RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 PTNP21246 168 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 KDELR2P33947 212 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 PMELP40967 661 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 RAB7AP51149 207 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 ZNF83P51522 516 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 CRISP1P54107 249 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 PSME3P61289 254 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 PPP1CBP62140 327 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 SELENOWP63302 87 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 LIPEQ05469 1076 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 RPL18Q07020 188 aaKnown RBP1.87□□□□□ -2.11
RFC1-209ENST00000504974 PMS2P3Q13401 168 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 MOBPQ13875 183 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 ZNF266Q14584 549 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 TRAM2Q15035 370 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 ZNF726P1Q15940 193 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 GABRA6Q16445 453 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 CLEC12BQ2HXU8 276 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 CEACAM16Q2WEN9 425 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 ARFGEF3Q5TH69 2177 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 VTCN1Q7Z7D3 282 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 CYP4Z1Q86W10 505 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 RBM45Q8IUH3 476 aaKnown RBP1.87□□□□□ -2.11
RFC1-209ENST00000504974 C20orf196Q8IYI0 205 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 ZIC4Q8N9L1 334 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 WDR31Q8NA23 367 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 OR4D11Q8NGI4 311 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 OR8U1Q8NH10 309 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 PFN4Q8NHR9 129 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 LYPD6BQ8NI32 183 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 PIFOQ8TCI5 191 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 C15orf40Q8WUR7 153 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 TMEM239Q8WW34 195 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 TMEM230Q96A57 120 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 MCUR1Q96AQ8 359 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 SGTBQ96EQ0 304 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 OR10C1Q96KK4 312 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 LINC00477Q96M19 166 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 SPIN2AQ99865 258 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 SPIN2BQ9BPZ2 258 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 KCNS3Q9BQ31 491 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 PRSS27Q9BQR3 290 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 WFDC6Q9BQY6 131 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 ULBP2Q9BZM5 246 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 NDEL1Q9GZM8 345 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 EFCAB1Q9HAE3 211 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 NTN4Q9HB63 628 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 CRLF2Q9HC73 371 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 CBLN4Q9NTU7 201 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 MED29Q9NX70 200 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 CMTM6Q9NX76 183 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 ADA2Q9NZK5 511 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 STX18Q9P2W9 335 aaKnown RBP1.87□□□□□ -2.11
RFC1-209ENST00000504974 FBXL3Q9UKT7 428 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 ARL2BPQ9Y2Y0 163 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 MED31Q9Y3C7 131 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 PRKDCP78527 4128 aaKnown RBP1.86□□□□□ -2.11
RFC1-209ENST00000504974 IGHV1-18A0A0C4DH31 117 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 A0A1W2PRG6 482 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 EFCAB9A8MZ26 197 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 ATP6V1G2-DDX39BF2Z307 99 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 TEX46H3BTG2 121 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 H7C417 338 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 M0R3G1 203 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 FFAR1O14842 300 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 BET1O15155 118 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 TCF21O43680 179 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 SHOX2O60902 331 aaPredicted RBP1.86□□□□□ -2.11
RFC1-209ENST00000504974 UBL3O95164 117 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 FARS2O95363 451 aaKnown RBP1.86□□□□□ -2.11
RFC1-209ENST00000504974 RAB36O95755 333 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 IGHMP01871 453 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 ERCC1P07992 297 aaPredicted RBP1.86□□□□□ -2.11
RFC1-209ENST00000504974 SOD3P08294 240 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 TSPAN19P0C672 248 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 CECR9P0C854 216 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 PGA4P0DJD7 388 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 PGA3P0DJD8 388 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 IFI30P13284 250 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 CBR1P16152 277 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 ARR3P36575 388 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 GPR4P46093 362 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 OR1E2P47887 323 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 IDH3GP51553 393 aaPredicted RBP1.86□□□□□ -2.11
RFC1-209ENST00000504974 SMIM11AP58511 58 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 RPS23P62266 143 aaKnown RBP1.86□□□□□ -2.11
RFC1-209ENST00000504974 SNRPD2P62316 118 aaKnown RBP1.86□□□□□ -2.11
RFC1-209ENST00000504974 ACTG1P63261 375 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 PRKCDQ05655 676 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 DGCR6Q14129 220 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 PGGHGQ32M88 737 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 HIKESHIQ53FT3 197 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 SPANXN2Q5MJ10 180 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 C10orf128Q5T292 105 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 GLYATQ6IB77 296 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 ZNF880Q6PDB4 577 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 NTM-AS1Q6ZSK4 140 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 SLC35D2Q76EJ3 337 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 DPPA2Q7Z7J5 298 aa1.86□□□□□ -2.11
RFC1-209ENST00000504974 WDR86Q86TI4 376 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms