RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 CDK9P50750 372 aaKnown RBP1.71□□□□□ -2.14
SMC4-225ENST00000497203 CTBP2P56545 445 aa1.71□□□□□ -2.14
SMC4-225ENST00000497203 RBM11P57052 281 aaKnown RBP1.71□□□□□ -2.14
SMC4-225ENST00000497203 TBPL1P62380 186 aa1.71□□□□□ -2.14
SMC4-225ENST00000497203 FKBP1AP62942 108 aaKnown RBP1.71□□□□□ -2.14
SMC4-225ENST00000497203 LGALS9CQ6DKI2 356 aa1.71□□□□□ -2.14
SMC4-225ENST00000497203 GLT6D1Q7Z4J2 308 aa1.71□□□□□ -2.14
SMC4-225ENST00000497203 DAND5Q8N907 189 aa1.71□□□□□ -2.14
SMC4-225ENST00000497203 TMEM161BQ8NDZ6 487 aa1.71□□□□□ -2.14
SMC4-225ENST00000497203 OR4X1Q8NH49 305 aa1.71□□□□□ -2.14
SMC4-225ENST00000497203 RPS4Y2Q8TD47 263 aa1.71□□□□□ -2.14
SMC4-225ENST00000497203 TXNDC17Q9BRA2 123 aa1.71□□□□□ -2.14
SMC4-225ENST00000497203 Q9BRP9 147 aa1.71□□□□□ -2.14
SMC4-225ENST00000497203 PECRQ9BY49 303 aa1.71□□□□□ -2.14
SMC4-225ENST00000497203 CXCL16Q9H2A7 254 aa1.71□□□□□ -2.14
SMC4-225ENST00000497203 OR51I2Q9H344 312 aa1.71□□□□□ -2.14
SMC4-225ENST00000497203 FAM215AQ9Y5M1 114 aa1.71□□□□□ -2.14
SMC4-225ENST00000497203 PLCH2O75038 1416 aa1.71□□□□□ -2.14
SMC4-225ENST00000497203 BAHCC1Q9P281 2608 aa1.7□□□□□ -2.14
SMC4-225ENST00000497203 C11orf86A6NJI1 115 aa1.7□□□□□ -2.14
SMC4-225ENST00000497203 DISC1C4P0D8 188 aa1.7□□□□□ -2.14
SMC4-225ENST00000497203 APOMO95445 188 aa1.7□□□□□ -2.14
SMC4-225ENST00000497203 NPYP01303 97 aa1.7□□□□□ -2.14
SMC4-225ENST00000497203 PLXNA3P51805 1871 aa1.7□□□□□ -2.14
SMC4-225ENST00000497203 AP2S1P53680 142 aaPredicted RBP1.7□□□□□ -2.14
SMC4-225ENST00000497203 SS18Q15532 418 aa1.7□□□□□ -2.14
SMC4-225ENST00000497203 PABPC1L2AQ5JQF8 200 aa1.7□□□□□ -2.14
SMC4-225ENST00000497203 CDKL4Q5MAI5 379 aa1.7□□□□□ -2.14
SMC4-225ENST00000497203 CLVS2Q5SYC1 327 aa1.7□□□□□ -2.14
SMC4-225ENST00000497203 C9orf84Q5VXU9 1444 aa1.7□□□□□ -2.14
SMC4-225ENST00000497203 SBSNQ6UWP8 590 aa1.7□□□□□ -2.14
SMC4-225ENST00000497203 RASSF6Q6ZTQ3 369 aa1.7□□□□□ -2.14
SMC4-225ENST00000497203 SLC35F6Q8N357 371 aa1.7□□□□□ -2.14
SMC4-225ENST00000497203 ZNF283Q8N7M2 679 aa1.7□□□□□ -2.14
SMC4-225ENST00000497203 Q8NDZ9 215 aa1.7□□□□□ -2.14
SMC4-225ENST00000497203 CLDND2Q8NHS1 167 aa1.7□□□□□ -2.14
SMC4-225ENST00000497203 RNF133Q8WVZ7 376 aa1.7□□□□□ -2.14
SMC4-225ENST00000497203 FGF13Q92913 245 aa1.7□□□□□ -2.14
SMC4-225ENST00000497203 TESCQ96BS2 214 aa1.7□□□□□ -2.14
SMC4-225ENST00000497203 C3orf18Q9UK00 162 aa1.7□□□□□ -2.14
SMC4-225ENST00000497203 ADAMTS7Q9UKP4 1686 aa1.7□□□□□ -2.14
SMC4-225ENST00000497203 NYNRINQ9P2P1 1898 aaKnown RBP1.69□□□□□ -2.14
SMC4-225ENST00000497203 SLX4Q8IY92 1834 aa1.69□□□□□ -2.14
SMC4-225ENST00000497203 A0A087WUU8 490 aa1.69□□□□□ -2.14
SMC4-225ENST00000497203 TMED7-TICAM2A0A0A6YYA0 188 aa1.69□□□□□ -2.14
SMC4-225ENST00000497203 C9JCJ5 164 aa1.69□□□□□ -2.14
SMC4-225ENST00000497203 ACOX3O15254 700 aa1.69□□□□□ -2.14
SMC4-225ENST00000497203 S1PR2O95136 353 aa1.69□□□□□ -2.14
SMC4-225ENST00000497203 KRT75O95678 551 aa1.69□□□□□ -2.14
SMC4-225ENST00000497203 ISG15P05161 165 aa1.69□□□□□ -2.14
SMC4-225ENST00000497203 ALOX5APP20292 161 aa1.69□□□□□ -2.14
SMC4-225ENST00000497203 HINT1P49773 126 aaPredicted RBP1.69□□□□□ -2.14
SMC4-225ENST00000497203 ZNF140P52738 457 aaPredicted RBP1.69□□□□□ -2.14
SMC4-225ENST00000497203 TAS2R20P59543 309 aa1.69□□□□□ -2.14
SMC4-225ENST00000497203 LGALS9BQ3B8N2 356 aa1.69□□□□□ -2.14
SMC4-225ENST00000497203 AGTRAPQ6RW13 159 aa1.69□□□□□ -2.14
SMC4-225ENST00000497203 C5orf46Q6UWT4 87 aa1.69□□□□□ -2.14
SMC4-225ENST00000497203 HIST2H3AQ71DI3 136 aa1.69□□□□□ -2.14
SMC4-225ENST00000497203 SPATA12Q7Z6I5 190 aa1.69□□□□□ -2.14
SMC4-225ENST00000497203 LHFPL1Q86WI0 220 aa1.69□□□□□ -2.14
SMC4-225ENST00000497203 OR13C8Q8NGS7 320 aa1.69□□□□□ -2.14
SMC4-225ENST00000497203 LHFPL5Q8TAF8 219 aa1.69□□□□□ -2.14
SMC4-225ENST00000497203 SMCR5Q8TEV8 140 aa1.69□□□□□ -2.14
SMC4-225ENST00000497203 RAB8BQ92930 207 aa1.69□□□□□ -2.14
SMC4-225ENST00000497203 SFRP2Q96HF1 295 aa1.69□□□□□ -2.14
SMC4-225ENST00000497203 CCL13Q99616 98 aa1.69□□□□□ -2.14
SMC4-225ENST00000497203 TTTY12Q9BZ98 90 aa1.69□□□□□ -2.14
SMC4-225ENST00000497203 PARVGQ9HBI0 331 aa1.69□□□□□ -2.14
SMC4-225ENST00000497203 SAMHD1Q9Y3Z3 626 aaKnown RBP1.69□□□□□ -2.14
SMC4-225ENST00000497203 TRGV5A0A0B4J1U4 118 aa1.68□□□□□ -2.14
SMC4-225ENST00000497203 A0A1W2PQD3 144 aa1.68□□□□□ -2.14
SMC4-225ENST00000497203 C21orf140B9A014 251 aa1.68□□□□□ -2.14
SMC4-225ENST00000497203 H3BRN7 92 aa1.68□□□□□ -2.14
SMC4-225ENST00000497203 TXNDC9O14530 226 aa1.68□□□□□ -2.14
SMC4-225ENST00000497203 NIPSNAP2O75323 286 aa1.68□□□□□ -2.14
SMC4-225ENST00000497203 DCTN3O75935 186 aa1.68□□□□□ -2.14
SMC4-225ENST00000497203 ZNF728P0DKX0 622 aa1.68□□□□□ -2.14
SMC4-225ENST00000497203 UCHL3P15374 230 aa1.68□□□□□ -2.14
SMC4-225ENST00000497203 FXYD7P58549 80 aa1.68□□□□□ -2.14
SMC4-225ENST00000497203 ZNF90Q03938 601 aa1.68□□□□□ -2.14
SMC4-225ENST00000497203 RSU1Q15404 277 aa1.68□□□□□ -2.14
SMC4-225ENST00000497203 C1orf195Q5TG92 126 aa1.68□□□□□ -2.14
SMC4-225ENST00000497203 PTRHD1Q6GMV3 140 aaKnown RBP1.68□□□□□ -2.14
SMC4-225ENST00000497203 CD200R1LQ6Q8B3 271 aa1.68□□□□□ -2.14
SMC4-225ENST00000497203 Q6ZS52 159 aa1.68□□□□□ -2.14
SMC4-225ENST00000497203 C10orf67Q8IYJ2 551 aa1.68□□□□□ -2.14
SMC4-225ENST00000497203 OR5J2Q8NH18 312 aa1.68□□□□□ -2.14
SMC4-225ENST00000497203 RAB2BQ8WUD1 216 aa1.68□□□□□ -2.14
SMC4-225ENST00000497203 GNPNAT1Q96EK6 184 aaPredicted RBP1.68□□□□□ -2.14
SMC4-225ENST00000497203 MRPS26Q9BYN8 205 aaKnown RBP1.68□□□□□ -2.14
SMC4-225ENST00000497203 TAAR3PQ9P1P4 343 aa1.68□□□□□ -2.14
SMC4-225ENST00000497203 KIF15Q9NS87 1388 aa1.68□□□□□ -2.14
SMC4-225ENST00000497203 GRIN2BQ13224 1484 aa1.68□□□□□ -2.14
SMC4-225ENST00000497203 SCN9AQ15858 1988 aa1.67□□□□□ -2.14
SMC4-225ENST00000497203 BHLHE40O14503 412 aa1.67□□□□□ -2.14
SMC4-225ENST00000497203 COX7A2LO14548 114 aa1.67□□□□□ -2.14
SMC4-225ENST00000497203 AHSA1O95433 338 aa1.67□□□□□ -2.14
SMC4-225ENST00000497203 IFI30P13284 250 aa1.67□□□□□ -2.14
SMC4-225ENST00000497203 RPS12P25398 132 aaKnown RBP1.67□□□□□ -2.14
SMC4-225ENST00000497203 SLCO1A2P46721 670 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms