RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 RPL39P5Q59GN2 51 aa6.91□□□□□ -1.3
SF3A1-210ENST00000498259 MINOS1Q5TGZ0 78 aa6.91□□□□□ -1.3
SF3A1-210ENST00000498259 STX12Q86Y82 276 aa6.91□□□□□ -1.3
SF3A1-210ENST00000498259 OR11H4Q8NGC9 324 aa6.91□□□□□ -1.3
SF3A1-210ENST00000498259 OR52E5Q8NH55 327 aa6.91□□□□□ -1.3
SF3A1-210ENST00000498259 CLDND2Q8NHS1 167 aa6.91□□□□□ -1.3
SF3A1-210ENST00000498259 LEAP2Q969E1 77 aa6.91□□□□□ -1.3
SF3A1-210ENST00000498259 GPR146Q96CH1 333 aa6.91□□□□□ -1.3
SF3A1-210ENST00000498259 HIPK2Q9H2X6 1198 aa6.91□□□□□ -1.3
SF3A1-210ENST00000498259 NARFLQ9H6Q4 476 aa6.91□□□□□ -1.3
SF3A1-210ENST00000498259 CACNG5Q9UF02 275 aa6.91□□□□□ -1.3
SF3A1-210ENST00000498259 PRNDQ9UKY0 176 aa6.91□□□□□ -1.3
SF3A1-210ENST00000498259 WASHC3Q9Y3C0 194 aa6.91□□□□□ -1.3
SF3A1-210ENST00000498259 INSIG2Q9Y5U4 225 aa6.91□□□□□ -1.3
SF3A1-210ENST00000498259 MINOS1-NBL1R4GNA1 71 aa6.91□□□□□ -1.3
SF3A1-210ENST00000498259 A0A1W2PPE3 182 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 LINC00473A8K010 186 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 G3V3Q6 166 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 RGS13O14921 159 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 SHOXO15266 292 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 SLC31A2O15432 143 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 BCL2L11O43521 198 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 SYNGR2O43760 224 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 RAMP3O60896 148 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 NDUFS7O75251 213 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 PITX3O75364 302 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 TOX4O94842 621 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 S1PR2O95136 353 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 CRYZL1O95825 349 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 IGLV1-47P01700 117 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 ARG1P05089 322 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 USF1P22415 310 aaPredicted RBP6.9□□□□□ -1.3
SF3A1-210ENST00000498259 G6PCP35575 357 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 CAV2P51636 162 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 ATP5IP56385 69 aaPredicted RBP6.9□□□□□ -1.3
SF3A1-210ENST00000498259 LMO4P61968 165 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 ARF6P62330 175 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 RPL30P62888 115 aaKnown RBP6.9□□□□□ -1.3
SF3A1-210ENST00000498259 UBA52P62987 128 aaKnown RBP6.9□□□□□ -1.3
SF3A1-210ENST00000498259 HBG1P69891 147 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 HBG2P69892 147 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 ZNF266Q14584 549 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 POU2AF1Q16633 256 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 CLEC12BQ2HXU8 276 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 VMA21Q3ZAQ7 101 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 Q5BKY6 102 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 KIAA2026Q5HYC2 2103 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 OR2B11Q5JQS5 317 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 ODF3L1Q8IXM7 274 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 OR8H3Q8N146 312 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 OR2C3Q8N628 320 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 OR8H1Q8NGG4 311 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 OR5AN1Q8NGI8 311 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 DDB2Q92466 427 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 PHYHIPLQ96FC7 376 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 PERPQ96FX8 193 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 RHOVQ96L33 236 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 GPHA2Q96T91 129 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 ZNF251Q9BRH9 671 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 RNF126Q9BV68 326 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 ENY2Q9NPA8 101 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 DPM3Q9P2X0 92 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 NUP50Q9UKX7 468 aa6.9□□□□□ -1.3
SF3A1-210ENST00000498259 TBL2Q9Y4P3 447 aaKnown RBP6.9□□□□□ -1.3
SF3A1-210ENST00000498259 ZNF462Q96JM2 2506 aa6.9□□□□□ -1.31
SF3A1-210ENST00000498259 RAI1Q7Z5J4 1906 aaPredicted RBP6.89□□□□□ -1.31
SF3A1-210ENST00000498259 B4DSR2 109 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 C22orf46C9J442 243 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 CHST1O43916 411 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 SSSCA1O60232 199 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 FCN3O75636 299 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 TSPAN9O75954 239 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 DFFBO76075 338 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 IFNA17P01571 189 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 IGKV1-39P01597 117 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 IGKV1-5P01602 117 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 IGKV1D-39P04432 117 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 CT45A6P0DMU7 189 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 CT45A5P0DMU8 189 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 CT45A7P0DMV0 189 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 TPT1P13693 172 aaKnown RBP6.89□□□□□ -1.31
SF3A1-210ENST00000498259 DVL1P1P54792 670 aaPredicted RBP6.89□□□□□ -1.31
SF3A1-210ENST00000498259 SPCS3P61009 180 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 UBE2KP61086 200 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 LCN2P80188 198 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 TNFRSF9Q07011 255 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 LAMTOR1Q6IAA8 161 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 TEX261Q6UWH6 196 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 PRSS57Q6UWY2 283 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 ZNF429Q86V71 674 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 ZNF295-AS1Q8N0V1 137 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 PNKDQ8N490 385 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 C11orf42Q8N5U0 333 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 ZNF383Q8NA42 475 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 LRRC20Q8TCA0 184 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 ST6GALNAC6Q969X2 333 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 MBD6Q96DN6 1003 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 SMIM8Q96KF7 97 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 HARBI1Q96MB7 349 aa6.89□□□□□ -1.31
SF3A1-210ENST00000498259 TSNAXQ99598 290 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms