RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 VAX2Q9UIW0 290 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 GAB2Q9UQC2 676 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 CFAP47Q6ZTR5 3102 aa9.18□□□□□ -0.94
CMSS1-208ENST00000496116 DMXL1Q9Y485 3027 aa9.18□□□□□ -0.94
CMSS1-208ENST00000496116 TRGV10A0A0A0MS01 117 aa9.18□□□□□ -0.94
CMSS1-208ENST00000496116 B4DEV8 164 aa9.18□□□□□ -0.94
CMSS1-208ENST00000496116 IRF2P14316 349 aa9.18□□□□□ -0.94
CMSS1-208ENST00000496116 NQO2P16083 231 aa9.18□□□□□ -0.94
CMSS1-208ENST00000496116 AGAP20933 346 aa9.18□□□□□ -0.94
CMSS1-208ENST00000496116 MAS1LP35410 378 aa9.18□□□□□ -0.94
CMSS1-208ENST00000496116 RPL35P42766 123 aaKnown RBP9.18□□□□□ -0.94
CMSS1-208ENST00000496116 RAB11AP62491 216 aa9.18□□□□□ -0.94
CMSS1-208ENST00000496116 PNRC1Q12796 327 aaPredicted RBP9.18□□□□□ -0.94
CMSS1-208ENST00000496116 PMS2P11Q13670 270 aa9.18□□□□□ -0.94
CMSS1-208ENST00000496116 VWC2Q2TAL6 325 aa9.18□□□□□ -0.94
CMSS1-208ENST00000496116 AARDQ4LEZ3 155 aa9.18□□□□□ -0.94
CMSS1-208ENST00000496116 TMEM108Q6UXF1 575 aa9.18□□□□□ -0.94
CMSS1-208ENST00000496116 SSX7Q7RTT5 188 aa9.18□□□□□ -0.94
CMSS1-208ENST00000496116 NUP37Q8NFH4 326 aa9.18□□□□□ -0.94
CMSS1-208ENST00000496116 LHX4Q969G2 390 aa9.18□□□□□ -0.94
CMSS1-208ENST00000496116 MALSU1Q96EH3 234 aa9.18□□□□□ -0.94
CMSS1-208ENST00000496116 SDSLQ96GA7 329 aa9.18□□□□□ -0.94
CMSS1-208ENST00000496116 QTRT1Q9BXR0 403 aaKnown RBP9.18□□□□□ -0.94
CMSS1-208ENST00000496116 IFI27L2Q9H2X8 130 aa9.18□□□□□ -0.94
CMSS1-208ENST00000496116 SIRT7Q9NRC8 400 aa9.18□□□□□ -0.94
CMSS1-208ENST00000496116 CADP27708 2225 aa9.18□□□□□ -0.94
CMSS1-208ENST00000496116 CXorf65A6NEN9 183 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 PROP1O75360 226 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 IGHV1-46P01743 117 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 OR9G9P0C7N8 305 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 ZNF134P52741 427 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 SPCS3P61009 180 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 RPP25LQ8N5L8 163 aaKnown RBP9.17□□□□□ -0.94
CMSS1-208ENST00000496116 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.17□□□□□ -0.94
CMSS1-208ENST00000496116 OR52E5Q8NH55 327 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 NPCDR1Q9BY65 106 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 FAM234AQ9H0X4 552 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 ELOVL5Q9NYP7 299 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 DOCK11Q5JSL3 2073 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 KBTBD11-OT1A0A1B0GTJ5 212 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 CTXND1A0A1B0GTU2 59 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 hCG_1809904A0A1W2PP81 198 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 A0A1W2PR64 198 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 A0A1W2PRV1 198 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 CGB3P0DN86 165 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 CGB7P0DN87 165 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 OR2B8PP59922 312 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 C17orf58Q2M2W7 97 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 RPL39P5Q59GN2 51 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 SPINK9Q5DT21 86 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 STUMQ69YW2 141 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 ADAM5Q6NVV9 412 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 ACSM6Q6P461 480 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 SSX9Q7RTT3 188 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 OR10G9Q8NGN4 311 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 OR10G7Q8NGN6 311 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 OR4S2Q8NH73 311 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 Q8TCH9 128 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 GFOD1Q9NXC2 390 aa9.17□□□□□ -0.94
CMSS1-208ENST00000496116 C16orf97H3BN30 126 aa9.16□□□□□ -0.94
CMSS1-208ENST00000496116 SOX15O60248 233 aa9.16□□□□□ -0.94
CMSS1-208ENST00000496116 IGHV3-7P01780 117 aa9.16□□□□□ -0.94
CMSS1-208ENST00000496116 HNF4GQ14541 408 aa9.16□□□□□ -0.94
CMSS1-208ENST00000496116 FFAR4Q5NUL3 377 aa9.16□□□□□ -0.94
CMSS1-208ENST00000496116 FAM201AQ5SY85 155 aa9.16□□□□□ -0.94
CMSS1-208ENST00000496116 FAM90A2PQ658T7 463 aa9.16□□□□□ -0.94
CMSS1-208ENST00000496116 SSX8Q7RTT4 187 aa9.16□□□□□ -0.94
CMSS1-208ENST00000496116 CA5BP1Q8WTZ4 195 aa9.16□□□□□ -0.94
CMSS1-208ENST00000496116 ABHD17AQ96GS6 310 aa9.16□□□□□ -0.94
CMSS1-208ENST00000496116 ZNF251Q9BRH9 671 aa9.16□□□□□ -0.94
CMSS1-208ENST00000496116 ACTR3CQ9C0K3 210 aaPredicted RBP9.16□□□□□ -0.94
CMSS1-208ENST00000496116 DSPP15924 2871 aaKnown RBP9.16□□□□□ -0.94
CMSS1-208ENST00000496116 ZNF292O60281 2723 aa9.16□□□□□ -0.94
CMSS1-208ENST00000496116 HCFC1P51610 2035 aa9.16□□□□□ -0.94
CMSS1-208ENST00000496116 C15orf62A8K5M9 175 aa9.16□□□□□ -0.94
CMSS1-208ENST00000496116 CYB5R3P00387 301 aaPredicted RBP9.16□□□□□ -0.94
CMSS1-208ENST00000496116 IFNA10P01566 189 aa9.16□□□□□ -0.94
CMSS1-208ENST00000496116 IGKV1D-33P01593 117 aa9.16□□□□□ -0.94
CMSS1-208ENST00000496116 IGKV1-33P01594 117 aa9.16□□□□□ -0.94
CMSS1-208ENST00000496116 TNFRSF1AP19438 455 aa9.16□□□□□ -0.94
CMSS1-208ENST00000496116 SNRPEP62304 92 aaKnown RBP9.16□□□□□ -0.94
CMSS1-208ENST00000496116 TMEM30BQ3MIR4 351 aa9.16□□□□□ -0.94
CMSS1-208ENST00000496116 PDLIM3Q53GG5 364 aaPredicted RBP9.16□□□□□ -0.94
CMSS1-208ENST00000496116 DOLPP1Q86YN1 238 aa9.16□□□□□ -0.94
CMSS1-208ENST00000496116 C1QL4Q86Z23 238 aa9.16□□□□□ -0.94
CMSS1-208ENST00000496116 DIRC2Q96SL1 478 aa9.16□□□□□ -0.94
CMSS1-208ENST00000496116 DSCAMO60469 2012 aa9.15□□□□□ -0.94
CMSS1-208ENST00000496116 A0A0G2JNJ9 132 aa9.15□□□□□ -0.94
CMSS1-208ENST00000496116 ZNF98A6NK75 572 aa9.15□□□□□ -0.94
CMSS1-208ENST00000496116 ZNF729A6NN14 1252 aaPredicted RBP9.15□□□□□ -0.94
CMSS1-208ENST00000496116 DLL1O00548 723 aa9.15□□□□□ -0.94
CMSS1-208ENST00000496116 CYB5BO43169 146 aa9.15□□□□□ -0.94
CMSS1-208ENST00000496116 SELLP14151 372 aa9.15□□□□□ -0.94
CMSS1-208ENST00000496116 CD1BP29016 333 aa9.15□□□□□ -0.94
CMSS1-208ENST00000496116 CCKARP32238 428 aa9.15□□□□□ -0.94
CMSS1-208ENST00000496116 PSMB3P49720 205 aa9.15□□□□□ -0.94
CMSS1-208ENST00000496116 THBS3P49746 956 aa9.15□□□□□ -0.94
CMSS1-208ENST00000496116 TFF3Q07654 80 aa9.15□□□□□ -0.94
CMSS1-208ENST00000496116 ACOT6Q3I5F7 207 aaPredicted RBP9.15□□□□□ -0.94
CMSS1-208ENST00000496116 HEPN1Q6WQI6 88 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms