-207ENST00000506842 IGKV1-12A0A0C4DH73 117 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 A0A1B0GU03 582 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 LOC107986453A0A1B0GWG9 222 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 FUOMA2VDF0 154 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 A6NDX4 124 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 TMEM212A6NML5 194 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 LY6LH3BQJ8 138 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 H3BUX3 64 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 J3QLW9 94 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 ANGPTL7O43827 346 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 GPX5O75715 221 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 HAND1O96004 215 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 IGKV1D-12P01611 117 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 IGLV1-47P01700 117 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 HTR1AP08908 422 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 LIMS3P0CW19 117 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 LIMS4P0CW20 117 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 DBTP11182 482 aaKnown RBP3.55□□□□□ -1.84
HERC6-207ENST00000506842 CCL3L1P16619 93 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 ZNF19P17023 458 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 DCKP27707 260 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 POU3F4P49335 361 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 CEBPDP49716 269 aaPredicted RBP3.55□□□□□ -1.84
HERC6-207ENST00000506842 ACTA2P62736 377 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 ACTG2P63267 376 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 BDH1Q02338 343 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 PRB3Q04118 309 aaPredicted RBP3.55□□□□□ -1.84
HERC6-207ENST00000506842 EMX1Q04741 257 aaPredicted RBP3.55□□□□□ -1.84
HERC6-207ENST00000506842 HERPUD1Q15011 391 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 CDK5R1Q15078 307 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 KISS1Q15726 138 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 TMEM41BQ5BJD5 291 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 NHLRC3Q5JS37 347 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 LEMD1Q68G75 181 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 OR52W1Q6IF63 320 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 CCDC121Q6ZUS5 278 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 GDPD3Q7L5L3 318 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 TCF23Q7RTU1 214 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 ERASQ7Z444 233 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 FAM220AQ7Z4H9 259 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 LHFPL3Q86UP9 236 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 DYNAPQ8N1N2 210 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 CBR4Q8N4T8 237 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 CHST4Q8NCG5 386 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 PXT1Q8NFP0 134 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 OR4S1Q8NGB4 309 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 OR51T1Q8NGJ9 327 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 TRMT10AQ8TBZ6 339 aaKnown RBP3.55□□□□□ -1.84
HERC6-207ENST00000506842 ZNF714Q96N38 554 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 OPALINQ96PE5 141 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 TTTY10Q9BZA0 68 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 PPA2Q9H2U2 334 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 PLEKHA1Q9HB21 404 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 NEK6Q9HC98 313 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 FGF20Q9NP95 211 aaPredicted RBP3.55□□□□□ -1.84
HERC6-207ENST00000506842 C8orf4Q9NR00 106 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 TNFRSF19Q9NS68 423 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 IMPAD1Q9NX62 359 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 GLS2Q9UI32 602 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 GNG8Q9UK08 70 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 EXOSC1Q9Y3B2 195 aaKnown RBP3.55□□□□□ -1.84
HERC6-207ENST00000506842 RPL36Q9Y3U8 105 aaKnown RBP3.55□□□□□ -1.84
HERC6-207ENST00000506842 GMPPBQ9Y5P6 360 aa3.55□□□□□ -1.84
HERC6-207ENST00000506842 IGHV2-26A0A0B4J1V2 119 aa3.54□□□□□ -1.84
HERC6-207ENST00000506842 A0A1W2PRD5 423 aa3.54□□□□□ -1.84
HERC6-207ENST00000506842 A0A1W2PRF3 423 aa3.54□□□□□ -1.84
HERC6-207ENST00000506842 A0A1W2PRM7 423 aa3.54□□□□□ -1.84
HERC6-207ENST00000506842 OOSP1A8MZH6 123 aa3.54□□□□□ -1.84
HERC6-207ENST00000506842 WBP4O75554 376 aaKnown RBP3.54□□□□□ -1.84
HERC6-207ENST00000506842 MMP23AO75900 390 aa3.54□□□□□ -1.84
HERC6-207ENST00000506842 OR2H2O95918 312 aa3.54□□□□□ -1.84
HERC6-207ENST00000506842 CYB5AP00167 134 aa3.54□□□□□ -1.84
HERC6-207ENST00000506842 OPN1MWP04001 364 aa3.54□□□□□ -1.84
HERC6-207ENST00000506842 ARG1P05089 322 aa3.54□□□□□ -1.84
HERC6-207ENST00000506842 OPN1MW2P0DN77 364 aa3.54□□□□□ -1.84
HERC6-207ENST00000506842 OPN1MW3P0DN78 364 aa3.54□□□□□ -1.84
HERC6-207ENST00000506842 CALCBP10092 127 aa3.54□□□□□ -1.84
HERC6-207ENST00000506842 CD37P11049 281 aa3.54□□□□□ -1.84
HERC6-207ENST00000506842 GZMHP20718 246 aa3.54□□□□□ -1.84
HERC6-207ENST00000506842 BCL3P20749 454 aa3.54□□□□□ -1.84
HERC6-207ENST00000506842 KCNJ3P48549 501 aa3.54□□□□□ -1.84
HERC6-207ENST00000506842 RAB13P51153 203 aa3.54□□□□□ -1.84
HERC6-207ENST00000506842 DEFA6Q01524 100 aa3.54□□□□□ -1.84
HERC6-207ENST00000506842 GRK1Q15835 563 aa3.54□□□□□ -1.84
HERC6-207ENST00000506842 SSX2Q16385 188 aa3.54□□□□□ -1.84
HERC6-207ENST00000506842 KPRPQ5T749 579 aaPredicted RBP3.54□□□□□ -1.84
HERC6-207ENST00000506842 RPL22L1Q6P5R6 122 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms