RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 FABP5Q01469 135 aa1.09□□□□□ -2.23
PSPC1-205ENST00000497722 AKR1C1Q04828 323 aa1.09□□□□□ -2.23
PSPC1-205ENST00000497722 EBPQ15125 230 aaKnown RBP1.09□□□□□ -2.23
PSPC1-205ENST00000497722 C4orf26Q17RF5 130 aa1.09□□□□□ -2.23
PSPC1-205ENST00000497722 TMEM155Q4W5P6 130 aa1.09□□□□□ -2.23
PSPC1-205ENST00000497722 TMEM42Q69YG0 159 aa1.09□□□□□ -2.23
PSPC1-205ENST00000497722 SPATA12Q7Z6I5 190 aa1.09□□□□□ -2.23
PSPC1-205ENST00000497722 KTN1-AS1Q86SY8 53 aa1.09□□□□□ -2.23
PSPC1-205ENST00000497722 NAA40Q86UY6 237 aa1.09□□□□□ -2.23
PSPC1-205ENST00000497722 FUNDC1Q8IVP5 155 aa1.09□□□□□ -2.23
PSPC1-205ENST00000497722 SMCR5Q8TEV8 140 aa1.09□□□□□ -2.23
PSPC1-205ENST00000497722 RAB2BQ8WUD1 216 aa1.09□□□□□ -2.23
PSPC1-205ENST00000497722 ANKRD36BP1Q96IX9 119 aa1.09□□□□□ -2.23
PSPC1-205ENST00000497722 GNB1LQ9BYB4 327 aa1.09□□□□□ -2.23
PSPC1-205ENST00000497722 SPACA1Q9HBV2 294 aa1.09□□□□□ -2.23
PSPC1-205ENST00000497722 FKBP14Q9NWM8 211 aa1.09□□□□□ -2.23
PSPC1-205ENST00000497722 POLR3HQ9Y535 204 aaPredicted RBP1.09□□□□□ -2.23
PSPC1-205ENST00000497722 CR1P17927 2039 aa1.09□□□□□ -2.24
PSPC1-205ENST00000497722 ARHGAP32A7KAX9 2087 aa1.09□□□□□ -2.24
PSPC1-205ENST00000497722 ADAMTSL1Q8N6G6 1762 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 SLX4Q8IY92 1834 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 IGKV1D-43A0A0B4J1Z2 117 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 OR6C6A6NF89 314 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 HMSDA8MTL9 139 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 ATP8B1O43520 1251 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 HPGDSO60760 199 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 SCN2BO60939 215 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 NDUFS6O75380 124 aaKnown RBP1.08□□□□□ -2.24
PSPC1-205ENST00000497722 CRPP02741 224 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 IL6P05231 212 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 CXCL2P19875 107 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 PSMB8P28062 276 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 IFNGR2P38484 337 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 CDC34P49427 236 aaPredicted RBP1.08□□□□□ -2.24
PSPC1-205ENST00000497722 RBM11P57052 281 aaKnown RBP1.08□□□□□ -2.24
PSPC1-205ENST00000497722 HLA-DRB3P79483 266 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 TPRXLQ17RH7 258 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 C9orf64Q5T6V5 341 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 DNM1P34Q6PK57 102 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 LYZL1Q6UWQ5 148 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 RASSF6Q6ZTQ3 369 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 HIST2H3AQ71DI3 136 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 CLDND2Q8NHS1 167 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 SLC37A2Q8TED4 501 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 DNAJB3Q8WWF6 145 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 PACRGQ96M98 296 aaPredicted RBP1.08□□□□□ -2.24
PSPC1-205ENST00000497722 DHRS9Q9BPW9 319 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 HSPB9Q9BQS6 159 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 TTTY13Q9BZ97 58 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 HES4Q9HCC6 221 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 AMMECR1Q9Y4X0 333 aaPredicted RBP1.08□□□□□ -2.24
PSPC1-205ENST00000497722 SOX21Q9Y651 276 aaPredicted RBP1.08□□□□□ -2.24
PSPC1-205ENST00000497722 A0A1W2PP64 1363 aa1.08□□□□□ -2.24
PSPC1-205ENST00000497722 TMEM269A0A1B0GVZ9 245 aa1.07□□□□□ -2.24
PSPC1-205ENST00000497722 IQCF5A8MTL0 148 aa1.07□□□□□ -2.24
PSPC1-205ENST00000497722 A8MUN3 132 aa1.07□□□□□ -2.24
PSPC1-205ENST00000497722 F8W036 122 aa1.07□□□□□ -2.24
PSPC1-205ENST00000497722 SSNA1O43805 119 aa1.07□□□□□ -2.24
PSPC1-205ENST00000497722 CALUO43852 315 aaPredicted RBP1.07□□□□□ -2.24
PSPC1-205ENST00000497722 PGLYRP1O75594 196 aaPredicted RBP1.07□□□□□ -2.24
PSPC1-205ENST00000497722 BRI3O95415 125 aa1.07□□□□□ -2.24
PSPC1-205ENST00000497722 IL9P15248 144 aa1.07□□□□□ -2.24
PSPC1-205ENST00000497722 CA5AP35218 305 aa1.07□□□□□ -2.24
PSPC1-205ENST00000497722 CLDN12P56749 244 aa1.07□□□□□ -2.24
PSPC1-205ENST00000497722 TPI1P60174 286 aa1.07□□□□□ -2.24
PSPC1-205ENST00000497722 SNAP25P60880 206 aa1.07□□□□□ -2.24
PSPC1-205ENST00000497722 JOSD1Q15040 202 aaPredicted RBP1.07□□□□□ -2.24
PSPC1-205ENST00000497722 ZNF791Q3KP31 576 aaPredicted RBP1.07□□□□□ -2.24
PSPC1-205ENST00000497722 SLC36A2Q495M3 483 aa1.07□□□□□ -2.24
PSPC1-205ENST00000497722 OR10K2Q6IF99 312 aa1.07□□□□□ -2.24
PSPC1-205ENST00000497722 PLEKHG7Q6ZR37 379 aa1.07□□□□□ -2.24
PSPC1-205ENST00000497722 CD302Q8IX05 232 aa1.07□□□□□ -2.24
PSPC1-205ENST00000497722 RIBC1Q8N443 379 aaPredicted RBP1.07□□□□□ -2.24
PSPC1-205ENST00000497722 SLC22A4Q9H015 551 aa1.07□□□□□ -2.24
PSPC1-205ENST00000497722 DRC3Q9H069 523 aa1.07□□□□□ -2.24
PSPC1-205ENST00000497722 MS4A6AQ9H2W1 248 aa1.07□□□□□ -2.24
PSPC1-205ENST00000497722 FAM96AQ9H5X1 160 aa1.07□□□□□ -2.24
PSPC1-205ENST00000497722 TP53TG1Q9Y2A0 90 aa1.07□□□□□ -2.24
PSPC1-205ENST00000497722 PLCH2O75038 1416 aa1.06□□□□□ -2.24
PSPC1-205ENST00000497722 IGKV2-40A0A087WW87 121 aaPredicted RBP1.06□□□□□ -2.24
PSPC1-205ENST00000497722 TRAV38-1A0A0B4J264 116 aa1.06□□□□□ -2.24
PSPC1-205ENST00000497722 ZNF705FA8MVS1 300 aaPredicted RBP1.06□□□□□ -2.24
PSPC1-205ENST00000497722 ORC5O43913 435 aa1.06□□□□□ -2.24
PSPC1-205ENST00000497722 IGKV2D-40P01614 121 aaPredicted RBP1.06□□□□□ -2.24
PSPC1-205ENST00000497722 HIST1H1CP16403 213 aaKnown RBP1.06□□□□□ -2.24
PSPC1-205ENST00000497722 CD40LGP29965 261 aa1.06□□□□□ -2.24
PSPC1-205ENST00000497722 AKR1C3P42330 323 aa1.06□□□□□ -2.24
PSPC1-205ENST00000497722 HIST1H4AP62805 103 aaKnown RBP1.06□□□□□ -2.24
PSPC1-205ENST00000497722 SKP1P63208 163 aa1.06□□□□□ -2.24
PSPC1-205ENST00000497722 MIAQ16674 131 aa1.06□□□□□ -2.24
PSPC1-205ENST00000497722 Q6ZRN7 208 aaPredicted RBP1.06□□□□□ -2.24
PSPC1-205ENST00000497722 SLC36A1Q7Z2H8 476 aa1.06□□□□□ -2.24
PSPC1-205ENST00000497722 TMEM86AQ8N2M4 240 aa1.06□□□□□ -2.24
PSPC1-205ENST00000497722 TBC1D19Q8N5T2 526 aa1.06□□□□□ -2.24
PSPC1-205ENST00000497722 ZNF675Q8TD23 568 aa1.06□□□□□ -2.24
PSPC1-205ENST00000497722 ASB13Q8WXK3 278 aa1.06□□□□□ -2.24
PSPC1-205ENST00000497722 IMMP2LQ96T52 175 aa1.06□□□□□ -2.24
PSPC1-205ENST00000497722 DERL2Q9GZP9 239 aa1.06□□□□□ -2.24
PSPC1-205ENST00000497722 VCX3BQ9H321 246 aa1.06□□□□□ -2.24
PSPC1-205ENST00000497722 NAT8Q9UHE5 227 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms