RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 SMCR5Q8TEV8 140 aa1.18□□□□□ -2.22
TOPBP1-204ENST00000505804 MS4A6EQ96DS6 147 aa1.18□□□□□ -2.22
TOPBP1-204ENST00000505804 NMNAT3Q96T66 252 aa1.18□□□□□ -2.22
TOPBP1-204ENST00000505804 TIPINQ9BVW5 301 aa1.18□□□□□ -2.22
TOPBP1-204ENST00000505804 TTTY13Q9BZ97 58 aa1.18□□□□□ -2.22
TOPBP1-204ENST00000505804 NSRP1Q9H0G5 558 aaKnown RBP1.18□□□□□ -2.22
TOPBP1-204ENST00000505804 POLR3HQ9Y535 204 aaPredicted RBP1.18□□□□□ -2.22
TOPBP1-204ENST00000505804 PCYT1BQ9Y5K3 369 aaPredicted RBP1.18□□□□□ -2.22
TOPBP1-204ENST00000505804 DISP1Q96F81 1524 aa1.18□□□□□ -2.22
TOPBP1-204ENST00000505804 A0A1W2PP64 1363 aa1.18□□□□□ -2.22
TOPBP1-204ENST00000505804 STX10O60499 249 aa1.17□□□□□ -2.22
TOPBP1-204ENST00000505804 PGLYRP1O75594 196 aaPredicted RBP1.17□□□□□ -2.22
TOPBP1-204ENST00000505804 NAPSAO96009 420 aa1.17□□□□□ -2.22
TOPBP1-204ENST00000505804 NPYP01303 97 aa1.17□□□□□ -2.22
TOPBP1-204ENST00000505804 UCHL1P09936 223 aa1.17□□□□□ -2.22
TOPBP1-204ENST00000505804 RPL27AP46776 148 aaKnown RBP1.17□□□□□ -2.22
TOPBP1-204ENST00000505804 MAP3K7CLP57077 242 aa1.17□□□□□ -2.22
TOPBP1-204ENST00000505804 SNAP25P60880 206 aa1.17□□□□□ -2.22
TOPBP1-204ENST00000505804 TMEM258P61165 79 aa1.17□□□□□ -2.22
TOPBP1-204ENST00000505804 FABP5Q01469 135 aa1.17□□□□□ -2.22
TOPBP1-204ENST00000505804 RELAQ04206 551 aa1.17□□□□□ -2.22
TOPBP1-204ENST00000505804 FUNDC1Q8IVP5 155 aa1.17□□□□□ -2.22
TOPBP1-204ENST00000505804 OR7G1Q8NGA0 311 aa1.17□□□□□ -2.22
TOPBP1-204ENST00000505804 OR51T1Q8NGJ9 327 aa1.17□□□□□ -2.22
TOPBP1-204ENST00000505804 ASB17Q8WXJ9 295 aa1.17□□□□□ -2.22
TOPBP1-204ENST00000505804 SFRP2Q96HF1 295 aa1.17□□□□□ -2.22
TOPBP1-204ENST00000505804 NAA38Q9BRA0 125 aaKnown RBP1.17□□□□□ -2.22
TOPBP1-204ENST00000505804 LLPHQ9BRT6 129 aaKnown RBP1.17□□□□□ -2.22
TOPBP1-204ENST00000505804 TAAR3PQ9P1P4 343 aa1.17□□□□□ -2.22
TOPBP1-204ENST00000505804 C15orf41Q9Y2V0 281 aa1.17□□□□□ -2.22
TOPBP1-204ENST00000505804 KLK5Q9Y337 293 aaPredicted RBP1.17□□□□□ -2.22
TOPBP1-204ENST00000505804 CPAMD8Q8IZJ3 1885 aa1.17□□□□□ -2.22
TOPBP1-204ENST00000505804 GRIN2BQ13224 1484 aa1.17□□□□□ -2.22
TOPBP1-204ENST00000505804 MYH11P35749 1972 aa1.16□□□□□ -2.22
TOPBP1-204ENST00000505804 MED13Q9UHV7 2174 aa1.16□□□□□ -2.22
TOPBP1-204ENST00000505804 OR6C6A6NF89 314 aa1.16□□□□□ -2.22
TOPBP1-204ENST00000505804 IL6P05231 212 aa1.16□□□□□ -2.22
TOPBP1-204ENST00000505804 PSMB6P28072 239 aa1.16□□□□□ -2.22
TOPBP1-204ENST00000505804 GLO1Q04760 184 aa1.16□□□□□ -2.22
TOPBP1-204ENST00000505804 CD302Q8IX05 232 aa1.16□□□□□ -2.22
TOPBP1-204ENST00000505804 MNS1Q8NEH6 495 aa1.16□□□□□ -2.22
TOPBP1-204ENST00000505804 OR8B12Q8NGG6 310 aa1.16□□□□□ -2.22
TOPBP1-204ENST00000505804 TMEM109Q9BVC6 243 aa1.16□□□□□ -2.22
TOPBP1-204ENST00000505804 MS4A6AQ9H2W1 248 aa1.16□□□□□ -2.22
TOPBP1-204ENST00000505804 KIAA2026Q5HYC2 2103 aa1.16□□□□□ -2.22
TOPBP1-204ENST00000505804 ZFHX2Q9C0A1 2572 aaPredicted RBP1.15□□□□□ -2.22
TOPBP1-204ENST00000505804 PTPRSQ13332 1948 aa1.15□□□□□ -2.22
TOPBP1-204ENST00000505804 CCDC88CQ9P219 2028 aa1.15□□□□□ -2.22
TOPBP1-204ENST00000505804 A0A087WUU8 490 aa1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 ATP8B1O43520 1251 aa1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 CALUO43852 315 aaPredicted RBP1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 MT-CO2P00403 227 aa1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 HLA-DQB2P05538 268 aa1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 ARL14EPLP0DKL9 152 aa1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 TBPL1P62380 186 aa1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 SKP1P63208 163 aa1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 TPM4P67936 248 aa1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 HLA-DRB3P79483 266 aa1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 COTL1Q14019 142 aa1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 SAPCD1Q5SSQ6 148 aa1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 FAM201AQ5SY85 155 aa1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 OR10K2Q6IF99 312 aa1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 DNM1P34Q6PK57 102 aa1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 FAM9CQ8IZT9 166 aa1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 OR13C8Q8NGS7 320 aa1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 ASB13Q8WXK3 278 aa1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 C12orf43Q96C57 262 aaKnown RBP1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 ZNF514Q96K75 400 aaPredicted RBP1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 DCUN1D5Q9BTE7 237 aa1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 UPF3BQ9BZI7 483 aaKnown RBP1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 SLC22A4Q9H015 551 aa1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 TMEM222Q9H0R3 208 aa1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 HDHD2Q9H0R4 259 aa1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 WDR54Q9H977 334 aa1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 BABAM2Q9NXR7 383 aa1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 EURLQ9NYK6 297 aa1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 TENM1Q9UKZ4 2725 aa1.15□□□□□ -2.23
TOPBP1-204ENST00000505804 FCGBPQ9Y6R7 5405 aaPredicted RBP1.14□□□□□ -2.23
TOPBP1-204ENST00000505804 TMED7-TICAM2A0A0A6YYA0 188 aa1.14□□□□□ -2.23
TOPBP1-204ENST00000505804 TINCRA0A1B0GVN0 87 aa1.14□□□□□ -2.23
TOPBP1-204ENST00000505804 GOLGA6L10A6NI86 522 aa1.14□□□□□ -2.23
TOPBP1-204ENST00000505804 C1QCP02747 245 aa1.14□□□□□ -2.23
TOPBP1-204ENST00000505804 ANGP03950 147 aaKnown RBP1.14□□□□□ -2.23
TOPBP1-204ENST00000505804 TPM3P06753 285 aa1.14□□□□□ -2.23
TOPBP1-204ENST00000505804 ZNF705DP0CH99 300 aaPredicted RBP1.14□□□□□ -2.23
TOPBP1-204ENST00000505804 ZNF705BP0CI00 300 aaPredicted RBP1.14□□□□□ -2.23
TOPBP1-204ENST00000505804 LYNX1P0DP58 116 aa1.14□□□□□ -2.23
TOPBP1-204ENST00000505804 IFNGR2P38484 337 aa1.14□□□□□ -2.23
TOPBP1-204ENST00000505804 CCR2P41597 374 aa1.14□□□□□ -2.23
TOPBP1-204ENST00000505804 CTBP2P56545 445 aa1.14□□□□□ -2.23
TOPBP1-204ENST00000505804 RPS24P62847 133 aaKnown RBP1.14□□□□□ -2.23
TOPBP1-204ENST00000505804 EBPQ15125 230 aaKnown RBP1.14□□□□□ -2.23
TOPBP1-204ENST00000505804 TMEM155Q4W5P6 130 aa1.14□□□□□ -2.23
TOPBP1-204ENST00000505804 SDHAF4Q5VUM1 108 aa1.14□□□□□ -2.23
TOPBP1-204ENST00000505804 FAM19A5Q7Z5A7 132 aaPredicted RBP1.14□□□□□ -2.23
TOPBP1-204ENST00000505804 ZNF675Q8TD23 568 aa1.14□□□□□ -2.23
TOPBP1-204ENST00000505804 ATP6V1DQ9Y5K8 247 aa1.14□□□□□ -2.23
TOPBP1-204ENST00000505804 RAD50Q92878 1312 aa1.14□□□□□ -2.23
TOPBP1-204ENST00000505804 SDK1Q7Z5N4 2213 aa1.13□□□□□ -2.23
TOPBP1-204ENST00000505804 ABCC12Q96J65 1359 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms