RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 CLEC19AQ6UXS0 136 aa6.78□□□□□ -1.32
CCDC171-209ENST00000498725 WFDC3Q8IUB2 231 aa6.78□□□□□ -1.32
CCDC171-209ENST00000498725 RHOXF1Q8NHV9 184 aa6.78□□□□□ -1.32
CCDC171-209ENST00000498725 SRSF12Q8WXF0 261 aaKnown RBP6.78□□□□□ -1.32
CCDC171-209ENST00000498725 EXOSC1Q9Y3B2 195 aaKnown RBP6.78□□□□□ -1.32
CCDC171-209ENST00000498725 RPL36Q9Y3U8 105 aaKnown RBP6.78□□□□□ -1.32
CCDC171-209ENST00000498725 TRBV5-7A0A0A0MS05 114 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 HMX3A6NHT5 357 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 ITGB1BP1O14713 200 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 NAPSAO96009 420 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 CD3GP09693 182 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 FCGR2BP31994 310 aaPredicted RBP6.77□□□□□ -1.33
CCDC171-209ENST00000498725 ARL3P36405 182 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 MRGPRG-AS1Q2M3A8 158 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 ANKRD55Q3KP44 614 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 YIF1BQ5BJH7 314 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 C10orf55Q5SWW7 151 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 ZNF880Q6PDB4 577 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 RBPMS2Q6ZRY4 209 aaKnown RBP6.77□□□□□ -1.33
CCDC171-209ENST00000498725 Q6ZWC4 215 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 MOB1BQ7L9L4 216 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 TMEM217Q8N7C4 229 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 STPG3Q8N7X2 389 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 OR1L6Q8NGR2 347 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 FBLIM1Q8WUP2 373 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 PYDC1Q8WXC3 89 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 GGHQ92820 318 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 TMEM59Q9BXS4 323 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 OR2D2Q9H210 308 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 FGF20Q9NP95 211 aaPredicted RBP6.77□□□□□ -1.33
CCDC171-209ENST00000498725 PLEKHJ1Q9NW61 149 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 BABAM2Q9NXR7 383 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 RDH8Q9NYR8 311 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 CLEC2DQ9UHP7 191 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 AK3Q9UIJ7 227 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 FBXL7Q9UJT9 491 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 TP53TG1Q9Y2A0 90 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 DMRT1Q9Y5R6 373 aa6.77□□□□□ -1.33
CCDC171-209ENST00000498725 A0A0A6YYD4 124 aa6.76□□□□□ -1.33
CCDC171-209ENST00000498725 TRBV9A0A0B4J1U6 114 aa6.76□□□□□ -1.33
CCDC171-209ENST00000498725 IGHV3-35A0A0C4DH35 117 aa6.76□□□□□ -1.33
CCDC171-209ENST00000498725 TMEM213A2RRL7 107 aa6.76□□□□□ -1.33
CCDC171-209ENST00000498725 LGALS9O00182 355 aa6.76□□□□□ -1.33
CCDC171-209ENST00000498725 BET1O15155 118 aa6.76□□□□□ -1.33
CCDC171-209ENST00000498725 CRYZL1O95825 349 aa6.76□□□□□ -1.33
CCDC171-209ENST00000498725 IFNA4P05014 189 aa6.76□□□□□ -1.33
CCDC171-209ENST00000498725 CTRB1P17538 263 aa6.76□□□□□ -1.33
CCDC171-209ENST00000498725 RPS27AP62979 156 aaKnown RBP6.76□□□□□ -1.33
CCDC171-209ENST00000498725 RBMS2Q15434 407 aaKnown RBP6.76□□□□□ -1.33
CCDC171-209ENST00000498725 PRSS8Q16651 343 aa6.76□□□□□ -1.33
CCDC171-209ENST00000498725 RTL8BQ17RB0 113 aa6.76□□□□□ -1.33
CCDC171-209ENST00000498725 VMA21Q3ZAQ7 101 aa6.76□□□□□ -1.33
CCDC171-209ENST00000498725 FAM106AQ4KMX7 169 aa6.76□□□□□ -1.33
CCDC171-209ENST00000498725 ZNF585BQ52M93 769 aa6.76□□□□□ -1.33
CCDC171-209ENST00000498725 CTRB2Q6GPI1 263 aa6.76□□□□□ -1.33
CCDC171-209ENST00000498725 CBR4Q8N4T8 237 aa6.76□□□□□ -1.33
CCDC171-209ENST00000498725 NECAP1Q8NC96 275 aa6.76□□□□□ -1.33
CCDC171-209ENST00000498725 OR5B3Q8NH48 314 aa6.76□□□□□ -1.33
CCDC171-209ENST00000498725 APH1BQ8WW43 257 aa6.76□□□□□ -1.33
CCDC171-209ENST00000498725 RNF183Q96D59 192 aa6.76□□□□□ -1.33
CCDC171-209ENST00000498725 DERL3Q96Q80 235 aa6.76□□□□□ -1.33
CCDC171-209ENST00000498725 RYR1P21817 5038 aa6.76□□□□□ -1.33
CCDC171-209ENST00000498725 MUC4Q99102 2169 aa6.75□□□□□ -1.33
CCDC171-209ENST00000498725 IGKV1-6A0A0C4DH72 117 aa6.75□□□□□ -1.33
CCDC171-209ENST00000498725 DPPA5A6NC42 116 aa6.75□□□□□ -1.33
CCDC171-209ENST00000498725 IGLL5B9A064 214 aa6.75□□□□□ -1.33
CCDC171-209ENST00000498725 DEFB4AO15263 64 aa6.75□□□□□ -1.33
CCDC171-209ENST00000498725 SOCS1O15524 211 aa6.75□□□□□ -1.33
CCDC171-209ENST00000498725 ACTL6BO94805 426 aa6.75□□□□□ -1.33
CCDC171-209ENST00000498725 S1PR2O95136 353 aa6.75□□□□□ -1.33
CCDC171-209ENST00000498725 MYL12AP19105 171 aa6.75□□□□□ -1.33
CCDC171-209ENST00000498725 TMEM177Q53S58 311 aa6.75□□□□□ -1.33
CCDC171-209ENST00000498725 CDH26Q8IXH8 852 aa6.75□□□□□ -1.33
CCDC171-209ENST00000498725 SLC38A6Q8IZM9 456 aa6.75□□□□□ -1.33
CCDC171-209ENST00000498725 OR2C3Q8N628 320 aa6.75□□□□□ -1.33
CCDC171-209ENST00000498725 PTX4Q96A99 478 aa6.75□□□□□ -1.33
CCDC171-209ENST00000498725 C5orf30Q96GV9 206 aa6.75□□□□□ -1.33
CCDC171-209ENST00000498725 PGLYRP3Q96LB9 341 aa6.75□□□□□ -1.33
CCDC171-209ENST00000498725 SLC29A1Q99808 456 aa6.75□□□□□ -1.33
CCDC171-209ENST00000498725 DCUN1D5Q9BTE7 237 aa6.75□□□□□ -1.33
CCDC171-209ENST00000498725 KRTAP4-5Q9BYR2 181 aa6.75□□□□□ -1.33
CCDC171-209ENST00000498725 ZNF430Q9H8G1 570 aaPredicted RBP6.75□□□□□ -1.33
CCDC171-209ENST00000498725 MRPS18AQ9NVS2 196 aaKnown RBP6.75□□□□□ -1.33
CCDC171-209ENST00000498725 SDHAF2Q9NX18 166 aa6.75□□□□□ -1.33
CCDC171-209ENST00000498725 RBM7Q9Y580 266 aaKnown RBP6.75□□□□□ -1.33
CCDC171-209ENST00000498725 LOC100130705A0A1B0GUX0 176 aa6.74□□□□□ -1.33
CCDC171-209ENST00000498725 J3QRK9 145 aa6.74□□□□□ -1.33
CCDC171-209ENST00000498725 UBE2CO00762 179 aa6.74□□□□□ -1.33
CCDC171-209ENST00000498725 MED14OSP0DP75 135 aa6.74□□□□□ -1.33
CCDC171-209ENST00000498725 DCKP27707 260 aa6.74□□□□□ -1.33
CCDC171-209ENST00000498725 UBE2KP61086 200 aa6.74□□□□□ -1.33
CCDC171-209ENST00000498725 UNC119Q13432 240 aa6.74□□□□□ -1.33
CCDC171-209ENST00000498725 INSL4Q14641 139 aa6.74□□□□□ -1.33
CCDC171-209ENST00000498725 OR2B11Q5JQS5 317 aa6.74□□□□□ -1.33
CCDC171-209ENST00000498725 XP32Q5T750 250 aa6.74□□□□□ -1.33
CCDC171-209ENST00000498725 UNQ9165/PRO28630Q6UXU0 137 aa6.74□□□□□ -1.33
CCDC171-209ENST00000498725 CEACAM19Q7Z692 300 aa6.74□□□□□ -1.33
CCDC171-209ENST00000498725 GPHB5Q86YW7 130 aa6.74□□□□□ -1.33
CCDC171-209ENST00000498725 TTC9CQ8N5M4 171 aa6.74□□□□□ -1.33
CCDC171-209ENST00000498725 NKAIN3Q8N8D7 197 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms