RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 RBFOX2O43251 390 aaKnown RBP eCLIP13.38□□□□□ -0.27
SCLT1-208ENST00000506368 HYPMO75409 117 aa13.38□□□□□ -0.27
SCLT1-208ENST00000506368 PMP22Q01453 160 aa13.38□□□□□ -0.27
SCLT1-208ENST00000506368 HLA-DRB5Q30154 266 aa13.38□□□□□ -0.27
SCLT1-208ENST00000506368 RAET1LQ5VY80 246 aa13.38□□□□□ -0.27
SCLT1-208ENST00000506368 LRP11Q86VZ4 500 aa13.38□□□□□ -0.27
SCLT1-208ENST00000506368 STPG4Q8N801 248 aa13.38□□□□□ -0.27
SCLT1-208ENST00000506368 OR1K1Q8NGR3 316 aa13.38□□□□□ -0.27
SCLT1-208ENST00000506368 RNASE8Q8TDE3 154 aaKnown RBP13.38□□□□□ -0.27
SCLT1-208ENST00000506368 SFXN3Q9BWM7 321 aa13.38□□□□□ -0.27
SCLT1-208ENST00000506368 NCOR1P1Q9H4R4 102 aa13.38□□□□□ -0.27
SCLT1-208ENST00000506368 MTCH1Q9NZJ7 389 aa13.38□□□□□ -0.27
SCLT1-208ENST00000506368 FBXL7Q9UJT9 491 aa13.38□□□□□ -0.27
SCLT1-208ENST00000506368 CXorf1O96002 111 aa13.38□□□□□ -0.27
SCLT1-208ENST00000506368 P0C879 139 aa13.38□□□□□ -0.27
SCLT1-208ENST00000506368 CBLN1P23435 193 aa13.38□□□□□ -0.27
SCLT1-208ENST00000506368 PRRX1P54821 245 aa13.38□□□□□ -0.27
SCLT1-208ENST00000506368 RPEL1Q2QD12 228 aa13.38□□□□□ -0.27
SCLT1-208ENST00000506368 SMIM15Q7Z3B0 74 aa13.38□□□□□ -0.27
SCLT1-208ENST00000506368 APOBEC3DQ96AK3 386 aaPredicted RBP13.38□□□□□ -0.27
SCLT1-208ENST00000506368 WDR83OSQ9Y284 106 aa13.38□□□□□ -0.27
SCLT1-208ENST00000506368 RBM7Q9Y580 266 aaKnown RBP13.38□□□□□ -0.27
SCLT1-208ENST00000506368 PCDH15Q96QU1 1955 aa13.38□□□□□ -0.27
SCLT1-208ENST00000506368 RIF1Q5UIP0 2472 aaKnown RBP13.37□□□□□ -0.27
SCLT1-208ENST00000506368 ZNF292O60281 2723 aa13.37□□□□□ -0.27
SCLT1-208ENST00000506368 IGHV3-15A0A0B4J1V0 119 aa13.37□□□□□ -0.27
SCLT1-208ENST00000506368 ATP5G3P48201 142 aa13.37□□□□□ -0.27
SCLT1-208ENST00000506368 KRTDAPP60985 99 aa13.37□□□□□ -0.27
SCLT1-208ENST00000506368 NHLH1Q02575 133 aa13.37□□□□□ -0.27
SCLT1-208ENST00000506368 TGFBR3Q03167 851 aa13.37□□□□□ -0.27
SCLT1-208ENST00000506368 DEFB133Q30KQ1 61 aa13.37□□□□□ -0.27
SCLT1-208ENST00000506368 PEAR1Q5VY43 1037 aaPredicted RBP13.37□□□□□ -0.27
SCLT1-208ENST00000506368 OR56B2PQ8NGI1 322 aa13.37□□□□□ -0.27
SCLT1-208ENST00000506368 NRN1Q9NPD7 142 aa13.37□□□□□ -0.27
SCLT1-208ENST00000506368 PPP1R3CQ9UQK1 317 aa13.37□□□□□ -0.27
SCLT1-208ENST00000506368 ARL2-SNX15V9GYD0 113 aa13.37□□□□□ -0.27
SCLT1-208ENST00000506368 FER1L5A0AVI2 2057 aa13.37□□□□□ -0.27
SCLT1-208ENST00000506368 OR5B21A6NL26 309 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 MT-CO2P00403 227 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 OR10J4P0C629 311 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 LIFP15018 202 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 B4GALT1P15291 398 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 CATR1Q13166 79 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 WDR31Q8NA23 367 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 C11orf52Q96A22 123 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 ALKBH7Q9BT30 221 aaPredicted RBP13.36□□□□□ -0.27
SCLT1-208ENST00000506368 PLA2G3Q9NZ20 509 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 TBL2Q9Y4P3 447 aaKnown RBP13.36□□□□□ -0.27
SCLT1-208ENST00000506368 IGHV2-70DA0A0C4DH43 119 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 SNURFLB1AK76 121 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 RAB29O14966 203 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 STAG3L2P0CL84 134 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 STAG3L3P0CL85 134 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 CD33P20138 364 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 NXPH1P58417 271 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 RPP30P78346 268 aaKnown RBP13.36□□□□□ -0.27
SCLT1-208ENST00000506368 CFHR1Q03591 330 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 TFF3Q07654 80 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 PLA2G2CQ5R387 149 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 C20orf204Q6ZNR8 217 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 ASCL5Q7RTU5 278 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 AAED1Q7RTV5 226 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 APH1AQ96BI3 265 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 SGCZQ96LD1 299 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 PKIBQ9C010 78 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 KCNIP1Q9NZI2 227 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 KCNS2Q9ULS6 477 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 TNRC6AQ8NDV7 1962 aaKnown RBP13.36□□□□□ -0.27
SCLT1-208ENST00000506368 KIAA1549Q9HCM3 1950 aa13.36□□□□□ -0.27
SCLT1-208ENST00000506368 ADAMTS20P59510 1910 aa13.35□□□□□ -0.27
SCLT1-208ENST00000506368 TRAV24A0A0B4J272 114 aa13.35□□□□□ -0.27
SCLT1-208ENST00000506368 S1PR2O95136 353 aa13.35□□□□□ -0.27
SCLT1-208ENST00000506368 CRYAAP02489 173 aa13.35□□□□□ -0.27
SCLT1-208ENST00000506368 OPRK1P41145 380 aa13.35□□□□□ -0.27
SCLT1-208ENST00000506368 GPM6AP51674 278 aa13.35□□□□□ -0.27
SCLT1-208ENST00000506368 PRSS12P56730 875 aa13.35□□□□□ -0.27
SCLT1-208ENST00000506368 ZNF114Q8NC26 417 aa13.35□□□□□ -0.27
SCLT1-208ENST00000506368 OR1L1Q8NH94 360 aa13.35□□□□□ -0.27
SCLT1-208ENST00000506368 OCC1Q8TAD7 63 aa13.35□□□□□ -0.27
SCLT1-208ENST00000506368 DLL3Q9NYJ7 618 aa13.35□□□□□ -0.27
SCLT1-208ENST00000506368 TRAV30A0A087WSZ9 112 aa13.35□□□□□ -0.27
SCLT1-208ENST00000506368 TRGV10A0A0A0MS01 117 aa13.35□□□□□ -0.27
SCLT1-208ENST00000506368 IGHV2OR16-5A0A0B4J2B6 119 aa13.35□□□□□ -0.27
SCLT1-208ENST00000506368 IGHV1-69-2A0A0G2JMI3 117 aa13.35□□□□□ -0.27
SCLT1-208ENST00000506368 A0A0J9YW62 118 aa13.35□□□□□ -0.27
SCLT1-208ENST00000506368 DPRXA6NFQ7 191 aa13.35□□□□□ -0.27
SCLT1-208ENST00000506368 GLB1P16278 677 aa13.35□□□□□ -0.27
SCLT1-208ENST00000506368 ZNF16P17020 682 aaPredicted RBP13.35□□□□□ -0.27
SCLT1-208ENST00000506368 AMTP48728 403 aa13.35□□□□□ -0.27
SCLT1-208ENST00000506368 HTD2P86397 168 aa13.35□□□□□ -0.27
SCLT1-208ENST00000506368 MRPL21Q7Z2W9 205 aaKnown RBP13.35□□□□□ -0.27
SCLT1-208ENST00000506368 FAM58AQ8N1B3 248 aa13.35□□□□□ -0.27
SCLT1-208ENST00000506368 DRAM1Q8N682 238 aa13.35□□□□□ -0.27
SCLT1-208ENST00000506368 ZNF645Q8N7E2 425 aa13.35□□□□□ -0.27
SCLT1-208ENST00000506368 LOXL4Q96JB6 756 aa13.35□□□□□ -0.27
SCLT1-208ENST00000506368 UHRF2Q96PU4 802 aa13.35□□□□□ -0.27
SCLT1-208ENST00000506368 IGHV2-26A0A0B4J1V2 119 aa13.34□□□□□ -0.27
SCLT1-208ENST00000506368 SIRPB1O00241 398 aa13.34□□□□□ -0.27
SCLT1-208ENST00000506368 HSPB6O14558 160 aa13.34□□□□□ -0.27
SCLT1-208ENST00000506368 ZIC3O60481 467 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms