RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 AP2S1P53680 142 aaPredicted RBP4.78□□□□□ -1.64
SCLT1-207ENST00000506233 PIGPP57054 158 aa4.78□□□□□ -1.64
SCLT1-207ENST00000506233 TEX36Q5VZQ5 186 aa4.78□□□□□ -1.64
SCLT1-207ENST00000506233 LPCAT3Q6P1A2 487 aa4.78□□□□□ -1.64
SCLT1-207ENST00000506233 LINC00596Q86U02 117 aa4.78□□□□□ -1.64
SCLT1-207ENST00000506233 RHOFQ9HBH0 211 aa4.78□□□□□ -1.64
SCLT1-207ENST00000506233 DKK2Q9UBU2 259 aa4.78□□□□□ -1.64
SCLT1-207ENST00000506233 PAIP2BQ9ULR5 123 aaKnown RBP4.78□□□□□ -1.64
SCLT1-207ENST00000506233 CHD8Q9HCK8 2581 aa4.78□□□□□ -1.64
SCLT1-207ENST00000506233 NKX2-6A6NCS4 301 aa4.78□□□□□ -1.64
SCLT1-207ENST00000506233 E7EUB6 86 aa4.78□□□□□ -1.64
SCLT1-207ENST00000506233 J3QT63 122 aa4.78□□□□□ -1.64
SCLT1-207ENST00000506233 MPPED1O15442 326 aa4.78□□□□□ -1.64
SCLT1-207ENST00000506233 IGKV1D-33P01593 117 aa4.78□□□□□ -1.64
SCLT1-207ENST00000506233 IGKV1-33P01594 117 aa4.78□□□□□ -1.64
SCLT1-207ENST00000506233 PSG2P11465 335 aa4.78□□□□□ -1.64
SCLT1-207ENST00000506233 PSMB6P28072 239 aa4.78□□□□□ -1.64
SCLT1-207ENST00000506233 CD34P28906 385 aa4.78□□□□□ -1.64
SCLT1-207ENST00000506233 GPR12P47775 334 aa4.78□□□□□ -1.64
SCLT1-207ENST00000506233 PPT1P50897 306 aa4.78□□□□□ -1.64
SCLT1-207ENST00000506233 CCL20P78556 96 aa4.78□□□□□ -1.64
SCLT1-207ENST00000506233 GAFA1Q96PS6 74 aa4.78□□□□□ -1.64
SCLT1-207ENST00000506233 IFI27L2Q9H2X8 130 aa4.78□□□□□ -1.64
SCLT1-207ENST00000506233 C12orf4Q9NQ89 552 aa4.78□□□□□ -1.64
SCLT1-207ENST00000506233 CTSZQ9UBR2 303 aa4.78□□□□□ -1.64
SCLT1-207ENST00000506233 ERRFI1Q9UJM3 462 aaPredicted RBP4.78□□□□□ -1.64
SCLT1-207ENST00000506233 TLN1Q9Y490 2541 aaKnown RBP4.78□□□□□ -1.64
SCLT1-207ENST00000506233 SSNA1O43805 119 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 IGHV1-46P01743 117 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 SRSF1Q07955 248 aaKnown RBP eCLIP4.77□□□□□ -1.65
SCLT1-207ENST00000506233 C11orf71Q6IPW1 123 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 ZCCHC24Q8N2G6 241 aaKnown RBP4.77□□□□□ -1.65
SCLT1-207ENST00000506233 OR1L1Q8NH94 360 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 TMEM18Q96B42 140 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 GINS3Q9BRX5 216 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 METTL8Q9H825 291 aaKnown RBP4.77□□□□□ -1.65
SCLT1-207ENST00000506233 MEMO1Q9Y316 297 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 TRAV26-1A0A087WT03 109 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 TUBAL3A6NHL2 446 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 SCGNO76038 276 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 GAPDHP04406 335 aaKnown RBP4.77□□□□□ -1.65
SCLT1-207ENST00000506233 SSTR5P35346 364 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 CBX5P45973 191 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 GLIPR1P48060 266 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 RPL7L1Q6DKI1 246 aaKnown RBP4.77□□□□□ -1.65
SCLT1-207ENST00000506233 PVRIGQ6DKI7 326 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 TMEM178AQ8NBL3 297 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 NUP37Q8NFH4 326 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 RITA1Q96K30 269 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 PPA2Q9H2U2 334 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 PLEKHJ1Q9NW61 149 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 KNTC1P50748 2209 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 TRAV17A0A0B4J275 112 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 NXPH3O95157 252 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 ACTBL2Q562R1 376 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 ACOT7LQ6ZUV0 252 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 FAM58AQ8N1B3 248 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 CHST4Q8NCG5 386 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 SCARB1Q8WTV0 552 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 DPF1Q92782 380 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 ZNF479Q96JC4 524 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 PRORYQ9H606 182 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 VSIRQ9H7M9 311 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 B4GALT7Q9UBV7 327 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 DNAH7Q8WXX0 4024 aa4.77□□□□□ -1.65
SCLT1-207ENST00000506233 OR5B21A6NL26 309 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 PPIAL4DF5H284 164 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 PLAUP00749 431 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 CD55P08174 381 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 NHLRC4P0CG21 123 aaPredicted RBP4.76□□□□□ -1.65
SCLT1-207ENST00000506233 NR2C1P13056 603 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 HLA-DRB3P79483 266 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 TIMM23BQ5SRD1 257 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 BHLHA15Q7RTS1 189 aaPredicted RBP4.76□□□□□ -1.65
SCLT1-207ENST00000506233 ZNF546Q86UE3 836 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 DRAM1Q8N682 238 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 TPRX1Q8N7U7 411 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 CSNK2A3Q8NEV1 391 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 OR1S2Q8NGQ3 325 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 RAB39BQ96DA2 213 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 BORCS8Q96FH0 119 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 C2orf50Q96LR7 162 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 SDHAF2Q9NX18 166 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 DMRT1Q9Y5R6 373 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 PTPRQQ9UMZ3 2332 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 C3orf85A0A1B0GTC6 90 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 DEFB108AA8MXU0 73 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 DISC1C4P0D8 188 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 DIRC3C9JPN6 131 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 K7N7A8 449 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 NBR2O15453 112 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 NDUFS6O75380 124 aaKnown RBP4.76□□□□□ -1.65
SCLT1-207ENST00000506233 ZNF44P15621 663 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 PRKACAP17612 351 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 IL32P24001 234 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 GNG3P63215 75 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 DIAPH2-AS1Q14236 149 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 RSU1Q15404 277 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 TAF13Q15543 124 aa4.76□□□□□ -1.65
SCLT1-207ENST00000506233 MRPL23Q16540 153 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms