RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 Q6ZT83 130 aa1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 MRPL52Q86TS9 123 aaKnown RBP1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 RNF10Q8N5U6 811 aaKnown RBP1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 CCNYL1Q8N7R7 359 aa1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 NECAP1Q8NC96 275 aa1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 PLPP5Q8NEB5 264 aa1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 OR4K17Q8NGC6 315 aa1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 OR5M1Q8NGP8 315 aa1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 OR13G1Q8NGZ3 307 aa1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 ORAOV1Q8WV07 137 aa1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 HGDQ93099 445 aa1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 MAGOHBQ96A72 148 aaKnown RBP1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 STARD4Q96DR4 205 aa1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 MS4A6EQ96DS6 147 aa1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 AIF1LQ9BQI0 150 aa1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 DOHHQ9BU89 302 aa1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 MRPL20Q9BYC9 149 aaKnown RBP1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 SHCBP1LQ9BZQ2 653 aa1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 NXF2Q9GZY0 626 aaKnown RBP1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 PCBD2Q9H0N5 130 aa1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 PLEKHF2Q9H8W4 249 aa1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 TRIM45Q9H8W5 580 aaPredicted RBP1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 IFT46Q9NQC8 304 aa1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 DIABLOQ9NR28 239 aa1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 MS4A12Q9NXJ0 267 aa1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 TAS2R13Q9NYV9 303 aa1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 MMACHCQ9Y4U1 282 aa1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 USH1CQ9Y6N9 552 aa1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 CACNA1CQ13936 2221 aa1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 SVEP1Q4LDE5 3571 aa1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 MYO7BQ6PIF6 2116 aa1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 CPAMD8Q8IZJ3 1885 aa1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 CSPG4Q6UVK1 2322 aa1.99□□□□□ -2.09
TRAPPC11-205ENST00000506426 NCOA6Q14686 2063 aaPredicted RBP1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 DOCK10Q96BY6 2186 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 IGLV4-60A0A075B6I1 120 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 A0A1B0GTI1 187 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 A8MWL6 223 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 PGRMC1O00264 195 aaKnown RBP1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 UBDO15205 165 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 CRXO43186 299 aaPredicted RBP1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 CCNKO75909 580 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 TNFAIP8O95379 198 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 RLN2P04090 185 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 MAS1P04201 325 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 IGKV3-11P04433 115 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 SERPINA6P08185 405 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 SLC35E2BP0CK96 405 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 MLNP12872 115 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 MUC1P15941 1255 aaPredicted RBP1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 TAC1P20366 129 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 HIST1H1TP22492 207 aaPredicted RBP1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 HTR2BP41595 481 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 SLC18A1P54219 525 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 TAS2R43P59537 309 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 SKP1P63208 163 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 SARNPP82979 210 aaKnown RBP1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 RELAQ04206 551 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 PMS2P3Q13401 168 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 TPBGQ13641 420 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 EBPQ15125 230 aaKnown RBP1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 CEACAM16Q2WEN9 425 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 ZNF791Q3KP31 576 aaPredicted RBP1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 ATP6AP1LQ52LC2 224 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 C5orf47Q569G3 176 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 SPANXN3Q5MJ09 141 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 FAM45BPQ6NSW5 357 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 RPS27LQ71UM5 84 aaKnown RBP1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 ZNF550Q7Z398 422 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 CYP4Z1Q86W10 505 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 SPATA24Q86W54 205 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 ZGRF1Q86YA3 2104 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 ZNF695Q8IW36 515 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 ORMDL3Q8N138 153 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 SLC35F6Q8N357 371 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 LRRC25Q8N386 305 aaPredicted RBP1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 SPICQ8N5J4 248 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 TBC1D19Q8N5T2 526 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 SLC25A29Q8N8R3 303 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 ZNF738Q8NE65 137 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 FAM45AQ8TCE6 357 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 ZNF721Q8TF20 911 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 BLNKQ8WV28 456 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 C17orf50Q8WW18 174 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 C22orf15Q8WYQ4 148 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 RNASE6Q93091 150 aaKnown RBP1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 OR10C1Q96KK4 312 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 LINC00167Q96N53 147 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 SPACA5Q96QH8 159 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 HBEGFQ99075 208 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 RNF5Q99942 180 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 MS4A8Q9BY19 250 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 UGT2B28Q9BY64 529 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 DSN1Q9H410 356 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 PROK2Q9HC23 129 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 SIRT7Q9NRC8 400 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 SDHAF3Q9NRP4 125 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 STX18Q9P2W9 335 aaKnown RBP1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 RAB22AQ9UL26 194 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 BOKQ9UMX3 212 aaPredicted RBP1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms