RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 TCTEX1D1Q8N7M0 179 aa16.39■□□□□ 0.21
CDC42SE2-206ENST00000503291 CD300LFQ8TDQ1 290 aa16.39■□□□□ 0.21
CDC42SE2-206ENST00000503291 ZNF48Q96MX3 618 aaPredicted RBP16.39■□□□□ 0.21
CDC42SE2-206ENST00000503291 SSX3Q99909 188 aa16.39■□□□□ 0.21
CDC42SE2-206ENST00000503291 SEC22CQ9BRL7 303 aa16.39■□□□□ 0.21
CDC42SE2-206ENST00000503291 IL5P05113 134 aa16.38■□□□□ 0.21
CDC42SE2-206ENST00000503291 RRASP10301 218 aa16.38■□□□□ 0.21
CDC42SE2-206ENST00000503291 ANXA3P12429 323 aa16.38■□□□□ 0.21
CDC42SE2-206ENST00000503291 KIR2DS2P43631 304 aa16.38■□□□□ 0.21
CDC42SE2-206ENST00000503291 PDPNQ86YL7 162 aa16.38■□□□□ 0.21
CDC42SE2-206ENST00000503291 CASTOR1Q8WTX7 329 aa16.38■□□□□ 0.21
CDC42SE2-206ENST00000503291 TMEM222Q9H0R3 208 aa16.38■□□□□ 0.21
CDC42SE2-206ENST00000503291 PRR13Q9NZ81 148 aa16.38■□□□□ 0.21
CDC42SE2-206ENST00000503291 FAM90A9PA6NNJ1 464 aa16.38■□□□□ 0.21
CDC42SE2-206ENST00000503291 RBFOX2O43251 390 aaKnown RBP eCLIP16.38■□□□□ 0.21
CDC42SE2-206ENST00000503291 B3GALNT1O75752 331 aa16.38■□□□□ 0.21
CDC42SE2-206ENST00000503291 CRYZL1O95825 349 aa16.38■□□□□ 0.21
CDC42SE2-206ENST00000503291 SERPINE2P07093 398 aa16.38■□□□□ 0.21
CDC42SE2-206ENST00000503291 SNRNP70P08621 437 aaKnown RBP16.38■□□□□ 0.21
CDC42SE2-206ENST00000503291 UCP1P25874 307 aa16.38■□□□□ 0.21
CDC42SE2-206ENST00000503291 DYNLT3P51808 116 aa16.38■□□□□ 0.21
CDC42SE2-206ENST00000503291 PIFOQ8TCI5 191 aa16.38■□□□□ 0.21
CDC42SE2-206ENST00000503291 ZDHHC16Q969W1 377 aa16.38■□□□□ 0.21
CDC42SE2-206ENST00000503291 PRAF2O60831 178 aa16.37■□□□□ 0.21
CDC42SE2-206ENST00000503291 IGKV1D-33P01593 117 aa16.37■□□□□ 0.21
CDC42SE2-206ENST00000503291 IGKV1-33P01594 117 aa16.37■□□□□ 0.21
CDC42SE2-206ENST00000503291 SRD5A1P18405 259 aa16.37■□□□□ 0.21
CDC42SE2-206ENST00000503291 LPAR6P43657 344 aa16.37■□□□□ 0.21
CDC42SE2-206ENST00000503291 TMEM187Q14656 261 aa16.37■□□□□ 0.21
CDC42SE2-206ENST00000503291 TATDN3Q17R31 274 aa16.37■□□□□ 0.21
CDC42SE2-206ENST00000503291 LRRC75BQ2VPJ9 315 aa16.37■□□□□ 0.21
CDC42SE2-206ENST00000503291 OR4S2Q8NH73 311 aa16.37■□□□□ 0.21
CDC42SE2-206ENST00000503291 FLYWCH2Q96CP2 140 aaKnown RBP16.37■□□□□ 0.21
CDC42SE2-206ENST00000503291 PRDM13Q9H4Q3 707 aa16.37■□□□□ 0.21
CDC42SE2-206ENST00000503291 FAM212BQ9NTI7 297 aaPredicted RBP16.37■□□□□ 0.21
CDC42SE2-206ENST00000503291 NSD1Q96L73 2696 aaPredicted RBP16.37■□□□□ 0.21
CDC42SE2-206ENST00000503291 A0A0B4J293 547 aa16.36■□□□□ 0.21
CDC42SE2-206ENST00000503291 CBX3Q13185 183 aa16.36■□□□□ 0.21
CDC42SE2-206ENST00000503291 HES1Q14469 280 aa16.36■□□□□ 0.21
CDC42SE2-206ENST00000503291 AANATQ16613 207 aa16.36■□□□□ 0.21
CDC42SE2-206ENST00000503291 TUSC1Q2TAM9 212 aa16.36■□□□□ 0.21
CDC42SE2-206ENST00000503291 OR4C13Q8NGP0 309 aa16.36■□□□□ 0.21
CDC42SE2-206ENST00000503291 RITA1Q96K30 269 aa16.36■□□□□ 0.21
CDC42SE2-206ENST00000503291 DUS4LO95620 317 aaKnown RBP16.36■□□□□ 0.21
CDC42SE2-206ENST00000503291 CDS2O95674 445 aa16.36■□□□□ 0.21
CDC42SE2-206ENST00000503291 HPRT1P00492 218 aa16.36■□□□□ 0.21
CDC42SE2-206ENST00000503291 FAM106CPP0CH98 169 aa16.36■□□□□ 0.21
CDC42SE2-206ENST00000503291 HNF4GQ14541 408 aa16.36■□□□□ 0.21
CDC42SE2-206ENST00000503291 ANKRD55Q3KP44 614 aa16.36■□□□□ 0.21
CDC42SE2-206ENST00000503291 FBLN7Q53RD9 439 aa16.36■□□□□ 0.21
CDC42SE2-206ENST00000503291 DHRS7BQ6IAN0 325 aaPredicted RBP16.36■□□□□ 0.21
CDC42SE2-206ENST00000503291 Q6YL49 198 aa16.36■□□□□ 0.21
CDC42SE2-206ENST00000503291 THNSL2Q86YJ6 484 aa16.36■□□□□ 0.21
CDC42SE2-206ENST00000503291 ZNF431Q8TF32 576 aaPredicted RBP16.36■□□□□ 0.21
CDC42SE2-206ENST00000503291 GPN1Q9HCN4 374 aaPredicted RBP16.36■□□□□ 0.21
CDC42SE2-206ENST00000503291 S1PR2O95136 353 aa16.35■□□□□ 0.21
CDC42SE2-206ENST00000503291 MOSP00540 346 aa16.35■□□□□ 0.21
CDC42SE2-206ENST00000503291 EBI3Q14213 229 aa16.35■□□□□ 0.21
CDC42SE2-206ENST00000503291 TMEM177Q53S58 311 aa16.35■□□□□ 0.21
CDC42SE2-206ENST00000503291 LIAT1Q6ZQX7 453 aa16.35■□□□□ 0.21
CDC42SE2-206ENST00000503291 OR2T10Q8NGZ9 312 aa16.35■□□□□ 0.21
CDC42SE2-206ENST00000503291 LHFPL5Q8TAF8 219 aa16.35■□□□□ 0.21
CDC42SE2-206ENST00000503291 EAF1Q96JC9 268 aaPredicted RBP16.35■□□□□ 0.21
CDC42SE2-206ENST00000503291 PLEKHA2Q9HB19 425 aa16.35■□□□□ 0.21
CDC42SE2-206ENST00000503291 A0A0A6YYJ9 748 aa16.35■□□□□ 0.21
CDC42SE2-206ENST00000503291 H3BUX3 64 aa16.35■□□□□ 0.21
CDC42SE2-206ENST00000503291 RPS16P62249 146 aaKnown RBP16.35■□□□□ 0.21
CDC42SE2-206ENST00000503291 SCGB2A2Q13296 93 aa16.35■□□□□ 0.21
CDC42SE2-206ENST00000503291 SHOXO15266 292 aa16.34■□□□□ 0.21
CDC42SE2-206ENST00000503291 IGKV1-39P01597 117 aa16.34■□□□□ 0.21
CDC42SE2-206ENST00000503291 IGKV1D-39P04432 117 aa16.34■□□□□ 0.21
CDC42SE2-206ENST00000503291 RPA2P15927 270 aa16.34■□□□□ 0.21
CDC42SE2-206ENST00000503291 IER3P46695 156 aa16.34■□□□□ 0.21
CDC42SE2-206ENST00000503291 SIGLECL1Q8N7X8 197 aa16.34■□□□□ 0.21
CDC42SE2-206ENST00000503291 OSR1Q8TAX0 266 aaPredicted RBP16.34■□□□□ 0.21
CDC42SE2-206ENST00000503291 MITD1Q8WV92 249 aa16.34■□□□□ 0.21
CDC42SE2-206ENST00000503291 TMEM56Q96MV1 263 aa16.34■□□□□ 0.21
CDC42SE2-206ENST00000503291 TMEM56-RWDD3S4R434 201 aa16.34■□□□□ 0.21
CDC42SE2-206ENST00000503291 SRRM4A7MD48 611 aaKnown RBP16.33■□□□□ 0.21
CDC42SE2-206ENST00000503291 SNRPGP15A8MWD9 76 aa16.33■□□□□ 0.21
CDC42SE2-206ENST00000503291 IGHV4-59P01825 116 aa16.33■□□□□ 0.21
CDC42SE2-206ENST00000503291 TMEM268Q5VZI3 342 aa16.33■□□□□ 0.21
CDC42SE2-206ENST00000503291 LIN54Q6MZP7 749 aa16.33■□□□□ 0.21
CDC42SE2-206ENST00000503291 ZNF695Q8IW36 515 aa16.33■□□□□ 0.21
CDC42SE2-206ENST00000503291 LGI3Q8N145 548 aa16.33■□□□□ 0.21
CDC42SE2-206ENST00000503291 HARBI1Q96MB7 349 aa16.33■□□□□ 0.21
CDC42SE2-206ENST00000503291 ALG5Q9Y673 324 aa16.33■□□□□ 0.21
CDC42SE2-206ENST00000503291 C7orf66A4D0T2 115 aa16.33■□□□□ 0.2
CDC42SE2-206ENST00000503291 CREBL2O60519 120 aaPredicted RBP16.33■□□□□ 0.2
CDC42SE2-206ENST00000503291 SELENOHQ8IZQ5 122 aaKnown RBP16.33■□□□□ 0.2
CDC42SE2-206ENST00000503291 VKORC1L1Q8N0U8 176 aa16.33■□□□□ 0.2
CDC42SE2-206ENST00000503291 RBPMSQ93062 196 aaKnown RBP16.33■□□□□ 0.2
CDC42SE2-206ENST00000503291 PHB2Q99623 299 aa16.33■□□□□ 0.2
CDC42SE2-206ENST00000503291 FN1P02751 2386 aaKnown RBP16.32■□□□□ 0.2
CDC42SE2-206ENST00000503291 KRASP01116 189 aa16.32■□□□□ 0.2
CDC42SE2-206ENST00000503291 TMEM11P17152 192 aa16.32■□□□□ 0.2
CDC42SE2-206ENST00000503291 LGALS7P47929 136 aa16.32■□□□□ 0.2
CDC42SE2-206ENST00000503291 SRPXP78539 464 aa16.32■□□□□ 0.2
CDC42SE2-206ENST00000503291 Q6ZNX1 250 aa16.32■□□□□ 0.2
CDC42SE2-206ENST00000503291 Q8N6K4 173 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms