RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 H0Y980 276 aa10.87□□□□□ -0.67
CPNE1-227ENST00000498056 MPPED1O15442 326 aa10.87□□□□□ -0.67
CPNE1-227ENST00000498056 TCF21O43680 179 aa10.87□□□□□ -0.67
CPNE1-227ENST00000498056 RAMP3O60896 148 aa10.87□□□□□ -0.67
CPNE1-227ENST00000498056 PTTG1O95997 202 aa10.87□□□□□ -0.67
CPNE1-227ENST00000498056 RRASP10301 218 aa10.87□□□□□ -0.67
CPNE1-227ENST00000498056 ANXA7P20073 488 aaKnown RBP10.87□□□□□ -0.67
CPNE1-227ENST00000498056 VAMP1P23763 118 aa10.87□□□□□ -0.67
CPNE1-227ENST00000498056 RAB25P57735 213 aa10.87□□□□□ -0.67
CPNE1-227ENST00000498056 HILS1P60008 231 aa10.87□□□□□ -0.67
CPNE1-227ENST00000498056 TUSC1Q2TAM9 212 aa10.87□□□□□ -0.67
CPNE1-227ENST00000498056 DHRS7BQ6IAN0 325 aaPredicted RBP10.87□□□□□ -0.67
CPNE1-227ENST00000498056 EAF1Q96JC9 268 aaPredicted RBP10.87□□□□□ -0.67
CPNE1-227ENST00000498056 JMJD8Q96S16 334 aa10.87□□□□□ -0.67
CPNE1-227ENST00000498056 TP53RKQ96S44 253 aa10.87□□□□□ -0.67
CPNE1-227ENST00000498056 SLC25A33Q9BSK2 321 aa10.87□□□□□ -0.67
CPNE1-227ENST00000498056 CHIAQ9BZP6 476 aa10.87□□□□□ -0.67
CPNE1-227ENST00000498056 ESM1Q9NQ30 184 aa10.87□□□□□ -0.67
CPNE1-227ENST00000498056 NUBP2Q9Y5Y2 271 aa10.87□□□□□ -0.67
CPNE1-227ENST00000498056 POMT1Q9Y6A1 747 aa10.87□□□□□ -0.67
CPNE1-227ENST00000498056 A6NDX4 124 aa10.86□□□□□ -0.67
CPNE1-227ENST00000498056 FAM90A9PA6NNJ1 464 aa10.86□□□□□ -0.67
CPNE1-227ENST00000498056 SHOXO15266 292 aa10.86□□□□□ -0.67
CPNE1-227ENST00000498056 PLXNB1O43157 2135 aa10.86□□□□□ -0.67
CPNE1-227ENST00000498056 S1PR2O95136 353 aa10.86□□□□□ -0.67
CPNE1-227ENST00000498056 OR5AC1P0C628 307 aa10.86□□□□□ -0.67
CPNE1-227ENST00000498056 CNTFRP26992 372 aa10.86□□□□□ -0.67
CPNE1-227ENST00000498056 RPS16P62249 146 aaKnown RBP10.86□□□□□ -0.67
CPNE1-227ENST00000498056 TAGLNQ01995 201 aaKnown RBP10.86□□□□□ -0.67
CPNE1-227ENST00000498056 SLC9A3R2Q15599 337 aa10.86□□□□□ -0.67
CPNE1-227ENST00000498056 RGS21Q2M5E4 152 aa10.86□□□□□ -0.67
CPNE1-227ENST00000498056 TRIM16LQ309B1 348 aa10.86□□□□□ -0.67
CPNE1-227ENST00000498056 PLET1Q6UQ28 207 aa10.86□□□□□ -0.67
CPNE1-227ENST00000498056 SGPP2Q8IWX5 399 aa10.86□□□□□ -0.67
CPNE1-227ENST00000498056 TMEM86BQ8N661 226 aa10.86□□□□□ -0.67
CPNE1-227ENST00000498056 OR4C13Q8NGP0 309 aa10.86□□□□□ -0.67
CPNE1-227ENST00000498056 PIFOQ8TCI5 191 aa10.86□□□□□ -0.67
CPNE1-227ENST00000498056 FLYWCH2Q96CP2 140 aaKnown RBP10.86□□□□□ -0.67
CPNE1-227ENST00000498056 KIAA1456Q9P272 454 aa10.86□□□□□ -0.67
CPNE1-227ENST00000498056 MOB4Q9Y3A3 225 aa10.86□□□□□ -0.67
CPNE1-227ENST00000498056 NCBP2LA6PVI3 153 aaKnown RBP10.85□□□□□ -0.67
CPNE1-227ENST00000498056 CHST1O43916 411 aa10.85□□□□□ -0.67
CPNE1-227ENST00000498056 GPR137BO60478 399 aa10.85□□□□□ -0.67
CPNE1-227ENST00000498056 OR2F2O95006 317 aa10.85□□□□□ -0.67
CPNE1-227ENST00000498056 HLA-AP01891 365 aaKnown RBP10.85□□□□□ -0.67
CPNE1-227ENST00000498056 SERPINE2P07093 398 aa10.85□□□□□ -0.67
CPNE1-227ENST00000498056 H2AFB2P0C5Z0 115 aa10.85□□□□□ -0.67
CPNE1-227ENST00000498056 ANXA3P12429 323 aa10.85□□□□□ -0.67
CPNE1-227ENST00000498056 SPNP16150 400 aa10.85□□□□□ -0.67
CPNE1-227ENST00000498056 PPP1R1AQ13522 171 aa10.85□□□□□ -0.67
CPNE1-227ENST00000498056 PLGLAQ15195 96 aa10.85□□□□□ -0.67
CPNE1-227ENST00000498056 SP6Q3SY56 376 aa10.85□□□□□ -0.67
CPNE1-227ENST00000498056 C4orf46Q504U0 113 aa10.85□□□□□ -0.67
CPNE1-227ENST00000498056 C11orf88Q6PI97 169 aa10.85□□□□□ -0.67
CPNE1-227ENST00000498056 CCBE1Q6UXH8 406 aaPredicted RBP10.85□□□□□ -0.67
CPNE1-227ENST00000498056 LIAT1Q6ZQX7 453 aa10.85□□□□□ -0.67
CPNE1-227ENST00000498056 CASTOR1Q8WTX7 329 aa10.85□□□□□ -0.67
CPNE1-227ENST00000498056 PRR13Q9NZ81 148 aa10.85□□□□□ -0.67
CPNE1-227ENST00000498056 COMMD9Q9P000 198 aa10.85□□□□□ -0.67
CPNE1-227ENST00000498056 NBR2O15453 112 aa10.84□□□□□ -0.67
CPNE1-227ENST00000498056 RBFOX2O43251 390 aaKnown RBP eCLIP10.84□□□□□ -0.677e-7■□□□□ 10.1
CPNE1-227ENST00000498056 SLC25A17O43808 307 aa10.84□□□□□ -0.67
CPNE1-227ENST00000498056 IFNA2P01563 188 aa10.84□□□□□ -0.67
CPNE1-227ENST00000498056 OR4E1P0C645 316 aa10.84□□□□□ -0.67
CPNE1-227ENST00000498056 VSIG10L2P0DP72 767 aa10.84□□□□□ -0.67
CPNE1-227ENST00000498056 RPA2P15927 270 aa10.84□□□□□ -0.67
CPNE1-227ENST00000498056 BRWD1-AS2P59051 145 aa10.84□□□□□ -0.67
CPNE1-227ENST00000498056 ERVK-16P61578 105 aa10.84□□□□□ -0.67
CPNE1-227ENST00000498056 UBA52P62987 128 aaKnown RBP10.84□□□□□ -0.67
CPNE1-227ENST00000498056 SRSF2Q01130 221 aaKnown RBP10.84□□□□□ -0.67
CPNE1-227ENST00000498056 EBI3Q14213 229 aa10.84□□□□□ -0.67
CPNE1-227ENST00000498056 TMEM177Q53S58 311 aa10.84□□□□□ -0.67
CPNE1-227ENST00000498056 TMEM128Q5BJH2 165 aa10.84□□□□□ -0.67
CPNE1-227ENST00000498056 SSX9Q7RTT3 188 aa10.84□□□□□ -0.67
CPNE1-227ENST00000498056 SLC25A42Q86VD7 318 aa10.84□□□□□ -0.67
CPNE1-227ENST00000498056 THNSL2Q86YJ6 484 aa10.84□□□□□ -0.67
CPNE1-227ENST00000498056 Q8N6K4 173 aa10.84□□□□□ -0.67
CPNE1-227ENST00000498056 TCTEX1D1Q8N7M0 179 aa10.84□□□□□ -0.67
CPNE1-227ENST00000498056 RNASE11Q8TAA1 199 aaKnown RBP10.84□□□□□ -0.67
CPNE1-227ENST00000498056 OSR1Q8TAX0 266 aaPredicted RBP10.84□□□□□ -0.67
CPNE1-227ENST00000498056 CD300LFQ8TDQ1 290 aa10.84□□□□□ -0.67
CPNE1-227ENST00000498056 RBM14Q96PK6 669 aaKnown RBP10.84□□□□□ -0.67
CPNE1-227ENST00000498056 TSNAXQ99598 290 aaKnown RBP10.84□□□□□ -0.67
CPNE1-227ENST00000498056 RAB18Q9NP72 206 aa10.84□□□□□ -0.67
CPNE1-227ENST00000498056 TNCP24821 2201 aa10.83□□□□□ -0.68
CPNE1-227ENST00000498056 B3GALNT1O75752 331 aa10.83□□□□□ -0.68
CPNE1-227ENST00000498056 SPDEFO95238 335 aa10.83□□□□□ -0.68
CPNE1-227ENST00000498056 HPRT1P00492 218 aa10.83□□□□□ -0.68
CPNE1-227ENST00000498056 RNASE1P07998 156 aaKnown RBP10.83□□□□□ -0.68
CPNE1-227ENST00000498056 SAA1P0DJI8 122 aaPredicted RBP10.83□□□□□ -0.68
CPNE1-227ENST00000498056 LPAR6P43657 344 aa10.83□□□□□ -0.68
CPNE1-227ENST00000498056 AKR1C2P52895 323 aa10.83□□□□□ -0.68
CPNE1-227ENST00000498056 UBE2MP61081 183 aaKnown RBP10.83□□□□□ -0.68
CPNE1-227ENST00000498056 SUPT4H1P63272 117 aaKnown RBP10.83□□□□□ -0.68
CPNE1-227ENST00000498056 VMA21Q3ZAQ7 101 aa10.83□□□□□ -0.68
CPNE1-227ENST00000498056 C16orf82Q7Z2V1 217 aa10.83□□□□□ -0.68
CPNE1-227ENST00000498056 VKORC1L1Q8N0U8 176 aa10.83□□□□□ -0.68
CPNE1-227ENST00000498056 DMBX1Q8NFW5 382 aa10.83□□□□□ -0.68
CPNE1-227ENST00000498056 R3HDM4Q96D70 268 aa10.83□□□□□ -0.68
CPNE1-227ENST00000498056 RITA1Q96K30 269 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms