RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 NMNAT3Q96T66 252 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 C8orf4Q9NR00 106 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 CHMP5Q9NZZ3 219 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 TAAR3PQ9P1P4 343 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 RBM7Q9Y580 266 aaKnown RBP0.56□□□□□ -2.32
SMC4-227ENST00000497984 MYO5BQ9ULV0 1848 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 LRPPRCP42704 1394 aaKnown RBP0.56□□□□□ -2.32
SMC4-227ENST00000497984 GRIN2BQ13224 1484 aa0.55□□□□□ -2.32
SMC4-227ENST00000497984 OR6C6A6NF89 314 aa0.55□□□□□ -2.32
SMC4-227ENST00000497984 DEFA4P12838 97 aa0.55□□□□□ -2.32
SMC4-227ENST00000497984 IL9P15248 144 aa0.55□□□□□ -2.32
SMC4-227ENST00000497984 RPL27AP46776 148 aaKnown RBP0.55□□□□□ -2.32
SMC4-227ENST00000497984 TMEM33P57088 247 aa0.55□□□□□ -2.32
SMC4-227ENST00000497984 TBPL1P62380 186 aa0.55□□□□□ -2.32
SMC4-227ENST00000497984 BTN3A2P78410 334 aa0.55□□□□□ -2.32
SMC4-227ENST00000497984 GNA12Q03113 381 aa0.55□□□□□ -2.32
SMC4-227ENST00000497984 GNA13Q14344 377 aa0.55□□□□□ -2.32
SMC4-227ENST00000497984 SLC36A2Q495M3 483 aa0.55□□□□□ -2.32
SMC4-227ENST00000497984 TMEM42Q69YG0 159 aa0.55□□□□□ -2.32
SMC4-227ENST00000497984 GPHB5Q86YW7 130 aa0.55□□□□□ -2.32
SMC4-227ENST00000497984 CRLF3Q8IUI8 442 aa0.55□□□□□ -2.32
SMC4-227ENST00000497984 LFNGQ8NES3 379 aa0.55□□□□□ -2.32
SMC4-227ENST00000497984 OR5L1Q8NGL2 311 aa0.55□□□□□ -2.32
SMC4-227ENST00000497984 ZNF675Q8TD23 568 aa0.55□□□□□ -2.32
SMC4-227ENST00000497984 MS4A6EQ96DS6 147 aa0.55□□□□□ -2.32
SMC4-227ENST00000497984 RBP7Q96R05 134 aa0.55□□□□□ -2.32
SMC4-227ENST00000497984 TMEM222Q9H0R3 208 aa0.55□□□□□ -2.32
SMC4-227ENST00000497984 TP53TG1Q9Y2A0 90 aa0.55□□□□□ -2.32
SMC4-227ENST00000497984 PCYT1BQ9Y5K3 369 aaPredicted RBP0.55□□□□□ -2.32
SMC4-227ENST00000497984 TMED7-TICAM2A0A0A6YYA0 188 aa0.54□□□□□ -2.32
SMC4-227ENST00000497984 IQCF5A8MTL0 148 aa0.54□□□□□ -2.32
SMC4-227ENST00000497984 C9JCJ5 164 aa0.54□□□□□ -2.32
SMC4-227ENST00000497984 F8VZ95 297 aa0.54□□□□□ -2.32
SMC4-227ENST00000497984 CCRL2O00421 344 aa0.54□□□□□ -2.32
SMC4-227ENST00000497984 TOX3O15405 576 aaPredicted RBP0.54□□□□□ -2.32
SMC4-227ENST00000497984 SCN2BO60939 215 aa0.54□□□□□ -2.32
SMC4-227ENST00000497984 CIAO1O76071 339 aa0.54□□□□□ -2.32
SMC4-227ENST00000497984 ATP6V1G2O95670 118 aa0.54□□□□□ -2.32
SMC4-227ENST00000497984 MT-CO2P00403 227 aa0.54□□□□□ -2.32
SMC4-227ENST00000497984 ORM1P02763 201 aa0.54□□□□□ -2.32
SMC4-227ENST00000497984 PRB4P10163 310 aaPredicted RBP0.54□□□□□ -2.32
SMC4-227ENST00000497984 AQP4P55087 323 aa0.54□□□□□ -2.32
SMC4-227ENST00000497984 CTBP2P56545 445 aa0.54□□□□□ -2.32
SMC4-227ENST00000497984 CTAG1AP78358 180 aa0.54□□□□□ -2.32
SMC4-227ENST00000497984 FABP5Q01469 135 aa0.54□□□□□ -2.32
SMC4-227ENST00000497984 DNAL1Q4LDG9 190 aa0.54□□□□□ -2.32
SMC4-227ENST00000497984 SAPCD1Q5SSQ6 148 aa0.54□□□□□ -2.32
SMC4-227ENST00000497984 LYZL1Q6UWQ5 148 aa0.54□□□□□ -2.32
SMC4-227ENST00000497984 FP248Q71RG6 208 aaPredicted RBP0.54□□□□□ -2.32
SMC4-227ENST00000497984 KTN1-AS1Q86SY8 53 aa0.54□□□□□ -2.32
SMC4-227ENST00000497984 SLC37A2Q8TED4 501 aa0.54□□□□□ -2.32
SMC4-227ENST00000497984 IMMP2LQ96T52 175 aa0.54□□□□□ -2.32
SMC4-227ENST00000497984 TMEM109Q9BVC6 243 aa0.54□□□□□ -2.32
SMC4-227ENST00000497984 NSRP1Q9H0G5 558 aaKnown RBP0.54□□□□□ -2.32
SMC4-227ENST00000497984 NRBP2Q9NSY0 501 aa0.54□□□□□ -2.32
SMC4-227ENST00000497984 ABCC12Q96J65 1359 aa0.54□□□□□ -2.32
SMC4-227ENST00000497984 RIMS2Q9UQ26 1411 aa0.54□□□□□ -2.32
SMC4-227ENST00000497984 REREQ9P2R6 1566 aa0.53□□□□□ -2.32
SMC4-227ENST00000497984 IGKV3-7A0A075B6H7 116 aa0.53□□□□□ -2.32
SMC4-227ENST00000497984 MEIKINA0A087WXM9 373 aa0.53□□□□□ -2.32
SMC4-227ENST00000497984 IGHV1-18A0A0C4DH31 117 aa0.53□□□□□ -2.32
SMC4-227ENST00000497984 FTCDNL1E5RQL4 147 aa0.53□□□□□ -2.32
SMC4-227ENST00000497984 PLA2G10O15496 165 aa0.53□□□□□ -2.32
SMC4-227ENST00000497984 KLRC4O43908 158 aa0.53□□□□□ -2.32
SMC4-227ENST00000497984 MRPS14O60783 128 aaKnown RBP0.53□□□□□ -2.32
SMC4-227ENST00000497984 CA5AP35218 305 aa0.53□□□□□ -2.32
SMC4-227ENST00000497984 AKR1C3P42330 323 aa0.53□□□□□ -2.32
SMC4-227ENST00000497984 PLCXD2Q0VAA5 305 aa0.53□□□□□ -2.32
SMC4-227ENST00000497984 MOGQ16653 247 aa0.53□□□□□ -2.32
SMC4-227ENST00000497984 MIAQ16674 131 aa0.53□□□□□ -2.32
SMC4-227ENST00000497984 OR13C8Q8NGS7 320 aa0.53□□□□□ -2.32
SMC4-227ENST00000497984 MS4A6AQ9H2W1 248 aa0.53□□□□□ -2.32
SMC4-227ENST00000497984 A0A1W2PP64 1363 aa0.53□□□□□ -2.32
SMC4-227ENST00000497984 TRAV7A0A075B6U4 112 aa0.52□□□□□ -2.33
SMC4-227ENST00000497984 A0A0D9SEW6 157 aa0.52□□□□□ -2.33
SMC4-227ENST00000497984 TMEM213A2RRL7 107 aa0.52□□□□□ -2.33
SMC4-227ENST00000497984 TRPC5OSA6NMA1 111 aa0.52□□□□□ -2.33
SMC4-227ENST00000497984 HMSDA8MTL9 139 aa0.52□□□□□ -2.33
SMC4-227ENST00000497984 CRPP02741 224 aa0.52□□□□□ -2.33
SMC4-227ENST00000497984 IL6P05231 212 aa0.52□□□□□ -2.33
SMC4-227ENST00000497984 HLA-DQB2P05538 268 aa0.52□□□□□ -2.33
SMC4-227ENST00000497984 SERPINA7P05543 415 aa0.52□□□□□ -2.33
SMC4-227ENST00000497984 LGALS1P09382 135 aaKnown RBP0.52□□□□□ -2.33
SMC4-227ENST00000497984 TPI1P60174 286 aa0.52□□□□□ -2.33
SMC4-227ENST00000497984 RPS24P62847 133 aaKnown RBP0.52□□□□□ -2.33
SMC4-227ENST00000497984 HLA-DRB3P79483 266 aa0.52□□□□□ -2.33
SMC4-227ENST00000497984 HOXC5Q00444 222 aa0.52□□□□□ -2.33
SMC4-227ENST00000497984 JOSD1Q15040 202 aaPredicted RBP0.52□□□□□ -2.33
SMC4-227ENST00000497984 ANGPT1Q15389 498 aa0.52□□□□□ -2.33
SMC4-227ENST00000497984 C7orf65Q6ZTY9 151 aa0.52□□□□□ -2.33
SMC4-227ENST00000497984 SLC36A1Q7Z2H8 476 aa0.52□□□□□ -2.33
SMC4-227ENST00000497984 SYCE1Q8N0S2 351 aa0.52□□□□□ -2.33
SMC4-227ENST00000497984 C15orf53Q8NAA6 179 aa0.52□□□□□ -2.33
SMC4-227ENST00000497984 RAB2BQ8WUD1 216 aa0.52□□□□□ -2.33
SMC4-227ENST00000497984 SLC7A6Q92536 515 aa0.52□□□□□ -2.33
SMC4-227ENST00000497984 C12orf43Q96C57 262 aaKnown RBP0.52□□□□□ -2.33
SMC4-227ENST00000497984 LRRC45Q96CN5 670 aa0.52□□□□□ -2.33
SMC4-227ENST00000497984 DOHHQ9BU89 302 aa0.52□□□□□ -2.33
SMC4-227ENST00000497984 TIPINQ9BVW5 301 aa0.52□□□□□ -2.33
SMC4-227ENST00000497984 SLC22A4Q9H015 551 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms