RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 LINC00311Q8N616 119 aa18.03■□□□□ 0.48
PTPN13-205ENST00000502971 OR8B3Q8NGG8 313 aa18.03■□□□□ 0.48
PTPN13-205ENST00000502971 ZNF596Q8TC21 504 aa18.03■□□□□ 0.48
PTPN13-205ENST00000502971 OR8B2Q96RD0 313 aa18.03■□□□□ 0.48
PTPN13-205ENST00000502971 CHODLQ9H9P2 273 aa18.03■□□□□ 0.48
PTPN13-205ENST00000502971 UBTD1Q9HAC8 227 aa18.03■□□□□ 0.48
PTPN13-205ENST00000502971 USF3Q68DE3 2245 aa18.03■□□□□ 0.48
PTPN13-205ENST00000502971 A0A1W2PPH5 198 aa18.02■□□□□ 0.48
PTPN13-205ENST00000502971 FGF16O43320 207 aa18.02■□□□□ 0.48
PTPN13-205ENST00000502971 TXNL1O43396 289 aa18.02■□□□□ 0.48
PTPN13-205ENST00000502971 NQO2P16083 231 aa18.02■□□□□ 0.48
PTPN13-205ENST00000502971 UBE2KP61086 200 aa18.02■□□□□ 0.48
PTPN13-205ENST00000502971 ERVK-16P61578 105 aa18.02■□□□□ 0.48
PTPN13-205ENST00000502971 NEIL1Q96FI4 390 aaPredicted RBP18.02■□□□□ 0.48
PTPN13-205ENST00000502971 PSENENQ9NZ42 101 aa18.02■□□□□ 0.48
PTPN13-205ENST00000502971 PPIHO43447 177 aaKnown RBP18.01■□□□□ 0.47
PTPN13-205ENST00000502971 LY6HO94772 140 aa18.01■□□□□ 0.47
PTPN13-205ENST00000502971 ZNF266Q14584 549 aa18.01■□□□□ 0.47
PTPN13-205ENST00000502971 ZNF833PQ6ZTB9 187 aa18.01■□□□□ 0.47
PTPN13-205ENST00000502971 STX12Q86Y82 276 aa18.01■□□□□ 0.47
PTPN13-205ENST00000502971 ZNF383Q8NA42 475 aa18.01■□□□□ 0.47
PTPN13-205ENST00000502971 GINS3Q9BRX5 216 aa18.01■□□□□ 0.47
PTPN13-205ENST00000502971 ABCA4P78363 2273 aa18.01■□□□□ 0.47
PTPN13-205ENST00000502971 IGHV1-8P0DP01 117 aa18.01■□□□□ 0.47
PTPN13-205ENST00000502971 FAM71F2Q6NXP2 309 aa18.01■□□□□ 0.47
PTPN13-205ENST00000502971 C8orf46Q8TAG6 207 aa18.01■□□□□ 0.47
PTPN13-205ENST00000502971 RBKSQ9H477 322 aa18.01■□□□□ 0.47
PTPN13-205ENST00000502971 FAM157CP0CG43 387 aa18■□□□□ 0.47
PTPN13-205ENST00000502971 RNF224P0DH78 156 aa18■□□□□ 0.47
PTPN13-205ENST00000502971 IAPPP10997 89 aa18■□□□□ 0.47
PTPN13-205ENST00000502971 SULT1A1P50225 295 aa18■□□□□ 0.47
PTPN13-205ENST00000502971 SESN1Q9Y6P5 492 aa18■□□□□ 0.47
PTPN13-205ENST00000502971 YLPM1P49750 1951 aaKnown RBP17.99■□□□□ 0.47
PTPN13-205ENST00000502971 J3QR06 171 aa17.99■□□□□ 0.47
PTPN13-205ENST00000502971 CT45A6P0DMU7 189 aa17.99■□□□□ 0.47
PTPN13-205ENST00000502971 CT45A5P0DMU8 189 aa17.99■□□□□ 0.47
PTPN13-205ENST00000502971 CT45A7P0DMV0 189 aa17.99■□□□□ 0.47
PTPN13-205ENST00000502971 DYNLT3P51808 116 aa17.99■□□□□ 0.47
PTPN13-205ENST00000502971 AARDQ4LEZ3 155 aa17.99■□□□□ 0.47
PTPN13-205ENST00000502971 WDR25Q64LD2 544 aaPredicted RBP17.99■□□□□ 0.47
PTPN13-205ENST00000502971 C11orf42Q8N5U0 333 aa17.99■□□□□ 0.47
PTPN13-205ENST00000502971 OR5C1Q8NGR4 320 aa17.99■□□□□ 0.47
PTPN13-205ENST00000502971 OR9G1Q8NH87 305 aa17.99■□□□□ 0.47
PTPN13-205ENST00000502971 SPOCK3Q9BQ16 436 aa17.99■□□□□ 0.47
PTPN13-205ENST00000502971 BARX1Q9HBU1 254 aaPredicted RBP17.99■□□□□ 0.47
PTPN13-205ENST00000502971 CACFD1Q9UGQ2 172 aa17.99■□□□□ 0.47
PTPN13-205ENST00000502971 HELZ2Q9BYK8 2649 aaKnown RBP17.99■□□□□ 0.47
PTPN13-205ENST00000502971 CST7O76096 145 aa17.98■□□□□ 0.47
PTPN13-205ENST00000502971 F12P00748 615 aaPredicted RBP17.98■□□□□ 0.47
PTPN13-205ENST00000502971 RBP4P02753 201 aa17.98■□□□□ 0.47
PTPN13-205ENST00000502971 SEC11BP0C7V7 166 aa17.98■□□□□ 0.47
PTPN13-205ENST00000502971 DHRS7BQ6IAN0 325 aaPredicted RBP17.98■□□□□ 0.47
PTPN13-205ENST00000502971 OR1S2Q8NGQ3 325 aa17.98■□□□□ 0.47
PTPN13-205ENST00000502971 TMEM186Q96B77 213 aa17.98■□□□□ 0.47
PTPN13-205ENST00000502971 REG4Q9BYZ8 158 aa17.98■□□□□ 0.47
PTPN13-205ENST00000502971 MFSD2BA6NFX1 497 aa17.98■□□□□ 0.47
PTPN13-205ENST00000502971 RBMXL2O75526 392 aaKnown RBP17.98■□□□□ 0.47
PTPN13-205ENST00000502971 TAGLNQ01995 201 aaKnown RBP17.98■□□□□ 0.47
PTPN13-205ENST00000502971 CLINT1Q14677 625 aa17.98■□□□□ 0.47
PTPN13-205ENST00000502971 AANATQ16613 207 aa17.98■□□□□ 0.47
PTPN13-205ENST00000502971 RTL8BQ17RB0 113 aa17.98■□□□□ 0.47
PTPN13-205ENST00000502971 OR10X1Q8NGY0 326 aa17.98■□□□□ 0.47
PTPN13-205ENST00000502971 CIB3Q96Q77 187 aaPredicted RBP17.98■□□□□ 0.47
PTPN13-205ENST00000502971 TMEM133Q9H2Q1 129 aa17.98■□□□□ 0.47
PTPN13-205ENST00000502971 ZNRD1Q9P1U0 126 aa17.98■□□□□ 0.47
PTPN13-205ENST00000502971 H3BP45 60 aa17.97■□□□□ 0.47
PTPN13-205ENST00000502971 FBXO24O75426 580 aa17.97■□□□□ 0.47
PTPN13-205ENST00000502971 CRYZL1O95825 349 aa17.97■□□□□ 0.47
PTPN13-205ENST00000502971 OR9G9P0C7N8 305 aa17.97■□□□□ 0.47
PTPN13-205ENST00000502971 CDKN1AP38936 164 aa17.97■□□□□ 0.47
PTPN13-205ENST00000502971 SULT1A2P50226 295 aa17.97■□□□□ 0.47
PTPN13-205ENST00000502971 OR4A16Q8NH70 328 aa17.97■□□□□ 0.47
PTPN13-205ENST00000502971 TNFRSF14Q92956 283 aa17.97■□□□□ 0.47
PTPN13-205ENST00000502971 SAT2Q96F10 170 aaPredicted RBP17.97■□□□□ 0.47
PTPN13-205ENST00000502971 PATZ1Q9HBE1 687 aaKnown RBP17.97■□□□□ 0.47
PTPN13-205ENST00000502971 PPIAL4CA0A0B4J2A2 164 aa17.96■□□□□ 0.47
PTPN13-205ENST00000502971 DFFBO76075 338 aa17.96■□□□□ 0.47
PTPN13-205ENST00000502971 LY86O95711 162 aa17.96■□□□□ 0.47
PTPN13-205ENST00000502971 HRASP01112 189 aa17.96■□□□□ 0.47
PTPN13-205ENST00000502971 PPIAL4GP0DN37 164 aa17.96■□□□□ 0.47
PTPN13-205ENST00000502971 SPP1P10451 314 aa17.96■□□□□ 0.47
PTPN13-205ENST00000502971 ZNF137PP52743 207 aa17.96■□□□□ 0.47
PTPN13-205ENST00000502971 POU2AF1Q16633 256 aa17.96■□□□□ 0.47
PTPN13-205ENST00000502971 SSX9Q7RTT3 188 aa17.96■□□□□ 0.47
PTPN13-205ENST00000502971 ABHD12Q8N2K0 398 aa17.96■□□□□ 0.47
PTPN13-205ENST00000502971 STPG2Q8N412 459 aa17.96■□□□□ 0.47
PTPN13-205ENST00000502971 TMEM217Q8N7C4 229 aa17.96■□□□□ 0.47
PTPN13-205ENST00000502971 OR52E5Q8NH55 327 aa17.96■□□□□ 0.47
PTPN13-205ENST00000502971 ATP5SQ99766 215 aa17.96■□□□□ 0.47
PTPN13-205ENST00000502971 SLC35D1Q9NTN3 355 aa17.96■□□□□ 0.47
PTPN13-205ENST00000502971 TMEM140Q9NV12 185 aa17.96■□□□□ 0.47
PTPN13-205ENST00000502971 EFNA4P52798 201 aa17.95■□□□□ 0.46
PTPN13-205ENST00000502971 TMEM267Q0VDI3 215 aaPredicted RBP17.95■□□□□ 0.46
PTPN13-205ENST00000502971 HSD17B13Q7Z5P4 300 aaPredicted RBP17.95■□□□□ 0.46
PTPN13-205ENST00000502971 EIF4E3Q8N5X7 224 aaKnown RBP17.95■□□□□ 0.46
PTPN13-205ENST00000502971 LY6G5BQ8NDX9 201 aa17.95■□□□□ 0.46
PTPN13-205ENST00000502971 DTD1Q8TEA8 209 aa17.95■□□□□ 0.46
PTPN13-205ENST00000502971 QTRT1Q9BXR0 403 aaKnown RBP17.95■□□□□ 0.46
PTPN13-205ENST00000502971 ZNF705EA8MWA4 302 aaPredicted RBP17.95■□□□□ 0.46
PTPN13-205ENST00000502971 SPANXN5Q5MJ07 72 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms